RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 KAT14Q9H8E8 782 aa16.49■□□□□ 0.23
CHEK2-201ENST00000328354 DDX4Q9NQI0 724 aaKnown RBP16.49■□□□□ 0.23
CHEK2-201ENST00000328354 DDX19AQ9NUU7 478 aaKnown RBP16.49■□□□□ 0.23
CHEK2-201ENST00000328354 USP40Q9NVE5 1235 aa16.49■□□□□ 0.23
CHEK2-201ENST00000328354 CNTNAP5Q8WYK1 1306 aa16.49■□□□□ 0.23
CHEK2-201ENST00000328354 PLIN4Q96Q06 1357 aa16.49■□□□□ 0.23
CHEK2-201ENST00000328354 C21orf2O43822 256 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 NOVP48745 357 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 TPRNQ4KMQ1 711 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 BICD2Q8TD16 824 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 KCNG4Q8TDN1 519 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 PSMD1Q99460 953 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
CHEK2-201ENST00000328354 TSPY26PQ9H489 355 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 KIF5BP33176 963 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 AKAP17AQ02040 695 aaKnown RBP16.48■□□□□ 0.23
CHEK2-201ENST00000328354 ANO1Q5XXA6 986 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 RTKN2Q8IZC4 609 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 PNMA1Q8ND90 353 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 DACT1Q9NYF0 836 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 CLIC4Q9Y696 253 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 MYO3BQ8WXR4 1341 aa16.48■□□□□ 0.23
CHEK2-201ENST00000328354 GREB1LQ9C091 1923 aaPredicted RBP16.47■□□□□ 0.23
CHEK2-201ENST00000328354 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
CHEK2-201ENST00000328354 SRBD1Q8N5C6 995 aaKnown RBP16.47■□□□□ 0.23
CHEK2-201ENST00000328354 SGIP1Q9BQI5 828 aa16.47■□□□□ 0.23
CHEK2-201ENST00000328354 FUCA2Q9BTY2 467 aa16.47■□□□□ 0.23
CHEK2-201ENST00000328354 OSBPL5Q9H0X9 879 aaPredicted RBP16.47■□□□□ 0.23
CHEK2-201ENST00000328354 NUP62CLQ9H1M0 184 aa16.47■□□□□ 0.23
CHEK2-201ENST00000328354 A0A1W2PQ27 194 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 A0A1W2PQ64 194 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 A0A1W2PQD8 194 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 PPIP5K2O43314 1243 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 DPEP1P16444 411 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 XBP1P17861 261 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 GRM4Q14833 912 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 STK38Q15208 465 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 ADALQ6DHV7 355 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 RBM43Q6ZSC3 357 aaKnown RBP16.46■□□□□ 0.23
CHEK2-201ENST00000328354 NOSTRINQ8IVI9 506 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 DIS3L2Q8IYB7 885 aaKnown RBP16.46■□□□□ 0.23
CHEK2-201ENST00000328354 CLSTN2Q9H4D0 955 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 SERPINA10Q9UK55 444 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 PCDHA7Q9UN72 937 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 BRCA1P38398 1863 aaKnown RBP16.46■□□□□ 0.23
CHEK2-201ENST00000328354 SIPA1L1O43166 1804 aa16.46■□□□□ 0.23
CHEK2-201ENST00000328354 SPTLC2O15270 562 aa16.46■□□□□ 0.22
CHEK2-201ENST00000328354 NR1I2O75469 434 aa16.46■□□□□ 0.22
CHEK2-201ENST00000328354 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.22
CHEK2-201ENST00000328354 ME1P48163 572 aa16.46■□□□□ 0.22
CHEK2-201ENST00000328354 PICALMQ13492 652 aa16.46■□□□□ 0.22
CHEK2-201ENST00000328354 GNL2Q13823 731 aaKnown RBP16.46■□□□□ 0.22
CHEK2-201ENST00000328354 SLC39A14Q15043 492 aa16.46■□□□□ 0.22
CHEK2-201ENST00000328354 KIAA0825Q8IV33 1275 aa16.46■□□□□ 0.22
CHEK2-201ENST00000328354 SHISA4Q96DD7 197 aa16.46■□□□□ 0.22
CHEK2-201ENST00000328354 VPS33BQ9H267 617 aa16.46■□□□□ 0.22
CHEK2-201ENST00000328354 KCNJ14Q9UNX9 436 aa16.46■□□□□ 0.22
CHEK2-201ENST00000328354 V9GY48 417 aaPredicted RBP16.46■□□□□ 0.22
CHEK2-201ENST00000328354 YDJCA8MPS7 323 aa16.45■□□□□ 0.22
CHEK2-201ENST00000328354 BTBD18B2RXH4 712 aa16.45■□□□□ 0.22
CHEK2-201ENST00000328354 GNAQP50148 359 aa16.45■□□□□ 0.22
CHEK2-201ENST00000328354 CCAR1Q8IX12 1150 aaKnown RBP16.45■□□□□ 0.22
CHEK2-201ENST00000328354 TMEM47Q9BQJ4 181 aa16.45■□□□□ 0.22
CHEK2-201ENST00000328354 PHF20Q9BVI0 1012 aa16.45■□□□□ 0.22
CHEK2-201ENST00000328354 IDI2Q9BXS1 227 aa16.45■□□□□ 0.22
CHEK2-201ENST00000328354 PPP1R1BQ9UD71 204 aaPredicted RBP16.45■□□□□ 0.22
CHEK2-201ENST00000328354 SWAP70Q9UH65 585 aa16.45■□□□□ 0.22
CHEK2-201ENST00000328354 PTPAQ15257 358 aa16.44■□□□□ 0.22
CHEK2-201ENST00000328354 EHD4Q9H223 541 aa16.44■□□□□ 0.22
CHEK2-201ENST00000328354 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
CHEK2-201ENST00000328354 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
CHEK2-201ENST00000328354 PPP6R2O75170 966 aa16.44■□□□□ 0.22
CHEK2-201ENST00000328354 TGFB2P61812 414 aa16.44■□□□□ 0.22
CHEK2-201ENST00000328354 MAP3K11Q16584 847 aa16.44■□□□□ 0.22
CHEK2-201ENST00000328354 ENGASEQ8NFI3 743 aa16.44■□□□□ 0.22
CHEK2-201ENST00000328354 GOLPH3LQ9H4A5 285 aa16.44■□□□□ 0.22
CHEK2-201ENST00000328354 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
CHEK2-201ENST00000328354 FAM160A1Q05DH4 1040 aa16.43■□□□□ 0.22
CHEK2-201ENST00000328354 NFIAQ12857 509 aa16.43■□□□□ 0.22
CHEK2-201ENST00000328354 SNW1Q13573 536 aaKnown RBP16.43■□□□□ 0.22
CHEK2-201ENST00000328354 SF3A1Q15459 793 aaKnown RBP16.43■□□□□ 0.22
CHEK2-201ENST00000328354 PFKFB3Q16875 520 aaPredicted RBP16.43■□□□□ 0.22
CHEK2-201ENST00000328354 SOGA3Q5TF21 947 aa16.43■□□□□ 0.22
CHEK2-201ENST00000328354 MRPS27Q92552 414 aaKnown RBP16.43■□□□□ 0.22
CHEK2-201ENST00000328354 TNMDQ9H2S6 317 aa16.43■□□□□ 0.22
CHEK2-201ENST00000328354 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.43■□□□□ 0.22
CHEK2-201ENST00000328354 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
CHEK2-201ENST00000328354 STX8Q9UNK0 236 aa16.43■□□□□ 0.22
CHEK2-201ENST00000328354 IGKV6D-41A0A0C4DH26 115 aa16.42■□□□□ 0.22
CHEK2-201ENST00000328354 PALM3A6NDB9 673 aaPredicted RBP16.42■□□□□ 0.22
CHEK2-201ENST00000328354 HLA-DOAP06340 250 aa16.42■□□□□ 0.22
CHEK2-201ENST00000328354 TOP1P11387 765 aaKnown RBP16.42■□□□□ 0.22
CHEK2-201ENST00000328354 SCG2P13521 617 aa16.42■□□□□ 0.22
CHEK2-201ENST00000328354 RILPL1Q5EBL4 403 aa16.42■□□□□ 0.22
CHEK2-201ENST00000328354 AXDND1Q5T1B0 1012 aaPredicted RBP16.42■□□□□ 0.22
CHEK2-201ENST00000328354 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
CHEK2-201ENST00000328354 CEP95Q96GE4 821 aa16.42■□□□□ 0.22
CHEK2-201ENST00000328354 LZTS2Q9BRK4 669 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms