RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 MYH2Q9UKX2 1941 aa18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 MYH13Q9UKX3 1938 aa18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 TRIM75PA6NK02 468 aa18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 ACTN4O43707 911 aaKnown RBP18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 SMC2O95347 1197 aa18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 NPY5RQ15761 445 aa18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 ARMCX5Q6P1M9 558 aa18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 C15orf52Q6ZUT6 534 aaKnown RBP18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 CCAR2Q8N163 923 aaKnown RBP18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 MLKLQ8NB16 471 aa18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 ANKS1AQ92625 1134 aa18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 C16orf45Q96MC5 204 aaPredicted RBP18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 MKRN1Q9UHC7 482 aaKnown RBP18.11■□□□□ 0.49
SMARCD2-202ENST00000323347 GNPATO15228 680 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 PLEKHA8P1O95397 391 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 MORC3Q14149 939 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 MAN1B1Q9UKM7 699 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 LEMD3Q9Y2U8 911 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 V9GY48 417 aaPredicted RBP18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 CNTNAP5Q8WYK1 1306 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 MYH6P13533 1939 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 LY75O60449 1722 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 LMOD1P29536 600 aaPredicted RBP18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 TMC6Q7Z403 805 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 FERMT2Q96AC1 680 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 TFCP2L1Q9NZI6 479 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 VPS54Q9P1Q0 977 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 SERTAD1Q9UHV2 236 aa18.1■□□□□ 0.49
SMARCD2-202ENST00000323347 PSDA5PKW4 1024 aaPredicted RBP18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 KIF2AO00139 706 aaPredicted RBP18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 POLR2DO15514 142 aaKnown RBP18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 PRDX5P30044 214 aa18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 ISM2Q6H9L7 571 aa18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 SMIM5Q71RC9 77 aa18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 SH3RF1Q7Z6J0 888 aa18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 ANKRD7Q92527 254 aa18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 CSRNP2Q9H175 543 aa18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 DACH1Q9UI36 760 aa18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 CCNL1Q9UK58 526 aaPredicted RBP18.09■□□□□ 0.49
SMARCD2-202ENST00000323347 CCDC88AQ3V6T2 1871 aa18.08■□□□□ 0.49
SMARCD2-202ENST00000323347 FOXN1O15353 648 aa18.08■□□□□ 0.49
SMARCD2-202ENST00000323347 PRDM1O75626 825 aa18.08■□□□□ 0.49
SMARCD2-202ENST00000323347 ATP1A3P13637 1013 aa18.08■□□□□ 0.49
SMARCD2-202ENST00000323347 PDE4BQ07343 736 aa18.08■□□□□ 0.49
SMARCD2-202ENST00000323347 SPECC1Q5M775 1068 aa18.08■□□□□ 0.49
SMARCD2-202ENST00000323347 CEP135Q66GS9 1140 aa18.08■□□□□ 0.49
SMARCD2-202ENST00000323347 SRBD1Q8N5C6 995 aaKnown RBP18.08■□□□□ 0.49
SMARCD2-202ENST00000323347 ENOX1Q8TC92 643 aaKnown RBP18.08■□□□□ 0.49
SMARCD2-202ENST00000323347 BRMS1Q9HCU9 246 aa18.08■□□□□ 0.49
SMARCD2-202ENST00000323347 TAF1LQ8IZX4 1826 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 USP27XA6NNY8 438 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 TUBB4AP04350 444 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 TRAPPC10P48553 1259 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 UBASH3AP57075 661 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 PPP4CP60510 307 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 PTPN14Q15678 1187 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 EARS2Q5JPH6 523 aaKnown RBP18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 RCSD1Q6JBY9 416 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 TXNRD3Q86VQ6 643 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 CTCFLQ8NI51 663 aaPredicted RBP18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 WDR66Q8TBY9 1149 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 TMX1Q9H3N1 280 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 ROBO3Q96MS0 1386 aa18.08■□□□□ 0.48
SMARCD2-202ENST00000323347 TNRC6CQ9HCJ0 1690 aaKnown RBP18.07■□□□□ 0.48
SMARCD2-202ENST00000323347 ZNF18P17022 549 aa18.07■□□□□ 0.48
SMARCD2-202ENST00000323347 SFPQP23246 707 aaKnown RBP eCLIP18.07■□□□□ 0.48
SMARCD2-202ENST00000323347 DGKHQ86XP1 1220 aa18.07■□□□□ 0.48
SMARCD2-202ENST00000323347 CCDC125Q86Z20 511 aa18.07■□□□□ 0.48
SMARCD2-202ENST00000323347 VSTM4Q8IW00 320 aa18.07■□□□□ 0.48
SMARCD2-202ENST00000323347 SMARCE1Q969G3 411 aa18.07■□□□□ 0.48
SMARCD2-202ENST00000323347 ERCC5P28715 1186 aaPredicted RBP18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 GRAPQ13588 217 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 C12orf60Q5U649 245 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 E4F1Q66K89 784 aaPredicted RBP18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 AMIGO3Q86WK7 504 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 GRAPLQ8TC17 118 aaPredicted RBP18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 CCDC34Q96HJ3 373 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 BCL11BQ9C0K0 894 aaPredicted RBP18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 FANCLQ9NW38 375 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 TAOK2Q9UL54 1235 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 FAM205CA6NFA0 338 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 PRR29P0C7W0 189 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 PFKFB3Q16875 520 aaPredicted RBP18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 CCDC178Q5BJE1 867 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 CCDC112Q8NEF3 446 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 TSC1Q92574 1164 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 DPF2Q92785 391 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 TCP11L1Q9NUJ3 509 aa18.06■□□□□ 0.48
SMARCD2-202ENST00000323347 NRDCO43847 1150 aa18.05■□□□□ 0.48
SMARCD2-202ENST00000323347 SLFN14P0C7P3 912 aa18.05■□□□□ 0.48
SMARCD2-202ENST00000323347 CYP2D6P10635 497 aa18.05■□□□□ 0.48
SMARCD2-202ENST00000323347 SCG2P13521 617 aa18.05■□□□□ 0.48
SMARCD2-202ENST00000323347 ATP2C1P98194 919 aaPredicted RBP18.05■□□□□ 0.48
SMARCD2-202ENST00000323347 EVX2Q03828 476 aa18.05■□□□□ 0.48
SMARCD2-202ENST00000323347 USP49Q70CQ1 688 aa18.05■□□□□ 0.48
SMARCD2-202ENST00000323347 SH3GLB2Q9NR46 395 aa18.05■□□□□ 0.48
SMARCD2-202ENST00000323347 SERPINC1P01008 464 aa18.04■□□□□ 0.48
SMARCD2-202ENST00000323347 KIF5BP33176 963 aa18.04■□□□□ 0.48
SMARCD2-202ENST00000323347 GSTO1P78417 241 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms