RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 MTA3Q9BTC8 594 aa21.94■■□□□ 1.1
EXOSC3-201ENST00000327304 JAG1P78504 1218 aa21.94■■□□□ 1.1
EXOSC3-201ENST00000327304 SKOR2Q2VWA4 1001 aaPredicted RBP21.94■■□□□ 1.1
EXOSC3-201ENST00000327304 GTF3C6Q969F1 213 aa21.94■■□□□ 1.1
EXOSC3-201ENST00000327304 GLIS2Q9BZE0 524 aaPredicted RBP21.94■■□□□ 1.1
EXOSC3-201ENST00000327304 BRPF3Q9ULD4 1205 aa21.94■■□□□ 1.1
EXOSC3-201ENST00000327304 GREB1LQ9C091 1923 aaPredicted RBP21.93■■□□□ 1.1
EXOSC3-201ENST00000327304 MPHOSPH10O00566 681 aaKnown RBP21.93■■□□□ 1.1
EXOSC3-201ENST00000327304 TRAK2O60296 914 aa21.93■■□□□ 1.1
EXOSC3-201ENST00000327304 EVCP57679 992 aa21.93■■□□□ 1.1
EXOSC3-201ENST00000327304 WTAPQ15007 396 aa21.93■■□□□ 1.1
EXOSC3-201ENST00000327304 CHMP4CQ96CF2 233 aa21.93■■□□□ 1.1
EXOSC3-201ENST00000327304 CCDC17Q96LX7 622 aa21.93■■□□□ 1.1
EXOSC3-201ENST00000327304 TCP11L1Q9NUJ3 509 aa21.93■■□□□ 1.1
EXOSC3-201ENST00000327304 ERICH2A1L162 156 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 STX6O43752 255 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 SYT1P21579 422 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 LIFRP42702 1097 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 RCSD1Q6JBY9 416 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 CLEC10AQ8IUN9 316 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 ZNF274Q96GC6 653 aaPredicted RBP21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 IGKV6D-41A0A0C4DH26 115 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 PFKFB2O60825 505 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 GSE1Q14687 1217 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 MAP1SQ66K74 1059 aaPredicted RBP21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 CEP95Q96GE4 821 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 FZD1Q9UP38 647 aa21.92■■□□□ 1.1
EXOSC3-201ENST00000327304 KLF18A0A0U1RQI7 1052 aa21.91■■□□□ 1.1
EXOSC3-201ENST00000327304 PHF20L1A8MW92 1017 aa21.91■■□□□ 1.1
EXOSC3-201ENST00000327304 ABCB5Q2M3G0 1257 aa21.91■■□□□ 1.1
EXOSC3-201ENST00000327304 SUPT20HL1Q3ZLR7 823 aa21.91■■□□□ 1.1
EXOSC3-201ENST00000327304 DCAF15Q66K64 600 aa21.91■■□□□ 1.1
EXOSC3-201ENST00000327304 NFXL1Q6ZNB6 911 aa21.91■■□□□ 1.1
EXOSC3-201ENST00000327304 SGMS1Q86VZ5 419 aa21.91■■□□□ 1.1
EXOSC3-201ENST00000327304 HOOK2Q96ED9 719 aa21.91■■□□□ 1.1
EXOSC3-201ENST00000327304 CDCA5Q96FF9 252 aa21.91■■□□□ 1.1
EXOSC3-201ENST00000327304 LLPHQ9BRT6 129 aaKnown RBP21.91■■□□□ 1.1
EXOSC3-201ENST00000327304 GH2P01242 217 aa21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 ZSCAN22P10073 491 aaPredicted RBP21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 PDCP20941 246 aa21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 GUCY1A2P33402 732 aa21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 IFIT1BQ5T764 474 aaKnown RBP21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 CDC37L1Q7L3B6 337 aa21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 RAB11FIP4Q86YS3 637 aa21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 NAP1L2Q9ULW6 460 aaPredicted RBP21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 MCTP1Q6DN14 999 aa21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 LDHDQ86WU2 507 aa21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 ZNF341Q9BYN7 854 aa21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 MTMR4Q9NYA4 1195 aa21.9■■□□□ 1.1
EXOSC3-201ENST00000327304 CCDC69A6NI79 296 aa21.89■■□□□ 1.09
EXOSC3-201ENST00000327304 STK3Q13188 491 aa21.89■■□□□ 1.09
EXOSC3-201ENST00000327304 SEPT2Q15019 361 aa21.89■■□□□ 1.09
EXOSC3-201ENST00000327304 CCDC178Q5BJE1 867 aa21.89■■□□□ 1.09
EXOSC3-201ENST00000327304 TMEM179Q6ZVK1 233 aa21.89■■□□□ 1.09
EXOSC3-201ENST00000327304 DGKHQ86XP1 1220 aa21.89■■□□□ 1.09
EXOSC3-201ENST00000327304 ANKS1AQ92625 1134 aa21.89■■□□□ 1.09
EXOSC3-201ENST00000327304 STX8Q9UNK0 236 aa21.89■■□□□ 1.09
EXOSC3-201ENST00000327304 GOLGA8BA8MQT2 603 aa21.88■■□□□ 1.09
EXOSC3-201ENST00000327304 PDIA3P30101 505 aaKnown RBP21.88■■□□□ 1.09
EXOSC3-201ENST00000327304 CAP2P40123 477 aa21.88■■□□□ 1.09
EXOSC3-201ENST00000327304 APOA5Q6Q788 366 aa21.88■■□□□ 1.09
EXOSC3-201ENST00000327304 TMTC2Q8N394 836 aa21.88■■□□□ 1.09
EXOSC3-201ENST00000327304 MYL10Q9BUA6 226 aa21.88■■□□□ 1.09
EXOSC3-201ENST00000327304 ZBTB21Q9ULJ3 1066 aa21.88■■□□□ 1.09
EXOSC3-201ENST00000327304 NOVP48745 357 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 SCRN1Q12765 414 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 PRKG1Q13976 671 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 CABP5Q9NP86 173 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 HPS5Q9UPZ3 1129 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 TRAF5O00463 557 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 INPP5BP32019 993 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 ZNF654Q8IZM8 581 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 TMEM47Q9BQJ4 181 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 ZNF112Q9UJU3 913 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 ATP6V1DQ9Y5K8 247 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 SLC12A7Q9Y666 1083 aa21.87■■□□□ 1.09
EXOSC3-201ENST00000327304 ATAD5Q96QE3 1844 aa21.86■■□□□ 1.09
EXOSC3-201ENST00000327304 RXRAP19793 462 aa21.86■■□□□ 1.09
EXOSC3-201ENST00000327304 FOXD4L5Q5VV16 416 aaPredicted RBP21.86■■□□□ 1.09
EXOSC3-201ENST00000327304 LARP1BQ659C4 914 aaKnown RBP21.86■■□□□ 1.09
EXOSC3-201ENST00000327304 SMARCC2Q8TAQ2 1214 aa21.86■■□□□ 1.09
EXOSC3-201ENST00000327304 FOXD4L4Q8WXT5 416 aaPredicted RBP21.86■■□□□ 1.09
EXOSC3-201ENST00000327304 WRNIP1Q96S55 665 aa21.86■■□□□ 1.09
EXOSC3-201ENST00000327304 MTMR6Q9Y217 621 aa21.86■■□□□ 1.09
EXOSC3-201ENST00000327304 F13A1P00488 732 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 FMR1Q06787 632 aaKnown RBP eCLIP21.85■■□□□ 1.094e-6■■■■□ 21.6
EXOSC3-201ENST00000327304 MICU3Q86XE3 530 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 KLRG1Q96E93 195 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 KAT14Q9H8E8 782 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 KANSL2Q9H9L4 492 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 LMBRD1Q9NUN5 540 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 ZBTB43O43298 467 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 CTNND1O60716 968 aaKnown RBP21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 USP2O75604 605 aaPredicted RBP21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 TTLL1O95922 423 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 CCT2P78371 535 aaKnown RBP21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 ATP2B2Q01814 1243 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 ICA1Q05084 483 aa21.85■■□□□ 1.09
EXOSC3-201ENST00000327304 SIAH1Q8IUQ4 282 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms