RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 NR2E3Q9Y5X4 410 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 RPTORQ8N122 1335 aa21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 ERVK-9P63128 1117 aa21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 ERVK-24P63145 666 aa21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 RAB3GAP1Q15042 981 aa21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 CCAR1Q8IX12 1150 aaKnown RBP21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 DNAJC2Q99543 621 aaKnown RBP21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 HMX1Q9NP08 348 aaPredicted RBP21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 PAG1Q9NWQ8 432 aa21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 RABGAP1Q9Y3P9 1069 aa21.41■■□□□ 1.02
PTPMT1-201ENST00000326656 ANKLE1Q8NAG6 615 aa21.4■■□□□ 1.02
PTPMT1-201ENST00000326656 HAUS7Q99871 368 aa21.4■■□□□ 1.02
PTPMT1-201ENST00000326656 DCP1AQ9NPI6 582 aaPredicted RBP21.4■■□□□ 1.02
PTPMT1-201ENST00000326656 ATP8A2Q9NTI2 1148 aa21.4■■□□□ 1.02
PTPMT1-201ENST00000326656 COLQQ9Y215 455 aaPredicted RBP21.4■■□□□ 1.02
PTPMT1-201ENST00000326656 DDX60LQ5H9U9 1706 aaKnown RBP21.4■■□□□ 1.02
PTPMT1-201ENST00000326656 PLXNB2O15031 1838 aa21.39■■□□□ 1.02
PTPMT1-201ENST00000326656 ADD2P35612 726 aa21.39■■□□□ 1.01
PTPMT1-201ENST00000326656 CCNA1P78396 465 aa21.39■■□□□ 1.01
PTPMT1-201ENST00000326656 LBX2Q6XYB7 198 aa21.39■■□□□ 1.01
PTPMT1-201ENST00000326656 CATSPERGQ6ZRH7 1159 aa21.39■■□□□ 1.01
PTPMT1-201ENST00000326656 LRRCC1Q9C099 1032 aa21.39■■□□□ 1.01
PTPMT1-201ENST00000326656 SWAP70Q9UH65 585 aa21.39■■□□□ 1.01
PTPMT1-201ENST00000326656 GLRX3O76003 335 aaKnown RBP21.38■■□□□ 1.01
PTPMT1-201ENST00000326656 FXR1P51114 621 aaKnown RBP eCLIP21.38■■□□□ 1.01
PTPMT1-201ENST00000326656 UBE3CQ15386 1083 aa21.38■■□□□ 1.01
PTPMT1-201ENST00000326656 Q3C1V9 767 aa21.38■■□□□ 1.01
PTPMT1-201ENST00000326656 USP6NLQ92738 828 aa21.38■■□□□ 1.01
PTPMT1-201ENST00000326656 BOLA2Q9H3K6 86 aa21.38■■□□□ 1.01
PTPMT1-201ENST00000326656 NAV1Q8NEY1 1877 aa21.38■■□□□ 1.01
PTPMT1-201ENST00000326656 VCAM1P19320 739 aa21.37■■□□□ 1.01
PTPMT1-201ENST00000326656 GUCY1A2P33402 732 aa21.37■■□□□ 1.01
PTPMT1-201ENST00000326656 RGS2P41220 211 aa21.37■■□□□ 1.01
PTPMT1-201ENST00000326656 MAP3K21Q5TCX8 1036 aa21.37■■□□□ 1.01
PTPMT1-201ENST00000326656 ZSCAN25Q6NSZ9 544 aa21.37■■□□□ 1.01
PTPMT1-201ENST00000326656 NECAB2Q7Z6G3 386 aa21.37■■□□□ 1.01
PTPMT1-201ENST00000326656 PLEKHH3Q7Z736 793 aa21.37■■□□□ 1.01
PTPMT1-201ENST00000326656 LCORLQ8N3X6 602 aa21.37■■□□□ 1.01
PTPMT1-201ENST00000326656 ACER1Q8TDN7 264 aa21.37■■□□□ 1.01
PTPMT1-201ENST00000326656 CYP2B6P20813 491 aa21.36■■□□□ 1.01
PTPMT1-201ENST00000326656 MORN1Q5T089 497 aa21.36■■□□□ 1.01
PTPMT1-201ENST00000326656 POTEEQ6S8J3 1075 aa21.36■■□□□ 1.01
PTPMT1-201ENST00000326656 TMEM179Q6ZVK1 233 aa21.36■■□□□ 1.01
PTPMT1-201ENST00000326656 GPR142Q7Z601 462 aa21.36■■□□□ 1.01
PTPMT1-201ENST00000326656 TRIB2Q92519 343 aa21.36■■□□□ 1.01
PTPMT1-201ENST00000326656 PAGR1Q9BTK6 254 aa21.36■■□□□ 1.01
PTPMT1-201ENST00000326656 SEPT2Q15019 361 aa21.35■■□□□ 1.01
PTPMT1-201ENST00000326656 ZYXQ15942 572 aaKnown RBP21.35■■□□□ 1.01
PTPMT1-201ENST00000326656 SDR42E1Q8WUS8 393 aa21.35■■□□□ 1.01
PTPMT1-201ENST00000326656 EDC3Q96F86 508 aaKnown RBP21.35■■□□□ 1.01
PTPMT1-201ENST00000326656 DDRGK1Q96HY6 314 aa21.35■■□□□ 1.01
PTPMT1-201ENST00000326656 PORCNQ9H237 461 aa21.35■■□□□ 1.01
PTPMT1-201ENST00000326656 ARMT1Q9H993 441 aa21.35■■□□□ 1.01
PTPMT1-201ENST00000326656 HOXC10Q9NYD6 342 aa21.35■■□□□ 1.01
PTPMT1-201ENST00000326656 TRIOBPQ9H2D6 2365 aa21.34■■□□□ 1.01
PTPMT1-201ENST00000326656 AMOTL1Q8IY63 956 aa21.34■■□□□ 1.01
PTPMT1-201ENST00000326656 PAWRQ96IZ0 340 aaKnown RBP21.34■■□□□ 1.01
PTPMT1-201ENST00000326656 CCDC17Q96LX7 622 aa21.34■■□□□ 1.01
PTPMT1-201ENST00000326656 MPHOSPH10O00566 681 aaKnown RBP21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 EVI5O60447 810 aa21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 PEX10O60683 326 aa21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 MBD4O95243 580 aa21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 ZKSCAN1P17029 563 aaPredicted RBP21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 MAP2K5Q13163 448 aa21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 COG2Q14746 738 aa21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 C20orf194Q5TEA3 1177 aa21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 APBA2Q99767 749 aa21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 NBPF3Q9H094 633 aa21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 BCL11AQ9H165 835 aa21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 RPAP3Q9H6T3 665 aaPredicted RBP21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 CWC22Q9HCG8 908 aaKnown RBP21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 OGDHLQ9ULD0 1010 aa21.33■■□□□ 1.01
PTPMT1-201ENST00000326656 MYH7P12883 1935 aa21.32■■□□□ 1
PTPMT1-201ENST00000326656 SLC15A5A6NIM6 579 aa21.32■■□□□ 1
PTPMT1-201ENST00000326656 CNMDO75829 334 aa21.32■■□□□ 1
PTPMT1-201ENST00000326656 PRKAR2AP13861 404 aaKnown RBP21.32■■□□□ 1
PTPMT1-201ENST00000326656 TRIM32Q13049 653 aa21.32■■□□□ 1
PTPMT1-201ENST00000326656 C12orf60Q5U649 245 aa21.32■■□□□ 1
PTPMT1-201ENST00000326656 LPAR1Q92633 364 aa21.32■■□□□ 1
PTPMT1-201ENST00000326656 DCTPP1Q9H773 170 aa21.32■■□□□ 1
PTPMT1-201ENST00000326656 SH2D4AQ9H788 454 aa21.32■■□□□ 1
PTPMT1-201ENST00000326656 ECHDC1Q9NTX5 307 aa21.32■■□□□ 1
PTPMT1-201ENST00000326656 A0A1W2PRG0 241 aa21.31■■□□□ 1
PTPMT1-201ENST00000326656 CHRDL2Q6WN34 429 aa21.31■■□□□ 1
PTPMT1-201ENST00000326656 ARHGEF10LQ9HCE6 1279 aa21.31■■□□□ 1
PTPMT1-201ENST00000326656 MYH8P13535 1937 aa21.3■■□□□ 1
PTPMT1-201ENST00000326656 SPDYE16A6NNV3 312 aaPredicted RBP21.3■■□□□ 1
PTPMT1-201ENST00000326656 PRKAB2O43741 272 aa21.3■■□□□ 1
PTPMT1-201ENST00000326656 HOXC6P09630 235 aa21.3■■□□□ 1
PTPMT1-201ENST00000326656 CYP2D6P10635 497 aa21.3■■□□□ 1
PTPMT1-201ENST00000326656 PTPREP23469 700 aa21.3■■□□□ 1
PTPMT1-201ENST00000326656 CACNB2Q08289 660 aaPredicted RBP21.3■■□□□ 1
PTPMT1-201ENST00000326656 MB21D1Q8N884 522 aa21.3■■□□□ 1
PTPMT1-201ENST00000326656 GPATCH3Q96I76 525 aa21.3■■□□□ 1
PTPMT1-201ENST00000326656 PRO3102Q9H379 93 aa21.3■■□□□ 1
PTPMT1-201ENST00000326656 TMX2Q9Y320 296 aa21.3■■□□□ 1
PTPMT1-201ENST00000326656 IVNS1ABPQ9Y6Y0 642 aa21.3■■□□□ 1
PTPMT1-201ENST00000326656 USP17L12C9JPN9 530 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms