RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 C2orf54Q08AI8 447 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 MED15Q96RN5 788 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 SH3TC1Q8TE82 1336 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 GOLGA6L9A6NEM1 432 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 NBPF26B4DH59 902 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 NBPF14Q5TI25 921 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 RESP18Q5W5W9 173 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 NBPF10Q6P3W6 841 aaKnown RBP16.06■□□□□ 0.16
PABPC1-201ENST00000318607 NBPF15Q8N660 670 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 SYMPKQ92797 1274 aaKnown RBP16.06■□□□□ 0.16
PABPC1-201ENST00000318607 SALL1Q9NSC2 1324 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 MCAMP43121 646 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 FOXO4P98177 505 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 PTPAQ15257 358 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 MFSD6Q6ZSS7 791 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 SND1Q7KZF4 910 aaKnown RBP eCLIP16.05■□□□□ 0.16
PABPC1-201ENST00000318607 PROCA1Q8NCQ7 364 aaPredicted RBP16.05■□□□□ 0.16
PABPC1-201ENST00000318607 AFAP1L1Q8TED9 768 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 LRP2BPQ9P2M1 347 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 DACH1Q9UI36 760 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 MYO6Q9UM54 1294 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 GDAQ9Y2T3 454 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.05■□□□□ 0.16
PABPC1-201ENST00000318607 CEMIPQ8WUJ3 1361 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 RSRC2Q7L4I2 434 aaKnown RBP16.05■□□□□ 0.16
PABPC1-201ENST00000318607 PIH1D3Q9NQM4 214 aaKnown RBP16.05■□□□□ 0.16
PABPC1-201ENST00000318607 TUBE1Q9UJT0 475 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 PXDNQ92626 1479 aa16.05■□□□□ 0.16
PABPC1-201ENST00000318607 BACH1O14867 736 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 GGCXP38435 758 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 WTAPQ15007 396 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 MAP9Q49MG5 647 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 RUFY1Q96T51 708 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 MMS19Q96T76 1030 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 BCCIPQ9P287 314 aaKnown RBP eCLIP16.04■□□□□ 0.16
PABPC1-201ENST00000318607 TRIM21P19474 475 aaKnown RBP16.04■□□□□ 0.16
PABPC1-201ENST00000318607 TOB1P50616 345 aaPredicted RBP16.04■□□□□ 0.16
PABPC1-201ENST00000318607 ARID5AQ03989 594 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 KRT28Q7Z3Y7 464 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 ANKRD20A12PQ8NF67 263 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 RASGRP4Q8TDF6 673 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 IFT81Q8WYA0 676 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 RGPD1P0DJD0 1748 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 CICQ96RK0 1608 aaPredicted RBP16.04■□□□□ 0.16
PABPC1-201ENST00000318607 BRD3Q15059 726 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 IFNL2Q8IZJ0 200 aa16.04■□□□□ 0.16
PABPC1-201ENST00000318607 A0A087X0B3 334 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 FOXP2O15409 715 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 EZH2Q15910 746 aaKnown RBP16.03■□□□□ 0.16
PABPC1-201ENST00000318607 FAM43BQ6ZT52 329 aaPredicted RBP16.03■□□□□ 0.16
PABPC1-201ENST00000318607 ANKLE2Q86XL3 938 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 NOC3LQ8WTT2 800 aaKnown RBP16.03■□□□□ 0.16
PABPC1-201ENST00000318607 ATP1A1P05023 1023 aaKnown RBP16.03■□□□□ 0.16
PABPC1-201ENST00000318607 EARS2Q5JPH6 523 aaKnown RBP16.03■□□□□ 0.16
PABPC1-201ENST00000318607 LRRC31Q6UY01 552 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 MLKLQ8NB16 471 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 BCAS4Q8TDM0 211 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 ACBD3Q9H3P7 528 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 TRIM75PA6NK02 468 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 WNT7AO00755 349 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 STIM1Q13586 685 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 CCDC96Q2M329 555 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 KRT26Q7Z3Y9 468 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 PLBD2Q8NHP8 589 aa16.03■□□□□ 0.16
PABPC1-201ENST00000318607 GYPCP04921 128 aa16.02■□□□□ 0.16
PABPC1-201ENST00000318607 IVLP07476 585 aa16.02■□□□□ 0.16
PABPC1-201ENST00000318607 PIK3AP1Q6ZUJ8 805 aa16.02■□□□□ 0.16
PABPC1-201ENST00000318607 SH2D3CQ8N5H7 860 aa16.02■□□□□ 0.16
PABPC1-201ENST00000318607 BPIFA3Q9BQP9 254 aa16.02■□□□□ 0.16
PABPC1-201ENST00000318607 GREM2Q9H772 168 aa16.02■□□□□ 0.16
PABPC1-201ENST00000318607 ZMYM6O95789 1325 aa16.02■□□□□ 0.16
PABPC1-201ENST00000318607 ESYT3A0FGR9 886 aa16.02■□□□□ 0.15
PABPC1-201ENST00000318607 CYP27B1O15528 508 aa16.02■□□□□ 0.15
PABPC1-201ENST00000318607 IDEP14735 1019 aa16.02■□□□□ 0.15
PABPC1-201ENST00000318607 KLK7P49862 253 aa16.02■□□□□ 0.15
PABPC1-201ENST00000318607 ERVK-24P63145 666 aa16.02■□□□□ 0.15
PABPC1-201ENST00000318607 PHKG2P15735 406 aa16.02■□□□□ 0.15
PABPC1-201ENST00000318607 TRMT112Q9UI30 125 aaKnown RBP16.02■□□□□ 0.15
PABPC1-201ENST00000318607 L1RE1Q9UN81 338 aa16.02■□□□□ 0.15
PABPC1-201ENST00000318607 ADAMTS7Q9UKP4 1686 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 ITGA6P23229 1130 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 DPYDQ12882 1025 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 KRT31Q15323 416 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 TRIM47Q96LD4 638 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 GOLGA6CA6NDK9 693 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 PP2D1A8MPX8 630 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 SH2B2O14492 632 aaPredicted RBP16.01■□□□□ 0.15
PABPC1-201ENST00000318607 MFAP3LO75121 409 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 GOLGA6DP0CG33 693 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 HPDP32754 393 aaPredicted RBP16.01■□□□□ 0.15
PABPC1-201ENST00000318607 MAP3K14Q99558 947 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 GOLGA6AQ9NYA3 693 aa16.01■□□□□ 0.15
PABPC1-201ENST00000318607 MYO1BO43795 1136 aa16■□□□□ 0.15
PABPC1-201ENST00000318607 MYBL2P10244 700 aa16■□□□□ 0.15
PABPC1-201ENST00000318607 GUCY2FP51841 1108 aa16■□□□□ 0.15
PABPC1-201ENST00000318607 CUL4BQ13620 913 aa16■□□□□ 0.15
PABPC1-201ENST00000318607 CCDC181Q5TID7 509 aa16■□□□□ 0.15
PABPC1-201ENST00000318607 ICE2Q659A1 982 aa16■□□□□ 0.15
PABPC1-201ENST00000318607 ARHGEF25Q86VW2 580 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms