RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 FUT4P22083 530 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 PDE4BQ07343 736 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 ZNF792Q3KQV3 632 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 SFRP5Q5T4F7 317 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 SLC6A19Q695T7 634 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 PRDM7Q9NQW5 492 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 MBNL3Q9NUK0 354 aaKnown RBP6.2□□□□□ -1.42
SKP1-201ENST00000328392 UBP1Q9NZI7 540 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 MAPK8IP1Q9UQF2 711 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 SNX11Q9Y5W9 270 aa6.2□□□□□ -1.42
SKP1-201ENST00000328392 GNL2Q13823 731 aaKnown RBP6.19□□□□□ -1.42
SKP1-201ENST00000328392 CDKAL1Q5VV42 579 aa6.19□□□□□ -1.42
SKP1-201ENST00000328392 DNAJB8Q8NHS0 232 aa6.19□□□□□ -1.42
SKP1-201ENST00000328392 HSPA12BQ96MM6 686 aa6.19□□□□□ -1.42
SKP1-201ENST00000328392 TINF2Q9BSI4 451 aa6.19□□□□□ -1.42
SKP1-201ENST00000328392 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
SKP1-201ENST00000328392 ADAM30Q9UKF2 790 aa6.19□□□□□ -1.42
SKP1-201ENST00000328392 CAPN6Q9Y6Q1 641 aa6.19□□□□□ -1.42
SKP1-201ENST00000328392 PITPNM2Q9BZ72 1349 aa6.19□□□□□ -1.42
SKP1-201ENST00000328392 FAM155AB1AL88 458 aaPredicted RBP6.18□□□□□ -1.42
SKP1-201ENST00000328392 CHURC1-FNTBB4DL54 471 aa6.18□□□□□ -1.42
SKP1-201ENST00000328392 DNAJA2O60884 412 aa6.18□□□□□ -1.42
SKP1-201ENST00000328392 RNASE1P07998 156 aaKnown RBP6.18□□□□□ -1.42
SKP1-201ENST00000328392 ZNF865P0CJ78 1059 aaPredicted RBP6.18□□□□□ -1.42
SKP1-201ENST00000328392 APOBRQ0VD83 1088 aa6.18□□□□□ -1.42
SKP1-201ENST00000328392 MFSD4AQ8N468 514 aa6.18□□□□□ -1.42
SKP1-201ENST00000328392 FAM13CQ8NE31 585 aa6.18□□□□□ -1.42
SKP1-201ENST00000328392 PPP1R13LQ8WUF5 828 aa6.18□□□□□ -1.42
SKP1-201ENST00000328392 GPRASP2Q96D09 838 aa6.18□□□□□ -1.42
SKP1-201ENST00000328392 EAF1Q96JC9 268 aaPredicted RBP6.18□□□□□ -1.42
SKP1-201ENST00000328392 TANGO6Q9C0B7 1094 aa6.18□□□□□ -1.42
SKP1-201ENST00000328392 SEMA3GQ9NS98 782 aa6.18□□□□□ -1.42
SKP1-201ENST00000328392 REV1Q9UBZ9 1251 aa6.18□□□□□ -1.42
SKP1-201ENST00000328392 SUPT16HQ9Y5B9 1047 aaKnown RBP6.18□□□□□ -1.42
SKP1-201ENST00000328392 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
SKP1-201ENST00000328392 GREM1O60565 184 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 HTR3BO95264 441 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 MCM4P33991 863 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 CRKP46108 304 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 CLCN7P51798 805 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 IKZF1Q13422 519 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 SEZ6Q53EL9 994 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 TMEM201Q5SNT2 666 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 FAM196AQ6ZSG2 479 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 C22orf34Q6ZV56 151 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 REC114Q7Z4M0 266 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 PI4K2BQ8TCG2 481 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 C8orf37Q96NL8 207 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 ATP13A1Q9HD20 1204 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 KLHL3Q9UH77 587 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 ST14Q9Y5Y6 855 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 PRR36Q9H6K5 1346 aa6.17□□□□□ -1.42
SKP1-201ENST00000328392 WASH4PA8MWX3 477 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 H3BS24 57 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 ITGB5P18084 799 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 TNK2Q07912 1038 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 MPP2Q14168 576 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 ANGEL2Q5VTE6 544 aaKnown RBP6.16□□□□□ -1.42
SKP1-201ENST00000328392 FBXW10Q5XX13 1052 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 LRRN4CLQ8ND94 238 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 ASB11Q8WXH4 323 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 Q96M66 194 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 RC3H2Q9HBD1 1191 aaKnown RBP6.16□□□□□ -1.42
SKP1-201ENST00000328392 BRMS1Q9HCU9 246 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 KCNQ5Q9NR82 932 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 CEP131Q9UPN4 1083 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 EFR3BQ9Y2G0 817 aa6.16□□□□□ -1.42
SKP1-201ENST00000328392 KRTAP9-6A0A140TA67 174 aa6.15□□□□□ -1.42
SKP1-201ENST00000328392 PAPLNO95428 1278 aa6.15□□□□□ -1.42
SKP1-201ENST00000328392 NASPP49321 788 aaPredicted RBP6.15□□□□□ -1.42
SKP1-201ENST00000328392 ARID5AQ03989 594 aa6.15□□□□□ -1.42
SKP1-201ENST00000328392 ZP2Q05996 745 aa6.15□□□□□ -1.42
SKP1-201ENST00000328392 CCDC81Q6ZN84 652 aa6.15□□□□□ -1.42
SKP1-201ENST00000328392 VPS37DQ86XT2 251 aa6.15□□□□□ -1.42
SKP1-201ENST00000328392 BAHD1Q8TBE0 780 aaPredicted RBP6.15□□□□□ -1.42
SKP1-201ENST00000328392 SREK1Q8WXA9 508 aaKnown RBP6.15□□□□□ -1.42
SKP1-201ENST00000328392 GINM1Q9NU53 330 aa6.15□□□□□ -1.42
SKP1-201ENST00000328392 PAX4O43316 350 aa6.14□□□□□ -1.43
SKP1-201ENST00000328392 LRRN2O75325 713 aa6.14□□□□□ -1.43
SKP1-201ENST00000328392 GTF2F1P35269 517 aaKnown RBP eCLIP6.14□□□□□ -1.43
SKP1-201ENST00000328392 ETV3P41162 512 aa6.14□□□□□ -1.43
SKP1-201ENST00000328392 DIEXFQ68CQ4 756 aaKnown RBP6.14□□□□□ -1.43
SKP1-201ENST00000328392 ZNF746Q6NUN9 644 aaPredicted RBP6.14□□□□□ -1.43
SKP1-201ENST00000328392 CYB5D2Q8WUJ1 264 aa6.14□□□□□ -1.43
SKP1-201ENST00000328392 DHX38Q92620 1227 aaKnown RBP6.14□□□□□ -1.43
SKP1-201ENST00000328392 NKD1Q969G9 470 aa6.14□□□□□ -1.43
SKP1-201ENST00000328392 UBE2FQ969M7 185 aa6.14□□□□□ -1.43
SKP1-201ENST00000328392 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.14□□□□□ -1.43
SKP1-201ENST00000328392 CARS2Q9HA77 564 aaKnown RBP6.14□□□□□ -1.43
SKP1-201ENST00000328392 ZSWIM5Q9P217 1185 aa6.14□□□□□ -1.43
SKP1-201ENST00000328392 RNF114Q9Y508 228 aa6.14□□□□□ -1.43
SKP1-201ENST00000328392 PCDHB14Q9Y5E9 798 aa6.14□□□□□ -1.43
SKP1-201ENST00000328392 MRVI1Q9Y6F6 885 aa6.14□□□□□ -1.43
SKP1-201ENST00000328392 CYP7A1P22680 504 aa6.13□□□□□ -1.43
SKP1-201ENST00000328392 GJA8P48165 433 aa6.13□□□□□ -1.43
SKP1-201ENST00000328392 YARSP54577 528 aaKnown RBP6.13□□□□□ -1.43
SKP1-201ENST00000328392 SLC23A3Q6PIS1 610 aa6.13□□□□□ -1.43
SKP1-201ENST00000328392 GK5Q6ZS86 529 aa6.13□□□□□ -1.43
SKP1-201ENST00000328392 SLFN12Q8IYM2 578 aa6.13□□□□□ -1.43
SKP1-201ENST00000328392 CPLX3Q8WVH0 158 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms