RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PNMA1Q8ND90 353 aa17.27■□□□□ 0.35
TPM3-205ENST00000328159 SUPT20HQ8NEM7 779 aa17.27■□□□□ 0.35
TPM3-205ENST00000328159 TNMDQ9H2S6 317 aa17.27■□□□□ 0.35
TPM3-205ENST00000328159 GOLPH3LQ9H4A5 285 aa17.27■□□□□ 0.35
TPM3-205ENST00000328159 CNTNAP5Q8WYK1 1306 aa17.27■□□□□ 0.35
TPM3-205ENST00000328159 BTBD18B2RXH4 712 aa17.26■□□□□ 0.35
TPM3-205ENST00000328159 WDHD1O75717 1129 aaPredicted RBP17.26■□□□□ 0.35
TPM3-205ENST00000328159 XBP1P17861 261 aa17.26■□□□□ 0.35
TPM3-205ENST00000328159 KIF5BP33176 963 aa17.26■□□□□ 0.35
TPM3-205ENST00000328159 AOC3Q16853 763 aa17.26■□□□□ 0.35
TPM3-205ENST00000328159 DACT2Q5SW24 774 aa17.26■□□□□ 0.35
TPM3-205ENST00000328159 ADALQ6DHV7 355 aa17.26■□□□□ 0.35
TPM3-205ENST00000328159 NOSTRINQ8IVI9 506 aa17.26■□□□□ 0.35
TPM3-205ENST00000328159 SRBD1Q8N5C6 995 aaKnown RBP17.26■□□□□ 0.35
TPM3-205ENST00000328159 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
TPM3-205ENST00000328159 MAP3K14Q99558 947 aa17.26■□□□□ 0.35
TPM3-205ENST00000328159 FOXP1Q9H334 677 aaPredicted RBP17.26■□□□□ 0.35
TPM3-205ENST00000328159 A0A1W2PQ27 194 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 A0A1W2PQ64 194 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 A0A1W2PQD8 194 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 CRKP46108 304 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 KIAA2012Q0VF49 1180 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 CDC42EP5Q6NZY7 148 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 FSIP1Q8NA03 581 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 NEDD1Q8NHV4 660 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 MRIQ9BWK5 157 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 DDX4Q9NQI0 724 aaKnown RBP17.25■□□□□ 0.35
TPM3-205ENST00000328159 MYH8P13535 1937 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 C21orf2O43822 256 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 FAM160A1Q05DH4 1040 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 CCDC173Q0VFZ6 552 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 GRM4Q14833 912 aa17.25■□□□□ 0.35
TPM3-205ENST00000328159 APOBEC3HQ6NTF7 200 aaKnown RBP17.25■□□□□ 0.35
TPM3-205ENST00000328159 RBM43Q6ZSC3 357 aaKnown RBP17.25■□□□□ 0.35
TPM3-205ENST00000328159 MRPS27Q92552 414 aaKnown RBP17.25■□□□□ 0.35
TPM3-205ENST00000328159 hCG_1642624A0A1W2PR95 340 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 CCDC192P0DO97 292 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 GRIPAP1Q4V328 841 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 KIAA0825Q8IV33 1275 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 TTLL6Q8N841 843 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 ENGASEQ8NFI3 743 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 SHISA4Q96DD7 197 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 ZDHHC15Q96MV8 337 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 PPP1R9BQ96SB3 815 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 TMEM47Q9BQJ4 181 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 VPS54Q9P1Q0 977 aa17.24■□□□□ 0.35
TPM3-205ENST00000328159 HDLBPQ00341 1268 aaKnown RBP17.23■□□□□ 0.35
TPM3-205ENST00000328159 SNW1Q13573 536 aaKnown RBP17.23■□□□□ 0.35
TPM3-205ENST00000328159 PTPAQ15257 358 aa17.23■□□□□ 0.35
TPM3-205ENST00000328159 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
TPM3-205ENST00000328159 BAZ2BQ9UIF8 2168 aaKnown RBP17.23■□□□□ 0.35
TPM3-205ENST00000328159 KIF13BQ9NQT8 1826 aa17.23■□□□□ 0.35
TPM3-205ENST00000328159 PPIP5K2O43314 1243 aa17.23■□□□□ 0.35
TPM3-205ENST00000328159 PPP6R2O75170 966 aa17.23■□□□□ 0.35
TPM3-205ENST00000328159 GABPAQ06546 454 aa17.23■□□□□ 0.35
TPM3-205ENST00000328159 CKAP2LQ8IYA6 745 aa17.23■□□□□ 0.35
TPM3-205ENST00000328159 JMYQ8N9B5 988 aa17.23■□□□□ 0.35
TPM3-205ENST00000328159 OXER1Q8TDS5 423 aa17.23■□□□□ 0.35
TPM3-205ENST00000328159 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
TPM3-205ENST00000328159 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
TPM3-205ENST00000328159 GNAQP50148 359 aa17.22■□□□□ 0.35
TPM3-205ENST00000328159 NR5A1Q13285 461 aa17.22■□□□□ 0.35
TPM3-205ENST00000328159 UVSSAQ2YD98 709 aa17.22■□□□□ 0.35
TPM3-205ENST00000328159 CCDC93Q567U6 631 aa17.22■□□□□ 0.35
TPM3-205ENST00000328159 AXDND1Q5T1B0 1012 aaPredicted RBP17.22■□□□□ 0.35
TPM3-205ENST00000328159 PSME4Q14997 1843 aa17.21■□□□□ 0.35
TPM3-205ENST00000328159 PLIN4Q96Q06 1357 aa17.21■□□□□ 0.35
TPM3-205ENST00000328159 CTAGE5O15320 804 aa17.21■□□□□ 0.35
TPM3-205ENST00000328159 KINO60870 393 aaKnown RBP17.21■□□□□ 0.35
TPM3-205ENST00000328159 SCG2P13521 617 aa17.21■□□□□ 0.35
TPM3-205ENST00000328159 DPEP1P16444 411 aa17.21■□□□□ 0.35
TPM3-205ENST00000328159 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
TPM3-205ENST00000328159 KRT2P35908 639 aa17.21■□□□□ 0.35
TPM3-205ENST00000328159 TOB1P50616 345 aaPredicted RBP17.21■□□□□ 0.35
TPM3-205ENST00000328159 PFKFB3Q16875 520 aaPredicted RBP17.21■□□□□ 0.35
TPM3-205ENST00000328159 RILPL1Q5EBL4 403 aa17.21■□□□□ 0.35
TPM3-205ENST00000328159 RTKN2Q8IZC4 609 aa17.21■□□□□ 0.35
TPM3-205ENST00000328159 FMR1NBQ8N0W7 255 aaPredicted RBP17.21■□□□□ 0.35
TPM3-205ENST00000328159 MAD2L2Q9UI95 211 aa17.21■□□□□ 0.35
TPM3-205ENST00000328159 A0A1B0GVL5 298 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 TYRO3Q06418 890 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 STAG2Q8N3U4 1231 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 SWAP70Q9UH65 585 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 TOP1P11387 765 aaKnown RBP17.2■□□□□ 0.34
TPM3-205ENST00000328159 KCNA3P22001 575 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 CMA1P23946 247 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 NOVP48745 357 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 NDUFA8P51970 172 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 RBM5P52756 815 aaKnown RBP eCLIP17.2■□□□□ 0.34
TPM3-205ENST00000328159 NFIAQ12857 509 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 CEP95Q96GE4 821 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 BRMS1Q9HCU9 246 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.2■□□□□ 0.34
TPM3-205ENST00000328159 SERPINB13Q9UIV8 391 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 SERPINA10Q9UK55 444 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 PCDHAC2Q9Y5I4 1007 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 MRVI1Q9Y6F6 885 aa17.2■□□□□ 0.34
TPM3-205ENST00000328159 MYO3BQ8WXR4 1341 aa17.19■□□□□ 0.34
TPM3-205ENST00000328159 PALM3A6NDB9 673 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms