RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 SLC15A5A6NIM6 579 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 USP17L15C9J2P7 530 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 USP17L13C9JLJ4 530 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 USP17L11C9JVI0 530 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 USP17L18D6R9N7 530 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 USP17L22D6RA61 530 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 USP17L17D6RBQ6 530 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 USP17L19D6RCP7 530 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 USP17L20D6RJB6 530 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 HLA-DOAP06340 250 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 CT47B1P0C2W7 299 aaPredicted RBP24.02■■□□□ 1.44
SSNA1-201ENST00000322310 ATP2B2Q01814 1243 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 USP17L24Q0WX57 530 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 TRPV1Q8NER1 839 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 NPLOC4Q8TAT6 608 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 BTBD7Q9P203 1132 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 PRKAG2Q9UGJ0 569 aa24.02■■□□□ 1.44
SSNA1-201ENST00000322310 LTBP2Q14767 1821 aa24.01■■□□□ 1.43
SSNA1-201ENST00000322310 DNM1LO00429 736 aa24.01■■□□□ 1.43
SSNA1-201ENST00000322310 CDX2Q99626 313 aaPredicted RBP24.01■■□□□ 1.43
SSNA1-201ENST00000322310 DBNDD2Q9BQY9 259 aa24.01■■□□□ 1.43
SSNA1-201ENST00000322310 ATP11BQ9Y2G3 1177 aa24.01■■□□□ 1.43
SSNA1-201ENST00000322310 MSCO60682 206 aa24■■□□□ 1.43
SSNA1-201ENST00000322310 RARSP54136 660 aaKnown RBP24■■□□□ 1.43
SSNA1-201ENST00000322310 RAB3GAP1Q15042 981 aa24■■□□□ 1.43
SSNA1-201ENST00000322310 SHHQ15465 462 aa24■■□□□ 1.43
SSNA1-201ENST00000322310 GJC2Q5T442 439 aaPredicted RBP24■■□□□ 1.43
SSNA1-201ENST00000322310 ATF7IPQ6VMQ6 1270 aa24■■□□□ 1.43
SSNA1-201ENST00000322310 CATSPERGQ6ZRH7 1159 aa24■■□□□ 1.43
SSNA1-201ENST00000322310 PIH1D3Q9NQM4 214 aaKnown RBP24■■□□□ 1.43
SSNA1-201ENST00000322310 CDH23Q9H251 3354 aa24■■□□□ 1.43
SSNA1-201ENST00000322310 PRUNE2Q8WUY3 3088 aa23.99■■□□□ 1.43
SSNA1-201ENST00000322310 GNAI2P04899 355 aa23.99■■□□□ 1.43
SSNA1-201ENST00000322310 HOXC6P09630 235 aa23.99■■□□□ 1.43
SSNA1-201ENST00000322310 VCAM1P19320 739 aa23.99■■□□□ 1.43
SSNA1-201ENST00000322310 ZAP70P43403 619 aa23.99■■□□□ 1.43
SSNA1-201ENST00000322310 GRB14Q14449 540 aa23.99■■□□□ 1.43
SSNA1-201ENST00000322310 C9orf50Q5SZB4 431 aa23.99■■□□□ 1.43
SSNA1-201ENST00000322310 ACER1Q8TDN7 264 aa23.99■■□□□ 1.43
SSNA1-201ENST00000322310 IVNS1ABPQ9Y6Y0 642 aa23.99■■□□□ 1.43
SSNA1-201ENST00000322310 MYO5AQ9Y4I1 1855 aaKnown RBP23.98■■□□□ 1.43
SSNA1-201ENST00000322310 ZNF316A6NFI3 1004 aaPredicted RBP23.98■■□□□ 1.43
SSNA1-201ENST00000322310 TNNI3KQ59H18 835 aa23.98■■□□□ 1.43
SSNA1-201ENST00000322310 CCDC158Q5M9N0 1113 aa23.98■■□□□ 1.43
SSNA1-201ENST00000322310 TATDN1Q6P1N9 297 aa23.98■■□□□ 1.43
SSNA1-201ENST00000322310 TNNQ9UQP3 1299 aa23.98■■□□□ 1.43
SSNA1-201ENST00000322310 FPGT-TNNI3KV9GXZ4 949 aa23.98■■□□□ 1.43
SSNA1-201ENST00000322310 CYBAP13498 195 aa23.97■■□□□ 1.43
SSNA1-201ENST00000322310 ANO1Q5XXA6 986 aa23.97■■□□□ 1.43
SSNA1-201ENST00000322310 MIGA1Q8NAN2 632 aa23.97■■□□□ 1.43
SSNA1-201ENST00000322310 MAFAQ8NHW3 353 aaPredicted RBP23.97■■□□□ 1.43
SSNA1-201ENST00000322310 ARHGAP45Q92619 1136 aa23.97■■□□□ 1.43
SSNA1-201ENST00000322310 KIAA1683Q9H0B3 1180 aa23.97■■□□□ 1.43
SSNA1-201ENST00000322310 SEMA6BQ9H3T3 888 aa23.97■■□□□ 1.43
SSNA1-201ENST00000322310 PRDM5Q9NQX1 630 aaPredicted RBP23.97■■□□□ 1.43
SSNA1-201ENST00000322310 SPDYE16A6NNV3 312 aaPredicted RBP23.96■■□□□ 1.43
SSNA1-201ENST00000322310 IGHA2P01877 340 aa23.96■■□□□ 1.43
SSNA1-201ENST00000322310 CYP7A1P22680 504 aa23.96■■□□□ 1.43
SSNA1-201ENST00000322310 USP14P54578 494 aa23.96■■□□□ 1.43
SSNA1-201ENST00000322310 LBX2Q6XYB7 198 aa23.96■■□□□ 1.43
SSNA1-201ENST00000322310 RPAP3Q9H6T3 665 aaPredicted RBP23.96■■□□□ 1.43
SSNA1-201ENST00000322310 SLC39A5Q6ZMH5 540 aa23.95■■□□□ 1.42
SSNA1-201ENST00000322310 MYLIPQ8WY64 445 aa23.95■■□□□ 1.42
SSNA1-201ENST00000322310 GPR108Q9NPR9 543 aa23.95■■□□□ 1.42
SSNA1-201ENST00000322310 SERPINB13Q9UIV8 391 aa23.95■■□□□ 1.42
SSNA1-201ENST00000322310 MYCNP04198 464 aaPredicted RBP23.94■■□□□ 1.42
SSNA1-201ENST00000322310 USP5P45974 858 aa23.94■■□□□ 1.42
SSNA1-201ENST00000322310 ABCB5Q2M3G0 1257 aa23.94■■□□□ 1.42
SSNA1-201ENST00000322310 TRIM60Q495X7 471 aa23.94■■□□□ 1.42
SSNA1-201ENST00000322310 CERKLQ49MI3 558 aaPredicted RBP23.94■■□□□ 1.42
SSNA1-201ENST00000322310 BADQ92934 168 aa23.94■■□□□ 1.42
SSNA1-201ENST00000322310 MYH1P12882 1939 aa23.94■■□□□ 1.42
SSNA1-201ENST00000322310 RLFQ13129 1914 aa23.94■■□□□ 1.42
SSNA1-201ENST00000322310 IDH1O75874 414 aaKnown RBP23.93■■□□□ 1.42
SSNA1-201ENST00000322310 TRIM27P14373 513 aa23.93■■□□□ 1.42
SSNA1-201ENST00000322310 ADORA2AP29274 412 aa23.93■■□□□ 1.42
SSNA1-201ENST00000322310 OS9Q13438 667 aaPredicted RBP23.93■■□□□ 1.42
SSNA1-201ENST00000322310 DPP9Q86TI2 863 aa23.93■■□□□ 1.42
SSNA1-201ENST00000322310 ARRDC4Q8NCT1 418 aa23.93■■□□□ 1.42
SSNA1-201ENST00000322310 EHD4Q9H223 541 aa23.93■■□□□ 1.42
SSNA1-201ENST00000322310 TTYH1Q9H313 450 aaPredicted RBP23.93■■□□□ 1.42
SSNA1-201ENST00000322310 KBTBD13C9JR72 458 aa23.92■■□□□ 1.42
SSNA1-201ENST00000322310 SH3RF1Q7Z6J0 888 aa23.92■■□□□ 1.42
SSNA1-201ENST00000322310 ZNF512BQ96KM6 892 aaPredicted RBP23.92■■□□□ 1.42
SSNA1-201ENST00000322310 MOV10L1Q9BXT6 1211 aaKnown RBP23.92■■□□□ 1.42
SSNA1-201ENST00000322310 TLR7Q9NYK1 1049 aaKnown RBP23.92■■□□□ 1.42
SSNA1-201ENST00000322310 GUCY1A2P33402 732 aa23.91■■□□□ 1.42
SSNA1-201ENST00000322310 SHMT1P34896 483 aa23.91■■□□□ 1.42
SSNA1-201ENST00000322310 OLFML2BQ68BL8 750 aa23.91■■□□□ 1.42
SSNA1-201ENST00000322310 CLUAP1Q96AJ1 413 aa23.91■■□□□ 1.42
SSNA1-201ENST00000322310 PDLIM7Q9NR12 457 aa23.91■■□□□ 1.42
SSNA1-201ENST00000322310 DBNLQ9UJU6 430 aaKnown RBP23.91■■□□□ 1.42
SSNA1-201ENST00000322310 TRIM43BA6NCK2 446 aa23.9■■□□□ 1.42
SSNA1-201ENST00000322310 ADCYAP1R1P41586 468 aa23.9■■□□□ 1.42
SSNA1-201ENST00000322310 PLCD1P51178 756 aa23.9■■□□□ 1.42
SSNA1-201ENST00000322310 POLA2Q14181 598 aa23.9■■□□□ 1.42
SSNA1-201ENST00000322310 SNX17Q15036 470 aa23.9■■□□□ 1.42
SSNA1-201ENST00000322310 PRAMEF19Q5SWL8 479 aa23.9■■□□□ 1.42
SSNA1-201ENST00000322310 MAGEB6Q8N7X4 407 aa23.9■■□□□ 1.42
SSNA1-201ENST00000322310 FERMT2Q96AC1 680 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms