RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 ESR2Q92731 530 aa18.42■□□□□ 0.54
USHBP1-202ENST00000324554 PCDHB6Q9Y5E3 794 aa18.42■□□□□ 0.54
USHBP1-202ENST00000324554 CACNA1SQ13698 1873 aa18.42■□□□□ 0.54
USHBP1-202ENST00000324554 A0A1B0GUL6 1792 aa18.42■□□□□ 0.54
USHBP1-202ENST00000324554 IGSF3O75054 1194 aa18.41■□□□□ 0.54
USHBP1-202ENST00000324554 BMP6P22004 513 aa18.41■□□□□ 0.54
USHBP1-202ENST00000324554 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
USHBP1-202ENST00000324554 OXER1Q8TDS5 423 aa18.41■□□□□ 0.54
USHBP1-202ENST00000324554 GNL3LQ9NVN8 582 aaKnown RBP18.41■□□□□ 0.54
USHBP1-202ENST00000324554 SERPINC1P01008 464 aa18.41■□□□□ 0.54
USHBP1-202ENST00000324554 DHX8Q14562 1220 aaKnown RBP18.41■□□□□ 0.54
USHBP1-202ENST00000324554 OLFM4Q6UX06 510 aa18.41■□□□□ 0.54
USHBP1-202ENST00000324554 MORC2Q9Y6X9 1032 aaPredicted RBP18.41■□□□□ 0.54
USHBP1-202ENST00000324554 TMEM232C9JQI7 657 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 PDE4BQ07343 736 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 GOLGA8FQ08AF8 430 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 GOLGA8DPQ0D2H9 430 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 UBE4AQ14139 1066 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 CCDC93Q567U6 631 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 FANCLQ9NW38 375 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 JAG2Q9Y219 1238 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 SERPINB2P05120 415 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 CFAP100Q494V2 611 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 SHISA4Q96DD7 197 aa18.4■□□□□ 0.54
USHBP1-202ENST00000324554 RNF26Q9BY78 433 aaPredicted RBP18.4■□□□□ 0.54
USHBP1-202ENST00000324554 TXNRD3Q86VQ6 643 aa18.39■□□□□ 0.53
USHBP1-202ENST00000324554 ENAHQ8N8S7 591 aaPredicted RBP18.39■□□□□ 0.53
USHBP1-202ENST00000324554 DUOX1Q9NRD9 1551 aa18.39■□□□□ 0.53
USHBP1-202ENST00000324554 UBR3Q6ZT12 1888 aa18.39■□□□□ 0.53
USHBP1-202ENST00000324554 RGL2O15211 777 aa18.39■□□□□ 0.53
USHBP1-202ENST00000324554 POLR2DO15514 142 aaKnown RBP18.39■□□□□ 0.53
USHBP1-202ENST00000324554 CBFA2T2O43439 604 aa18.39■□□□□ 0.53
USHBP1-202ENST00000324554 ADRA2BP18089 450 aa18.39■□□□□ 0.53
USHBP1-202ENST00000324554 DYNLL1P63167 89 aaKnown RBP18.39■□□□□ 0.53
USHBP1-202ENST00000324554 POSTNQ15063 836 aa18.39■□□□□ 0.53
USHBP1-202ENST00000324554 PPP2R5BQ15173 497 aa18.39■□□□□ 0.53
USHBP1-202ENST00000324554 ZNF579Q8NAF0 562 aaKnown RBP18.39■□□□□ 0.53
USHBP1-202ENST00000324554 ZSCAN10Q96SZ4 725 aaPredicted RBP18.39■□□□□ 0.53
USHBP1-202ENST00000324554 TMX1Q9H3N1 280 aa18.39■□□□□ 0.53
USHBP1-202ENST00000324554 INTS13Q9NVM9 706 aa18.39■□□□□ 0.53
USHBP1-202ENST00000324554 RGS17Q9UGC6 210 aaPredicted RBP18.39■□□□□ 0.53
USHBP1-202ENST00000324554 HOOK1Q9UJC3 728 aaKnown RBP18.39■□□□□ 0.53
USHBP1-202ENST00000324554 SRPRBQ9Y5M8 271 aaKnown RBP18.39■□□□□ 0.53
USHBP1-202ENST00000324554 TNRC6CQ9HCJ0 1690 aaKnown RBP18.39■□□□□ 0.53
USHBP1-202ENST00000324554 DDR1Q08345 913 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 NT5DC1Q5TFE4 455 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 VSTM4Q8IW00 320 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 ZNF384Q8TF68 577 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 FAM84BQ96KN1 310 aaPredicted RBP18.38■□□□□ 0.53
USHBP1-202ENST00000324554 GPR101Q96P66 508 aaPredicted RBP18.38■□□□□ 0.53
USHBP1-202ENST00000324554 CABP5Q9NP86 173 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 MYH6P13533 1939 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 CYP2D7A0A087X1C5 515 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 FANCGO15287 622 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 MYO1BO43795 1136 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 NRDCO43847 1150 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 PRR29P0C7W0 189 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 PKN1Q16512 942 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 ERCC6LQ2NKX8 1250 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 HSP90AA4PQ58FG1 418 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 CAVIN4Q5BKX8 364 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 SERTAD1Q9UHV2 236 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 MAN1B1Q9UKM7 699 aa18.38■□□□□ 0.53
USHBP1-202ENST00000324554 COL24A1Q17RW2 1714 aa18.37■□□□□ 0.53
USHBP1-202ENST00000324554 FUT2Q10981 343 aa18.37■□□□□ 0.53
USHBP1-202ENST00000324554 POTEAQ6S8J7 498 aa18.37■□□□□ 0.53
USHBP1-202ENST00000324554 HOMER1Q86YM7 354 aa18.37■□□□□ 0.53
USHBP1-202ENST00000324554 BRIP1Q9BX63 1249 aa18.37■□□□□ 0.53
USHBP1-202ENST00000324554 CEP131Q9UPN4 1083 aa18.37■□□□□ 0.53
USHBP1-202ENST00000324554 BAZ2AQ9UIF9 1905 aaKnown RBP18.37■□□□□ 0.53
USHBP1-202ENST00000324554 MYH2Q9UKX2 1941 aa18.37■□□□□ 0.53
USHBP1-202ENST00000324554 ATP2B1P20020 1258 aa18.37■□□□□ 0.53
USHBP1-202ENST00000324554 ETF1P62495 437 aaKnown RBP18.37■□□□□ 0.53
USHBP1-202ENST00000324554 VPS54Q9P1Q0 977 aa18.37■□□□□ 0.53
USHBP1-202ENST00000324554 ANKIB1Q9P2G1 1089 aa18.37■□□□□ 0.53
USHBP1-202ENST00000324554 SARSP49591 514 aaKnown RBP18.36■□□□□ 0.53
USHBP1-202ENST00000324554 AKAP17AQ02040 695 aaKnown RBP18.36■□□□□ 0.53
USHBP1-202ENST00000324554 IFIT1BQ5T764 474 aaKnown RBP18.36■□□□□ 0.53
USHBP1-202ENST00000324554 TRIM65Q6PJ69 517 aa18.36■□□□□ 0.53
USHBP1-202ENST00000324554 CSRNP2Q9H175 543 aa18.36■□□□□ 0.53
USHBP1-202ENST00000324554 ZNF446Q9NWS9 450 aa18.36■□□□□ 0.53
USHBP1-202ENST00000324554 FAM205CA6NFA0 338 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 PRDM1O75626 825 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 FGRP09769 529 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 USP49Q70CQ1 688 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 COL23A1Q86Y22 540 aaPredicted RBP18.35■□□□□ 0.53
USHBP1-202ENST00000324554 TMEM139Q8IV31 216 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 PHF20Q9BVI0 1012 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 DNAI1Q9UI46 699 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.35■□□□□ 0.53
USHBP1-202ENST00000324554 ACTN4O43707 911 aaKnown RBP18.35■□□□□ 0.53
USHBP1-202ENST00000324554 TOP1P11387 765 aaKnown RBP18.35■□□□□ 0.53
USHBP1-202ENST00000324554 XBP1P17861 261 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 MSL1Q68DK7 614 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 CATIPQ7Z7H3 387 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 REXO1L1PQ8IX06 675 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 PDILTQ8N807 584 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 FAM53CQ9NYF3 392 aa18.35■□□□□ 0.53
USHBP1-202ENST00000324554 hCG_1642624A0A1W2PR95 340 aa18.34■□□□□ 0.53
USHBP1-202ENST00000324554 PRPF3O43395 683 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms