RNA–Protein interactions for RNA: ENST00000320954.10

CRTAP-201, Transcript of cartilage associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CRTAP, Length 6,630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-201ENST00000320954 POLA2Q14181 598 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 MCM6Q14566 821 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 MTERF4Q7Z6M4 381 aaKnown RBP13.01□□□□□ -0.33
CRTAP-201ENST00000320954 SYNDIG1Q9H7V2 258 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 KCNQ3O43525 872 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 PRR16Q569H4 304 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 XKR9Q5GH70 373 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 SUCLG2Q96I99 432 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 LRRIQ4A6NIV6 560 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 UBE2HP62256 183 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 GPATCH11Q8N954 259 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 CCDC110Q8TBZ0 833 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 SLC10A4Q96EP9 437 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 LMCD1Q9NZU5 365 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 SYT1P21579 422 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 FAM227BQ96M60 508 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 PLEKHG3A1L390 1219 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 EYA2O00167 538 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
CRTAP-201ENST00000320954 MYL3P08590 195 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 CEP85Q6P2H3 762 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 MICALCLQ6ZW33 695 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 GDF11O95390 407 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 PPP2R5AQ15172 486 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 RSPH3Q86UC2 560 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 RPUSD2Q8IZ73 545 aaKnown RBP13□□□□□ -0.33
CRTAP-201ENST00000320954 EHBP1Q8NDI1 1231 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 CCPG1Q9ULG6 757 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 TACC3Q9Y6A5 838 aa13□□□□□ -0.33
CRTAP-201ENST00000320954 CFAP57Q96MR6 1250 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 RHOXF2BP0C7M4 288 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 TMTC4Q5T4D3 741 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 OTUD6AQ7L8S5 288 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 RHOXF2Q9BQY4 288 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 BLZF1Q9H2G9 400 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
CRTAP-201ENST00000320954 PCDHB15Q9Y5E8 787 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 LIG4P49917 911 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 SNAP25P60880 206 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
CRTAP-201ENST00000320954 DLATP10515 647 aaKnown RBP12.99□□□□□ -0.33
CRTAP-201ENST00000320954 MARK3P27448 753 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 DALRD3Q5D0E6 543 aaKnown RBP12.99□□□□□ -0.33
CRTAP-201ENST00000320954 EDC3Q96F86 508 aaKnown RBP12.99□□□□□ -0.33
CRTAP-201ENST00000320954 ADPGKQ9BRR6 497 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 DDX21Q9NR30 783 aaKnown RBP eCLIP12.99□□□□□ -0.33
CRTAP-201ENST00000320954 PSMB7Q99436 277 aa12.99□□□□□ -0.33
CRTAP-201ENST00000320954 ZNF569Q5MCW4 686 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 VPS54Q9P1Q0 977 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 KIF2AO00139 706 aaPredicted RBP12.98□□□□□ -0.33
CRTAP-201ENST00000320954 POLGP54098 1239 aaPredicted RBP12.98□□□□□ -0.33
CRTAP-201ENST00000320954 KRT81Q14533 505 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 C1orf228Q6PIY5 440 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 TTLL7Q6ZT98 887 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 NME8Q8N427 588 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
CRTAP-201ENST00000320954 ANKRD44Q8N8A2 993 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 NAP1L3Q99457 506 aaPredicted RBP12.98□□□□□ -0.33
CRTAP-201ENST00000320954 PCDHB13Q9Y5F0 798 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 WDR62O43379 1518 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 BTDP43251 543 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 MTUS1Q9ULD2 1270 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 ASIC2Q16515 512 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 ASXL1Q8IXJ9 1541 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 CTAGE15A4D2H0 777 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 CTAGE8P0CG41 777 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 CALCOCO2Q13137 446 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 DHX32Q7L7V1 743 aaKnown RBP12.98□□□□□ -0.33
CRTAP-201ENST00000320954 CTAGE6Q86UF2 777 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 CTAGE4Q8IX94 777 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 IQUBQ8NA54 791 aa12.98□□□□□ -0.33
CRTAP-201ENST00000320954 SEPT9Q9UHD8 586 aaPredicted RBP12.98□□□□□ -0.33
CRTAP-201ENST00000320954 ZEB2O60315 1214 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 RUFY3Q7L099 469 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 CHURC1Q8WUH1 139 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 MKRN1Q9UHC7 482 aaKnown RBP12.97□□□□□ -0.33
CRTAP-201ENST00000320954 POLR2DO15514 142 aaKnown RBP12.97□□□□□ -0.33
CRTAP-201ENST00000320954 C21orf2O43822 256 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 OSTNP61366 133 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 ZBTB8OSQ8IWT0 167 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 RNF217Q8TC41 542 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 LRWD1Q9UFC0 647 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 TMEM232C9JQI7 657 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 ZSCAN20P17040 1043 aaPredicted RBP12.97□□□□□ -0.33
CRTAP-201ENST00000320954 POMGNT1Q8WZA1 660 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 CTSWP56202 376 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 NAA25Q14CX7 972 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 ZSCAN23Q3MJ62 389 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 SND1Q7KZF4 910 aaKnown RBP eCLIP12.97□□□□□ -0.334e-7■■■■■ 30.2
CRTAP-201ENST00000320954 TRIM50Q86XT4 487 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 LPIN2Q92539 896 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 CSRNP1Q96S65 589 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 SLC12A2P55011 1212 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
CRTAP-201ENST00000320954 CLUL1Q15846 466 aa12.96□□□□□ -0.33
CRTAP-201ENST00000320954 KCTD1Q719H9 257 aa12.96□□□□□ -0.33
CRTAP-201ENST00000320954 ACRBPQ8NEB7 543 aa12.96□□□□□ -0.33
CRTAP-201ENST00000320954 FLAD1Q8NFF5 587 aa12.96□□□□□ -0.33
CRTAP-201ENST00000320954 CTTNBP2NLQ9P2B4 639 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms