RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 PBX1P40424 430 aa17.1■□□□□ 0.33
RGPD6-202ENST00000330331 TTMPQ5BVD1 217 aa17.1■□□□□ 0.33
RGPD6-202ENST00000330331 NBPF14Q5TI25 921 aa17.1■□□□□ 0.33
RGPD6-202ENST00000330331 ALG1Q9BT22 464 aa17.1■□□□□ 0.33
RGPD6-202ENST00000330331 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
RGPD6-202ENST00000330331 ADD3Q9UEY8 706 aaKnown RBP17.1■□□□□ 0.33
RGPD6-202ENST00000330331 TARSL2A2RTX5 802 aaKnown RBP17.1■□□□□ 0.33
RGPD6-202ENST00000330331 GOLGA8KD6RF30 607 aa17.1■□□□□ 0.33
RGPD6-202ENST00000330331 PLCD1P51178 756 aa17.1■□□□□ 0.33
RGPD6-202ENST00000330331 EPHA10Q5JZY3 1008 aa17.1■□□□□ 0.33
RGPD6-202ENST00000330331 ANKRD24Q8TF21 1146 aa17.1■□□□□ 0.33
RGPD6-202ENST00000330331 CHP1Q99653 195 aa17.1■□□□□ 0.33
RGPD6-202ENST00000330331 DDX20Q9UHI6 824 aaKnown RBP17.1■□□□□ 0.33
RGPD6-202ENST00000330331 CLNS1AP54105 237 aaKnown RBP17.09■□□□□ 0.33
RGPD6-202ENST00000330331 SF3B2Q13435 895 aaKnown RBP17.09■□□□□ 0.33
RGPD6-202ENST00000330331 EZH2Q15910 746 aaKnown RBP17.09■□□□□ 0.33
RGPD6-202ENST00000330331 BRINP3Q76B58 766 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
RGPD6-202ENST00000330331 ZMYM6O95789 1325 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 PDE2AO00408 941 aaPredicted RBP17.09■□□□□ 0.33
RGPD6-202ENST00000330331 PRC1O43663 620 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 SKAP2O75563 359 aaPredicted RBP17.09■□□□□ 0.33
RGPD6-202ENST00000330331 RXRAP19793 462 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 PPARDQ03181 441 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 E2F5Q15329 346 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 KRT40Q6A162 431 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 TBC1D22AQ8WUA7 517 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 DSCC1Q9BVC3 393 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 SLC40A1Q9NP59 571 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 ABHD10Q9NUJ1 306 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
RGPD6-202ENST00000330331 PHRF1Q9P1Y6 1649 aaKnown RBP17.09■□□□□ 0.33
RGPD6-202ENST00000330331 WLSQ5T9L3 541 aa17.08■□□□□ 0.33
RGPD6-202ENST00000330331 CCDC13Q8IYE1 715 aa17.08■□□□□ 0.33
RGPD6-202ENST00000330331 KBTBD3Q8NAB2 608 aa17.08■□□□□ 0.33
RGPD6-202ENST00000330331 HDAC7Q8WUI4 952 aa17.08■□□□□ 0.33
RGPD6-202ENST00000330331 HAUS7Q99871 368 aa17.08■□□□□ 0.33
RGPD6-202ENST00000330331 DBF4Q9UBU7 674 aaPredicted RBP17.08■□□□□ 0.33
RGPD6-202ENST00000330331 FAM184BQ9ULE4 1060 aa17.08■□□□□ 0.33
RGPD6-202ENST00000330331 REXO2Q9Y3B8 237 aaKnown RBP17.08■□□□□ 0.33
RGPD6-202ENST00000330331 PXDNQ92626 1479 aa17.08■□□□□ 0.32
RGPD6-202ENST00000330331 NAP1L1P55209 391 aaKnown RBP17.08■□□□□ 0.32
RGPD6-202ENST00000330331 IFT88Q13099 833 aa17.08■□□□□ 0.32
RGPD6-202ENST00000330331 FILIP1LQ4L180 1135 aa17.08■□□□□ 0.32
RGPD6-202ENST00000330331 CYP26C1Q6V0L0 522 aa17.08■□□□□ 0.32
RGPD6-202ENST00000330331 SMYD4Q8IYR2 804 aaPredicted RBP17.08■□□□□ 0.32
RGPD6-202ENST00000330331 AENQ8WTP8 325 aaKnown RBP17.08■□□□□ 0.32
RGPD6-202ENST00000330331 IP6K1Q92551 441 aa17.08■□□□□ 0.32
RGPD6-202ENST00000330331 PRAMEF22A3QJZ6 481 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 CD44P16070 742 aaKnown RBP17.07■□□□□ 0.32
RGPD6-202ENST00000330331 CASP1P29466 404 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 SARSP49591 514 aaKnown RBP17.07■□□□□ 0.32
RGPD6-202ENST00000330331 SMTNP53814 917 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 GUCY1A3Q02108 690 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 NAA35Q5VZE5 725 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 TSEN2Q8NCE0 465 aaKnown RBP17.07■□□□□ 0.32
RGPD6-202ENST00000330331 JAKMIP2Q96AA8 810 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 SCLT1Q96NL6 688 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 VCPKMTQ9H867 229 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 RASSF9O75901 435 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 PHKBQ93100 1093 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 AIDAQ96BJ3 306 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 TRIM6Q9C030 488 aaPredicted RBP17.07■□□□□ 0.32
RGPD6-202ENST00000330331 SH3TC1Q8TE82 1336 aa17.07■□□□□ 0.32
RGPD6-202ENST00000330331 OPA1O60313 960 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 CDR1P51861 262 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 SEC24CP53992 1094 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 SKOR1P84550 965 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 SPATA1Q5VX52 437 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 KRI1Q8N9T8 703 aaKnown RBP17.06■□□□□ 0.32
RGPD6-202ENST00000330331 RUFY1Q96T51 708 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 MED1Q15648 1581 aaPredicted RBP17.06■□□□□ 0.32
RGPD6-202ENST00000330331 RPSAP08865 295 aaKnown RBP17.06■□□□□ 0.32
RGPD6-202ENST00000330331 MICALCLQ6ZW33 695 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 LINS1Q8NG48 757 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 ZNF473Q8WTR7 871 aaKnown RBP17.06■□□□□ 0.32
RGPD6-202ENST00000330331 CCDC51Q96ER9 411 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 VPS16Q9H269 839 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 EPN1Q9Y6I3 576 aaPredicted RBP17.06■□□□□ 0.32
RGPD6-202ENST00000330331 PSMD14O00487 310 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 KRT9P35527 623 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 CCNHP51946 323 aaPredicted RBP17.06■□□□□ 0.32
RGPD6-202ENST00000330331 SLC7A5Q01650 507 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 APBA1Q02410 837 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 CRYMQ14894 314 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 FMNL3Q8IVF7 1028 aa17.06■□□□□ 0.32
RGPD6-202ENST00000330331 RNPC3Q96LT9 517 aaKnown RBP17.06■□□□□ 0.32
RGPD6-202ENST00000330331 DMGDHQ9UI17 866 aaKnown RBP17.06■□□□□ 0.32
RGPD6-202ENST00000330331 ATXN2Q99700 1313 aaKnown RBP17.05■□□□□ 0.32
RGPD6-202ENST00000330331 SYNRGQ9UMZ2 1314 aa17.05■□□□□ 0.32
RGPD6-202ENST00000330331 PALLDQ8WX93 1383 aa17.05■□□□□ 0.32
RGPD6-202ENST00000330331 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
RGPD6-202ENST00000330331 UBE2Q2LH0YL09 131 aa17.05■□□□□ 0.32
RGPD6-202ENST00000330331 MATR3P43243 847 aaKnown RBP eCLIP17.05■□□□□ 0.32
RGPD6-202ENST00000330331 SARNPP82979 210 aaKnown RBP17.05■□□□□ 0.32
RGPD6-202ENST00000330331 MAP2K1Q02750 393 aaPredicted RBP17.05■□□□□ 0.32
RGPD6-202ENST00000330331 CKAP4Q07065 602 aaKnown RBP17.05■□□□□ 0.32
RGPD6-202ENST00000330331 NAA25Q14CX7 972 aa17.05■□□□□ 0.32
RGPD6-202ENST00000330331 CCDC122Q5T0U0 273 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms