RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 GNPATO15228 680 aa25.58■■□□□ 1.68
PNKP-201ENST00000322344 PDE4BQ07343 736 aa25.58■■□□□ 1.68
PNKP-201ENST00000322344 ANKRD7Q92527 254 aa25.58■■□□□ 1.68
PNKP-201ENST00000322344 FERMT2Q96AC1 680 aa25.58■■□□□ 1.68
PNKP-201ENST00000322344 CSRNP2Q9H175 543 aa25.58■■□□□ 1.68
PNKP-201ENST00000322344 TFCP2L1Q9NZI6 479 aa25.58■■□□□ 1.68
PNKP-201ENST00000322344 MYH2Q9UKX2 1941 aa25.57■■□□□ 1.68
PNKP-201ENST00000322344 MYH13Q9UKX3 1938 aa25.57■■□□□ 1.68
PNKP-201ENST00000322344 FOXN1O15353 648 aa25.57■■□□□ 1.68
PNKP-201ENST00000322344 ACTN4O43707 911 aaKnown RBP25.57■■□□□ 1.68
PNKP-201ENST00000322344 MORC3Q14149 939 aa25.57■■□□□ 1.68
PNKP-201ENST00000322344 RTCBQ9Y3I0 505 aaKnown RBP25.57■■□□□ 1.68
PNKP-201ENST00000322344 TUBB4AP04350 444 aa25.56■■□□□ 1.68
PNKP-201ENST00000322344 ATP2B1P20020 1258 aa25.56■■□□□ 1.68
PNKP-201ENST00000322344 BMP6P22004 513 aa25.56■■□□□ 1.68
PNKP-201ENST00000322344 CNTNAP5Q8WYK1 1306 aa25.56■■□□□ 1.68
PNKP-201ENST00000322344 CFAP100Q494V2 611 aa25.56■■□□□ 1.68
PNKP-201ENST00000322344 CT47A1Q5JQC4 288 aaPredicted RBP25.56■■□□□ 1.68
PNKP-201ENST00000322344 FANCLQ9NW38 375 aa25.56■■□□□ 1.68
PNKP-201ENST00000322344 CCP110O43303 1012 aa25.55■■□□□ 1.68
PNKP-201ENST00000322344 VSTM4Q8IW00 320 aa25.55■■□□□ 1.68
PNKP-201ENST00000322344 ENOX1Q8TC92 643 aaKnown RBP25.55■■□□□ 1.68
PNKP-201ENST00000322344 NGLY1Q96IV0 654 aa25.55■■□□□ 1.68
PNKP-201ENST00000322344 TRMT1Q9NXH9 659 aaKnown RBP25.55■■□□□ 1.68
PNKP-201ENST00000322344 PRDX5P30044 214 aa25.54■■□□□ 1.68
PNKP-201ENST00000322344 TM4SF1P30408 202 aa25.54■■□□□ 1.68
PNKP-201ENST00000322344 SPATA20Q8TB22 786 aa25.54■■□□□ 1.68
PNKP-201ENST00000322344 TNFRSF25Q93038 417 aa25.54■■□□□ 1.68
PNKP-201ENST00000322344 PRR29P0C7W0 189 aa25.54■■□□□ 1.68
PNKP-201ENST00000322344 SMIM5Q71RC9 77 aa25.54■■□□□ 1.68
PNKP-201ENST00000322344 ZNF592Q92610 1267 aa25.54■■□□□ 1.68
PNKP-201ENST00000322344 CCDC94Q9BW85 323 aaPredicted RBP25.54■■□□□ 1.68
PNKP-201ENST00000322344 CCNL1Q9UK58 526 aaPredicted RBP25.54■■□□□ 1.68
PNKP-201ENST00000322344 IRS2Q9Y4H2 1338 aa25.54■■□□□ 1.68
PNKP-201ENST00000322344 PIP4K2BP78356 416 aa25.53■■□□□ 1.68
PNKP-201ENST00000322344 E4F1Q66K89 784 aaPredicted RBP25.53■■□□□ 1.68
PNKP-201ENST00000322344 DZIP1Q86YF9 867 aaKnown RBP25.53■■□□□ 1.68
PNKP-201ENST00000322344 KIF18AQ8NI77 898 aa25.53■■□□□ 1.68
PNKP-201ENST00000322344 DPF2Q92785 391 aa25.53■■□□□ 1.68
PNKP-201ENST00000322344 NHSQ6T4R5 1651 aa25.53■■□□□ 1.68
PNKP-201ENST00000322344 TRAPPC10P48553 1259 aa25.53■■□□□ 1.68
PNKP-201ENST00000322344 C8orf37Q96NL8 207 aa25.53■■□□□ 1.68
PNKP-201ENST00000322344 BTAF1O14981 1849 aa25.52■■□□□ 1.68
PNKP-201ENST00000322344 KIAA1551Q9HCM1 1747 aa25.52■■□□□ 1.68
PNKP-201ENST00000322344 FAM205CA6NFA0 338 aa25.52■■□□□ 1.68
PNKP-201ENST00000322344 TOP1P11387 765 aaKnown RBP25.52■■□□□ 1.68
PNKP-201ENST00000322344 ERCC5P28715 1186 aaPredicted RBP25.52■■□□□ 1.68
PNKP-201ENST00000322344 KIF5BP33176 963 aa25.52■■□□□ 1.68
PNKP-201ENST00000322344 PTF1AQ7RTS3 328 aa25.52■■□□□ 1.68
PNKP-201ENST00000322344 SRBD1Q8N5C6 995 aaKnown RBP25.52■■□□□ 1.68
PNKP-201ENST00000322344 CCDC88AQ3V6T2 1871 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 TSPY2A6NKD2 308 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 SLFN14P0C7P3 912 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 SCG2P13521 617 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 NPY5RQ15761 445 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 EARS2Q5JPH6 523 aaKnown RBP25.51■■□□□ 1.67
PNKP-201ENST00000322344 TTC38Q5R3I4 469 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 PDILTQ8N807 584 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 WDR66Q8TBY9 1149 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 ARHGEF1Q92888 912 aaKnown RBP25.51■■□□□ 1.67
PNKP-201ENST00000322344 LEMD3Q9Y2U8 911 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 hCG_1642624A0A1W2PR95 340 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 FAM47AQ5JRC9 791 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 PDCL2Q8N4E4 241 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 PPP1R13BQ96KQ4 1090 aa25.51■■□□□ 1.67
PNKP-201ENST00000322344 ZNF18P17022 549 aa25.5■■□□□ 1.67
PNKP-201ENST00000322344 PLCD1P51178 756 aa25.5■■□□□ 1.67
PNKP-201ENST00000322344 PFKFB3Q16875 520 aaPredicted RBP25.5■■□□□ 1.67
PNKP-201ENST00000322344 CCDC178Q5BJE1 867 aa25.5■■□□□ 1.67
PNKP-201ENST00000322344 USP49Q70CQ1 688 aa25.5■■□□□ 1.67
PNKP-201ENST00000322344 CYP2D6P10635 497 aa25.49■■□□□ 1.67
PNKP-201ENST00000322344 GSTO1P78417 241 aa25.49■■□□□ 1.67
PNKP-201ENST00000322344 NCBP1Q09161 790 aaKnown RBP25.49■■□□□ 1.67
PNKP-201ENST00000322344 SH3RF1Q7Z6J0 888 aa25.49■■□□□ 1.67
PNKP-201ENST00000322344 FNBP4Q8N3X1 1017 aaPredicted RBP25.49■■□□□ 1.67
PNKP-201ENST00000322344 PYM1Q9BRP8 204 aaKnown RBP25.49■■□□□ 1.67
PNKP-201ENST00000322344 TMX1Q9H3N1 280 aa25.49■■□□□ 1.67
PNKP-201ENST00000322344 NFE2L3Q9Y4A8 694 aa25.49■■□□□ 1.67
PNKP-201ENST00000322344 ATP2C1P98194 919 aaPredicted RBP25.49■■□□□ 1.67
PNKP-201ENST00000322344 FCHSD1Q86WN1 690 aa25.49■■□□□ 1.67
PNKP-201ENST00000322344 DGKHQ86XP1 1220 aa25.49■■□□□ 1.67
PNKP-201ENST00000322344 DHX58Q96C10 678 aa25.49■■□□□ 1.67
PNKP-201ENST00000322344 MCM9Q9NXL9 1143 aa25.49■■□□□ 1.67
PNKP-201ENST00000322344 NPHP1O15259 732 aa25.48■■□□□ 1.67
PNKP-201ENST00000322344 NMT2O60551 498 aa25.48■■□□□ 1.67
PNKP-201ENST00000322344 LDHBP07195 334 aaKnown RBP25.48■■□□□ 1.67
PNKP-201ENST00000322344 NLRP5P59047 1200 aa25.48■■□□□ 1.67
PNKP-201ENST00000322344 FMR1Q06787 632 aaKnown RBP eCLIP25.48■■□□□ 1.67
PNKP-201ENST00000322344 GRAPQ13588 217 aa25.48■■□□□ 1.67
PNKP-201ENST00000322344 TXNRD3Q86VQ6 643 aa25.48■■□□□ 1.67
PNKP-201ENST00000322344 GRAMD1CQ8IYS0 662 aa25.48■■□□□ 1.67
PNKP-201ENST00000322344 GRAPLQ8TC17 118 aaPredicted RBP25.48■■□□□ 1.67
PNKP-201ENST00000322344 ANKS1AQ92625 1134 aa25.48■■□□□ 1.67
PNKP-201ENST00000322344 SYMPKQ92797 1274 aaKnown RBP25.48■■□□□ 1.67
PNKP-201ENST00000322344 CDK11BP21127 795 aaKnown RBP25.47■■□□□ 1.67
PNKP-201ENST00000322344 CALML3P27482 149 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 C12orf60Q5U649 245 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 KAT14Q9H8E8 782 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 EVX2Q03828 476 aa25.47■■□□□ 1.67
PNKP-201ENST00000322344 ZNF174Q15697 407 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms