RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 TTLL12Q14166 644 aaPredicted RBP16.51■□□□□ 0.23
MSRA-201ENST00000317173 WTAPQ15007 396 aa16.51■□□□□ 0.23
MSRA-201ENST00000317173 SH3BP5LQ7L8J4 393 aa16.51■□□□□ 0.23
MSRA-201ENST00000317173 CRACR2BQ8N4Y2 399 aaPredicted RBP16.51■□□□□ 0.23
MSRA-201ENST00000317173 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
MSRA-201ENST00000317173 CCDC17Q96LX7 622 aa16.51■□□□□ 0.23
MSRA-201ENST00000317173 ZSCAN10Q96SZ4 725 aaPredicted RBP16.51■□□□□ 0.23
MSRA-201ENST00000317173 TRIM34Q9BYJ4 488 aa16.51■□□□□ 0.23
MSRA-201ENST00000317173 LY9Q9HBG7 655 aa16.51■□□□□ 0.23
MSRA-201ENST00000317173 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.51■□□□□ 0.23
MSRA-201ENST00000317173 AOC2O75106 756 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 TSPY3P0CV98 308 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 TSPY8P0CW00 308 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
MSRA-201ENST00000317173 TFAP4Q01664 338 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 APOBRQ0VD83 1088 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 SEC23AQ15436 765 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 SUPT20HL1Q3ZLR7 823 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 ARMC9Q7Z3E5 817 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 SLC44A5Q8NCS7 719 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 NEDD1Q8NHV4 660 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 CSRNP1Q96S65 589 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 SLKQ9H2G2 1235 aaPredicted RBP16.5■□□□□ 0.23
MSRA-201ENST00000317173 CWC22Q9HCG8 908 aaKnown RBP16.5■□□□□ 0.23
MSRA-201ENST00000317173 FOXN1O15353 648 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 TBC1D12O60347 775 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 PFKFB2O60825 505 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 SLC10A3P09131 477 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 PPP4R3BQ5MIZ7 849 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 DGKHQ86XP1 1220 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 ANKS1AQ92625 1134 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 GTF3C6Q969F1 213 aa16.5■□□□□ 0.23
MSRA-201ENST00000317173 NID2Q14112 1375 aa16.49■□□□□ 0.23
MSRA-201ENST00000317173 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
MSRA-201ENST00000317173 CCDC69A6NI79 296 aa16.49■□□□□ 0.23
MSRA-201ENST00000317173 FAM155AB1AL88 458 aaPredicted RBP16.49■□□□□ 0.23
MSRA-201ENST00000317173 CA12O43570 354 aa16.49■□□□□ 0.23
MSRA-201ENST00000317173 LARGE1O95461 756 aa16.49■□□□□ 0.23
MSRA-201ENST00000317173 PDIA3P30101 505 aaKnown RBP16.49■□□□□ 0.23
MSRA-201ENST00000317173 SHMT1P34896 483 aa16.49■□□□□ 0.23
MSRA-201ENST00000317173 RASA3Q14644 834 aa16.49■□□□□ 0.23
MSRA-201ENST00000317173 FAM47AQ5JRC9 791 aa16.49■□□□□ 0.23
MSRA-201ENST00000317173 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
MSRA-201ENST00000317173 SYNE3Q6ZMZ3 975 aa16.49■□□□□ 0.23
MSRA-201ENST00000317173 LARP6Q9BRS8 491 aaKnown RBP16.49■□□□□ 0.23
MSRA-201ENST00000317173 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
MSRA-201ENST00000317173 PPP1R12BO60237 982 aaPredicted RBP16.48■□□□□ 0.23
MSRA-201ENST00000317173 IFIT1BQ5T764 474 aaKnown RBP16.48■□□□□ 0.23
MSRA-201ENST00000317173 APOA5Q6Q788 366 aa16.48■□□□□ 0.23
MSRA-201ENST00000317173 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
MSRA-201ENST00000317173 ENAHQ8N8S7 591 aaPredicted RBP16.48■□□□□ 0.23
MSRA-201ENST00000317173 ZKSCAN3Q9BRR0 538 aa16.48■□□□□ 0.23
MSRA-201ENST00000317173 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
MSRA-201ENST00000317173 GPHNQ9NQX3 736 aaPredicted RBP16.48■□□□□ 0.23
MSRA-201ENST00000317173 SLC12A7Q9Y666 1083 aa16.48■□□□□ 0.23
MSRA-201ENST00000317173 GOLGA8BA8MQT2 603 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 UBE2Q2LH0YL09 131 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 ZBTB43O43298 467 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 NOVP48745 357 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 PPP2R5BQ15173 497 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 MOB2Q70IA6 237 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 RASAL3Q86YV0 1011 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 CCDC83Q8IWF9 413 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 REM2Q8IYK8 340 aaPredicted RBP16.47■□□□□ 0.23
MSRA-201ENST00000317173 HOOK2Q96ED9 719 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 DNAJC18Q9H819 358 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
MSRA-201ENST00000317173 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
MSRA-201ENST00000317173 UNCXA6NJT0 531 aa16.46■□□□□ 0.23
MSRA-201ENST00000317173 CALM1P0DP23 149 aa16.46■□□□□ 0.23
MSRA-201ENST00000317173 CALM2P0DP24 149 aa16.46■□□□□ 0.23
MSRA-201ENST00000317173 CALM3P0DP25 149 aa16.46■□□□□ 0.23
MSRA-201ENST00000317173 MAP3K10Q02779 954 aa16.46■□□□□ 0.23
MSRA-201ENST00000317173 SCRN1Q12765 414 aa16.46■□□□□ 0.23
MSRA-201ENST00000317173 MAP3K11Q16584 847 aa16.46■□□□□ 0.23
MSRA-201ENST00000317173 TMEM39BQ9GZU3 492 aa16.46■□□□□ 0.23
MSRA-201ENST00000317173 PRDM10Q9NQV6 1147 aa16.46■□□□□ 0.23
MSRA-201ENST00000317173 SSC5DA1L4H1 1573 aa16.46■□□□□ 0.23
MSRA-201ENST00000317173 DDAH1O94760 285 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 ST3GAL1Q11201 340 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
MSRA-201ENST00000317173 LDLRAD1Q5T700 205 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 ZNF654Q8IZM8 581 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 NECAB1Q8N987 351 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.45■□□□□ 0.223e-7■■■■■ 36.9
MSRA-201ENST00000317173 IL17RBQ9NRM6 502 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 NAP1L2Q9ULW6 460 aaPredicted RBP16.45■□□□□ 0.22
MSRA-201ENST00000317173 MYH4Q9Y623 1939 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 IGKV6D-41A0A0C4DH26 115 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 CCDC196A0A1B0GTZ2 297 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 PDIA4P13667 645 aaKnown RBP16.45■□□□□ 0.22
MSRA-201ENST00000317173 AKR1B1P15121 316 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 DDIT3P35638 169 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
MSRA-201ENST00000317173 METAP2P50579 478 aaKnown RBP eCLIP16.45■□□□□ 0.22
MSRA-201ENST00000317173 KIF23Q02241 960 aaPredicted RBP16.45■□□□□ 0.22
MSRA-201ENST00000317173 STK3Q13188 491 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 PRKG1Q13976 671 aa16.45■□□□□ 0.22
MSRA-201ENST00000317173 NBPF12Q5TAG4 269 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms