RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 FOXD4L5Q5VV16 416 aaPredicted RBP8.32□□□□□ -1.08
NPHP1-201ENST00000316534 CDC42EP5Q6NZY7 148 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 CATIPQ7Z7H3 387 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 FOXD4L4Q8WXT5 416 aaPredicted RBP8.32□□□□□ -1.08
NPHP1-201ENST00000316534 AIFM3Q96NN9 605 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 TSPY26PQ9H489 355 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 ZNF287Q9HBT7 754 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 VIL1P09327 827 aaKnown RBP8.32□□□□□ -1.08
NPHP1-201ENST00000316534 FAM160A1Q05DH4 1040 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 FERMT3Q86UX7 667 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 MICU3Q86XE3 530 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 PHKBQ93100 1093 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 MCM9Q9NXL9 1143 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 MINDY4BA8MYZ0 360 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 hCG_1984214I3L0E3 225 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 DTNBO60941 627 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 NR1I2O75469 434 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 SHMT1P34896 483 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 NT5DC1Q5TFE4 455 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 FKBP1CQ5VVH2 108 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 GALNT17Q6IS24 598 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 OLFM4Q6UX06 510 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 TEX2Q8IWB9 1127 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 ZNF713Q8N859 430 aaPredicted RBP8.31□□□□□ -1.08
NPHP1-201ENST00000316534 TGFBRAP1Q8WUH2 860 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 RIOX1Q9H6W3 641 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 RLFQ13129 1914 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 ESYT2A0FGR8 921 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 UBE2Q2LH0YL09 131 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 ECE2O60344 883 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 PLEKHA8P1O95397 391 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 TRAPPC10P48553 1259 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 MDM2Q00987 491 aaPredicted RBP8.31□□□□□ -1.08
NPHP1-201ENST00000316534 STK11IPQ8N1F8 1099 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 NOL10Q9BSC4 688 aaKnown RBP8.31□□□□□ -1.08
NPHP1-201ENST00000316534 ZC3H12CQ9C0D7 883 aaKnown RBP8.31□□□□□ -1.08
NPHP1-201ENST00000316534 FBXO2Q9UK22 296 aaPredicted RBP8.31□□□□□ -1.08
NPHP1-201ENST00000316534 MRVI1Q9Y6F6 885 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 CPLX1O14810 134 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 NCLP19338 710 aaKnown RBP8.31□□□□□ -1.08
NPHP1-201ENST00000316534 GTF2IP78347 998 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 SYNE3Q6ZMZ3 975 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 TEX11Q8IYF3 940 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 RTKN2Q8IZC4 609 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 C4orf32Q8N8J7 132 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 ZKSCAN3Q9BRR0 538 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 MYL10Q9BUA6 226 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 PANK2Q9BZ23 570 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 GZF1Q9H116 711 aaPredicted RBP8.31□□□□□ -1.08
NPHP1-201ENST00000316534 DNAJC18Q9H819 358 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 GJB4Q9NTQ9 266 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 FAM198AQ9UFP1 575 aa8.31□□□□□ -1.08
NPHP1-201ENST00000316534 NMT2O60551 498 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 ENTPD3O75355 529 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 CRKP46108 304 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 BAG6P46379 1132 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 ORC2Q13416 577 aaPredicted RBP8.3□□□□□ -1.08
NPHP1-201ENST00000316534 RILPL1Q5EBL4 403 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 SPATA20Q8TB22 786 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 TMEM47Q9BQJ4 181 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 FTOQ9C0B1 505 aaKnown RBP eCLIP8.3□□□□□ -1.08
NPHP1-201ENST00000316534 TUBE1Q9UJT0 475 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 CNTNAP1P78357 1384 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 USP17L3A6NCW0 530 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 USP17L4A6NCW7 530 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 CYTH3O43739 400 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 CUTAO60888 179 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 PTPREP23469 700 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 GNAQP50148 359 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 TFAP4Q01664 338 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 SH3BP5LQ7L8J4 393 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 USP17L1Q7RTZ2 530 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 DYNLL2Q96FJ2 89 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 DHX36Q9H2U1 1008 aaKnown RBP8.3□□□□□ -1.08
NPHP1-201ENST00000316534 SPTLC2O15270 562 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 USP5P45974 858 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 SOGA3Q5TF21 947 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 NFXL1Q6ZNB6 911 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 TRIM22Q8IYM9 498 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 SLC26A6Q9BXS9 759 aa8.3□□□□□ -1.08
NPHP1-201ENST00000316534 TFIP11Q9UBB9 837 aaKnown RBP8.3□□□□□ -1.08
NPHP1-201ENST00000316534 C6orf229H3BNL8 230 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 TOP1P11387 765 aaKnown RBP8.29□□□□□ -1.08
NPHP1-201ENST00000316534 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 OTUD7BQ6GQQ9 843 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 SHC4Q6S5L8 630 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 MRPS27Q92552 414 aaKnown RBP8.29□□□□□ -1.08
NPHP1-201ENST00000316534 TEKT1Q969V4 418 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 MTMR4Q9NYA4 1195 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 SRPRBQ9Y5M8 271 aaKnown RBP8.29□□□□□ -1.08
NPHP1-201ENST00000316534 STXBP3O00186 592 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 TBC1D12O60347 775 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 SCG2P13521 617 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 RXRAP19793 462 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 KIF5BP33176 963 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 TERF1P54274 439 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 PPP1R18Q6NYC8 613 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 NUP62CLQ9H1M0 184 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 DACT1Q9NYF0 836 aa8.29□□□□□ -1.08
NPHP1-201ENST00000316534 NPHP1O15259 732 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms