RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TMEM174Q8WUU8 243 aa9.11□□□□□ -0.95
CNOT4-201ENST00000315544 MAN1B1Q9UKM7 699 aa9.11□□□□□ -0.95
CNOT4-201ENST00000315544 PCDHA2Q9Y5H9 948 aa9.11□□□□□ -0.95
CNOT4-201ENST00000315544 MROH5Q6ZUA9 1318 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 FAM205CA6NFA0 338 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 PATL2C9JE40 543 aaKnown RBP9.1□□□□□ -0.95
CNOT4-201ENST00000315544 HNRNPH3P31942 346 aaKnown RBP9.1□□□□□ -0.95
CNOT4-201ENST00000315544 CAMK4Q16566 473 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 RASGRP2Q7LDG7 609 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 HNRNPLLQ8WVV9 542 aaKnown RBP9.1□□□□□ -0.95
CNOT4-201ENST00000315544 MTMR8Q96EF0 704 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 AATFQ9NY61 560 aaKnown RBP eCLIP9.1□□□□□ -0.95
CNOT4-201ENST00000315544 PRPF6O94906 941 aaKnown RBP9.1□□□□□ -0.95
CNOT4-201ENST00000315544 FAM193AP78312 1265 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 OTUD7BQ6GQQ9 843 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 VPS37DQ86XT2 251 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 SYAP1Q96A49 352 aaPredicted RBP9.1□□□□□ -0.95
CNOT4-201ENST00000315544 FUT8Q9BYC5 575 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 ANGEL1Q9UNK9 670 aaKnown RBP9.1□□□□□ -0.95
CNOT4-201ENST00000315544 FAM205AQ6ZU69 1335 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 ORC4O43929 436 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 SBK1Q52WX2 424 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 MIIPQ5JXC2 388 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 KRBA2Q6ZNG9 492 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 ENOX1Q8TC92 643 aaKnown RBP9.1□□□□□ -0.95
CNOT4-201ENST00000315544 FSD1Q9BTV5 496 aa9.1□□□□□ -0.95
CNOT4-201ENST00000315544 MMTAG2Q9BU76 263 aaKnown RBP9.1□□□□□ -0.95
CNOT4-201ENST00000315544 MRPL44Q9H9J2 332 aaKnown RBP9.1□□□□□ -0.95
CNOT4-201ENST00000315544 MYH11P35749 1972 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 MYH10P35580 1976 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 CYTH3O43739 400 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 SLC20A2Q08357 652 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 G3BP1Q13283 466 aaKnown RBP eCLIP9.09□□□□□ -0.95
CNOT4-201ENST00000315544 TERF2Q15554 542 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 LCORLQ8N3X6 602 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 WDR24Q96S15 920 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 GMLQ99445 158 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 TCP11L1Q9NUJ3 509 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 ZNF215Q9UL58 517 aaPredicted RBP9.09□□□□□ -0.95
CNOT4-201ENST00000315544 PAXBP1Q9Y5B6 917 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 KIF3CO14782 793 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 MMP10P09238 476 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 SNHG28P0DPA3 235 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 ATP2C1P98194 919 aaPredicted RBP9.09□□□□□ -0.95
CNOT4-201ENST00000315544 ZNF568Q3ZCX4 644 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 IFNL3Q8IZI9 196 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 MRPS27Q92552 414 aaKnown RBP9.09□□□□□ -0.95
CNOT4-201ENST00000315544 ZNF532Q9HCE3 1301 aa9.09□□□□□ -0.95
CNOT4-201ENST00000315544 PRC1O43663 620 aa9.09□□□□□ -0.96
CNOT4-201ENST00000315544 GYPCP04921 128 aa9.09□□□□□ -0.96
CNOT4-201ENST00000315544 APPP05067 770 aa9.09□□□□□ -0.96
CNOT4-201ENST00000315544 ITGA6P23229 1130 aa9.09□□□□□ -0.96
CNOT4-201ENST00000315544 ERVK-24P63145 666 aa9.09□□□□□ -0.96
CNOT4-201ENST00000315544 HSP90AA2PQ14568 343 aaPredicted RBP9.09□□□□□ -0.96
CNOT4-201ENST00000315544 CHST3Q7LGC8 479 aa9.09□□□□□ -0.96
CNOT4-201ENST00000315544 LIMA1Q9UHB6 759 aaKnown RBP9.09□□□□□ -0.96
CNOT4-201ENST00000315544 HDAC5Q9UQL6 1122 aa9.09□□□□□ -0.96
CNOT4-201ENST00000315544 A0A1B0GVL5 298 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 SEMA3EO15041 775 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 SERPINB2P05120 415 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 MYBP10242 640 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 RAD9BQ6WBX8 426 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.08□□□□□ -0.96
CNOT4-201ENST00000315544 RIC3Q7Z5B4 369 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 ENAHQ8N8S7 591 aaPredicted RBP9.08□□□□□ -0.96
CNOT4-201ENST00000315544 TMEM87BQ96K49 555 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 ORC3Q9UBD5 711 aaPredicted RBP9.08□□□□□ -0.96
CNOT4-201ENST00000315544 ATRNL1Q5VV63 1379 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 ZNF263O14978 683 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 NEMFO60524 1076 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 SLC5A1P13866 664 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 NPR1P16066 1061 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 KLRK1P26718 216 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 CYP2C19P33261 490 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 KRT40Q6A162 431 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 FAM89AQ96GI7 184 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 KIAA1217Q5T5P2 1943 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 HSP90AA1P07900 732 aaKnown RBP9.08□□□□□ -0.96
CNOT4-201ENST00000315544 KCNG4Q8TDN1 519 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 ST7Q9NRC1 585 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 CFAP45Q9UL16 551 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 PCDHB6Q9Y5E3 794 aa9.08□□□□□ -0.96
CNOT4-201ENST00000315544 DPEP1P16444 411 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 CAPN2P17655 700 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 DNAJC7Q99615 494 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 ZKSCAN1P17029 563 aaPredicted RBP9.07□□□□□ -0.96
CNOT4-201ENST00000315544 ZCWPW2Q504Y3 356 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 DZIP3Q86Y13 1208 aaKnown RBP9.07□□□□□ -0.96
CNOT4-201ENST00000315544 MASTLQ96GX5 879 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 CLIC6Q96NY7 704 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 SYT11Q9BT88 431 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 NYXQ9GZU5 481 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 TNMDQ9H2S6 317 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 BRCA2P51587 3418 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 PRKAB2O43741 272 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 PDE8AO60658 829 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 GTF2E1P29083 439 aaPredicted RBP9.07□□□□□ -0.96
CNOT4-201ENST00000315544 RBM10P98175 930 aaKnown RBP9.07□□□□□ -0.96
CNOT4-201ENST00000315544 HSP90AB3PQ58FF7 597 aa9.07□□□□□ -0.96
CNOT4-201ENST00000315544 RNF20Q5VTR2 975 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms