RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 WASF1Q92558 559 aa30.58■■■□□ 2.49
TM6SF1-202ENST00000322019 GRPEL1Q9HAV7 217 aa30.58■■■□□ 2.49
TM6SF1-202ENST00000322019 GABPAQ06546 454 aa30.57■■■□□ 2.48
TM6SF1-202ENST00000322019 GNL2Q13823 731 aaKnown RBP30.57■■■□□ 2.48
TM6SF1-202ENST00000322019 PPP2R5BQ15173 497 aa30.57■■■□□ 2.48
TM6SF1-202ENST00000322019 SYAP1Q96A49 352 aaPredicted RBP30.57■■■□□ 2.48
TM6SF1-202ENST00000322019 TMEM47Q9BQJ4 181 aa30.57■■■□□ 2.48
TM6SF1-202ENST00000322019 RNF26Q9BY78 433 aaPredicted RBP30.57■■■□□ 2.48
TM6SF1-202ENST00000322019 PANK2Q9BZ23 570 aa30.57■■■□□ 2.48
TM6SF1-202ENST00000322019 TGFB2P61812 414 aa30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 BRAPQ7Z569 592 aa30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 STAG2Q8N3U4 1231 aa30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 TCP11L1Q9NUJ3 509 aa30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 RCOR1Q9UKL0 485 aa30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 ZBTB12Q9Y330 459 aaPredicted RBP30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 PSMD14O00487 310 aa30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 CEP95Q96GE4 821 aa30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 VPS54Q9P1Q0 977 aa30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 SERPINA10Q9UK55 444 aa30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 CNTNAP5Q8WYK1 1306 aa30.56■■■□□ 2.48
TM6SF1-202ENST00000322019 BTBD18B2RXH4 712 aa30.55■■■□□ 2.48
TM6SF1-202ENST00000322019 AKAP17AQ02040 695 aaKnown RBP30.55■■■□□ 2.48
TM6SF1-202ENST00000322019 CCDC183Q5T5S1 534 aa30.55■■■□□ 2.48
TM6SF1-202ENST00000322019 CLEC10AQ8IUN9 316 aa30.55■■■□□ 2.48
TM6SF1-202ENST00000322019 NEDD1Q8NHV4 660 aa30.55■■■□□ 2.48
TM6SF1-202ENST00000322019 ANKS1AQ92625 1134 aa30.55■■■□□ 2.48
TM6SF1-202ENST00000322019 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.55■■■□□ 2.48
TM6SF1-202ENST00000322019 TDRD3Q9H7E2 651 aaKnown RBP30.55■■■□□ 2.48
TM6SF1-202ENST00000322019 FAM198AQ9UFP1 575 aa30.55■■■□□ 2.48
TM6SF1-202ENST00000322019 SERPINB13Q9UIV8 391 aa30.55■■■□□ 2.48
TM6SF1-202ENST00000322019 FAM196BA6NMK8 535 aa30.54■■■□□ 2.48
TM6SF1-202ENST00000322019 MMP1P03956 469 aa30.54■■■□□ 2.48
TM6SF1-202ENST00000322019 CFAP100Q494V2 611 aa30.54■■■□□ 2.48
TM6SF1-202ENST00000322019 BICD2Q8TD16 824 aa30.54■■■□□ 2.48
TM6SF1-202ENST00000322019 MYH6P13533 1939 aa30.54■■■□□ 2.48
TM6SF1-202ENST00000322019 AKR1B1P15121 316 aa30.54■■■□□ 2.48
TM6SF1-202ENST00000322019 MRIQ9BWK5 157 aa30.54■■■□□ 2.48
TM6SF1-202ENST00000322019 VEGFAP15692 232 aaPredicted RBP30.53■■■□□ 2.48
TM6SF1-202ENST00000322019 HDLBPQ00341 1268 aaKnown RBP30.53■■■□□ 2.48
TM6SF1-202ENST00000322019 GRIPAP1Q4V328 841 aa30.53■■■□□ 2.48
TM6SF1-202ENST00000322019 DALRD3Q5D0E6 543 aaKnown RBP30.53■■■□□ 2.48
TM6SF1-202ENST00000322019 PRMT6Q96LA8 375 aaPredicted RBP30.53■■■□□ 2.48
TM6SF1-202ENST00000322019 PRPF3O43395 683 aaKnown RBP30.53■■■□□ 2.48
TM6SF1-202ENST00000322019 LRSAM1Q6UWE0 723 aa30.53■■■□□ 2.48
TM6SF1-202ENST00000322019 DIS3L2Q8IYB7 885 aaKnown RBP30.53■■■□□ 2.48
TM6SF1-202ENST00000322019 OXER1Q8TDS5 423 aa30.53■■■□□ 2.48
TM6SF1-202ENST00000322019 RTEL1Q9NZ71 1219 aa30.53■■■□□ 2.48
TM6SF1-202ENST00000322019 DDTLA6NHG4 134 aaPredicted RBP30.52■■■□□ 2.48
TM6SF1-202ENST00000322019 U2AF2P26368 475 aaKnown RBP eCLIP30.52■■■□□ 2.481e-7■■□□□ 12.3
TM6SF1-202ENST00000322019 EIF6P56537 245 aaKnown RBP30.52■■■□□ 2.48
TM6SF1-202ENST00000322019 NR5A1Q13285 461 aa30.52■■■□□ 2.48
TM6SF1-202ENST00000322019 GOLGA8HP0CJ92 632 aa30.51■■■□□ 2.48
TM6SF1-202ENST00000322019 SHMT1P34896 483 aa30.51■■■□□ 2.48
TM6SF1-202ENST00000322019 ME1P48163 572 aa30.51■■■□□ 2.48
TM6SF1-202ENST00000322019 MRE11P49959 708 aa30.51■■■□□ 2.48
TM6SF1-202ENST00000322019 ATL3Q6DD88 541 aa30.51■■■□□ 2.48
TM6SF1-202ENST00000322019 RSBN1LQ6PCB5 846 aaPredicted RBP30.51■■■□□ 2.48
TM6SF1-202ENST00000322019 SH3BP5LQ7L8J4 393 aa30.51■■■□□ 2.48
TM6SF1-202ENST00000322019 DACT1Q9NYF0 836 aa30.51■■■□□ 2.48
TM6SF1-202ENST00000322019 NT5C2P49902 561 aa30.51■■■□□ 2.47
TM6SF1-202ENST00000322019 LINC00301Q8NCQ3 95 aa30.51■■■□□ 2.47
TM6SF1-202ENST00000322019 MAD2L2Q9UI95 211 aa30.51■■■□□ 2.47
TM6SF1-202ENST00000322019 NR1I2O75469 434 aa30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 ZSCAN29Q8IWY8 852 aaPredicted RBP30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 UPF1Q92900 1129 aaKnown RBP eCLIP30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 SGIP1Q9BQI5 828 aa30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 DNAJC18Q9H819 358 aa30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 CAMK4Q16566 473 aa30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 SLC35G1Q2M3R5 365 aa30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 CCDC178Q5BJE1 867 aa30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 RGS22Q8NE09 1264 aa30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 RBSNQ9H1K0 784 aa30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 CPVLQ9H3G5 476 aa30.5■■■□□ 2.47
TM6SF1-202ENST00000322019 HLA-DOAP06340 250 aa30.49■■■□□ 2.47
TM6SF1-202ENST00000322019 KIF5BP33176 963 aa30.49■■■□□ 2.47
TM6SF1-202ENST00000322019 GRM4Q14833 912 aa30.49■■■□□ 2.47
TM6SF1-202ENST00000322019 STK38Q15208 465 aa30.49■■■□□ 2.47
TM6SF1-202ENST00000322019 SHROOM1Q2M3G4 852 aaPredicted RBP30.49■■■□□ 2.47
TM6SF1-202ENST00000322019 VIL1P09327 827 aaKnown RBP30.48■■■□□ 2.47
TM6SF1-202ENST00000322019 ANO1Q5XXA6 986 aa30.48■■■□□ 2.47
TM6SF1-202ENST00000322019 NOSTRINQ8IVI9 506 aa30.48■■■□□ 2.47
TM6SF1-202ENST00000322019 NIM1KQ8IY84 436 aa30.48■■■□□ 2.47
TM6SF1-202ENST00000322019 IDI2Q9BXS1 227 aa30.48■■■□□ 2.47
TM6SF1-202ENST00000322019 GOLPH3LQ9H4A5 285 aa30.48■■■□□ 2.47
TM6SF1-202ENST00000322019 POLR3EQ9NVU0 708 aa30.48■■■□□ 2.47
TM6SF1-202ENST00000322019 ISY1Q9ULR0 285 aaKnown RBP30.48■■■□□ 2.47
TM6SF1-202ENST00000322019 PCDHA7Q9UN72 937 aa30.48■■■□□ 2.47
TM6SF1-202ENST00000322019 SAFBQ15424 915 aaKnown RBP eCLIP30.48■■■□□ 2.47
TM6SF1-202ENST00000322019 PSME4Q14997 1843 aa30.47■■■□□ 2.47
TM6SF1-202ENST00000322019 SF3A1Q15459 793 aaKnown RBP30.47■■■□□ 2.47
TM6SF1-202ENST00000322019 BCS1LQ9Y276 419 aa30.47■■■□□ 2.47
TM6SF1-202ENST00000322019 NASPP49321 788 aaPredicted RBP30.46■■■□□ 2.47
TM6SF1-202ENST00000322019 SOGA3Q5TF21 947 aa30.46■■■□□ 2.47
TM6SF1-202ENST00000322019 GMLQ99445 158 aa30.46■■■□□ 2.47
TM6SF1-202ENST00000322019 ZNRF3Q9ULT6 936 aa30.46■■■□□ 2.47
TM6SF1-202ENST00000322019 CLRN2A0PK11 232 aa30.46■■■□□ 2.47
TM6SF1-202ENST00000322019 USP17L2Q6R6M4 530 aa30.46■■■□□ 2.47
TM6SF1-202ENST00000322019 CCAR1Q8IX12 1150 aaKnown RBP30.46■■■□□ 2.47
TM6SF1-202ENST00000322019 LRRC47Q8N1G4 583 aaKnown RBP30.46■■■□□ 2.47
TM6SF1-202ENST00000322019 MTMR4Q9NYA4 1195 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms