RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 TTC30BQ8N4P2 665 aa10.39□□□□□ -0.75
BDNF-201ENST00000314915 COG1Q8WTW3 980 aa10.39□□□□□ -0.75
BDNF-201ENST00000314915 IL17RAQ96F46 866 aa10.39□□□□□ -0.75
BDNF-201ENST00000314915 FGD4Q96M96 766 aa10.39□□□□□ -0.75
BDNF-201ENST00000314915 GOLPH3LQ9H4A5 285 aa10.39□□□□□ -0.75
BDNF-201ENST00000314915 ZBTB40Q9NUA8 1239 aa10.39□□□□□ -0.75
BDNF-201ENST00000314915 HOXC10Q9NYD6 342 aa10.39□□□□□ -0.75
BDNF-201ENST00000314915 CDC23Q9UJX2 597 aa10.39□□□□□ -0.75
BDNF-201ENST00000314915 SLC44A4Q53GD3 710 aa10.39□□□□□ -0.75
BDNF-201ENST00000314915 TTLL3Q9Y4R7 772 aa10.39□□□□□ -0.75
BDNF-201ENST00000314915 NUP155O75694 1391 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 PIK3C2GO75747 1445 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 USO1O60763 962 aaKnown RBP10.38□□□□□ -0.75
BDNF-201ENST00000314915 PEX14O75381 377 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 MATR3P43243 847 aaKnown RBP eCLIP10.38□□□□□ -0.75
BDNF-201ENST00000314915 LARP1BQ659C4 914 aaKnown RBP10.38□□□□□ -0.75
BDNF-201ENST00000314915 ARHGAP18Q8N392 663 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 VPS37AQ8NEZ2 397 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 DHX58Q96C10 678 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 ABHD8Q96I13 439 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 MKS1Q9NXB0 559 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 L3MBTL1Q9Y468 752 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 UBN2Q6ZU65 1347 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 EIF2S2P20042 333 aaKnown RBP10.38□□□□□ -0.75
BDNF-201ENST00000314915 HOXD11P31277 338 aaPredicted RBP10.38□□□□□ -0.75
BDNF-201ENST00000314915 MCCD1P59942 119 aaPredicted RBP10.38□□□□□ -0.75
BDNF-201ENST00000314915 KRT85P78386 507 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 POTEEQ6S8J3 1075 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 METTL14Q9HCE5 456 aaKnown RBP10.38□□□□□ -0.75
BDNF-201ENST00000314915 TCHHQ07283 1943 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 CCND1P24385 295 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 ARMCX5Q6P1M9 558 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 WDR75Q8IWA0 830 aaKnown RBP10.38□□□□□ -0.75
BDNF-201ENST00000314915 EHBP1Q8NDI1 1231 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 SMC6Q96SB8 1091 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 SEZ6LQ9BYH1 1024 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 CCDC68Q9H2F9 335 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 DACT1Q9NYF0 836 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 C6orf203Q9P0P8 240 aaPredicted RBP10.38□□□□□ -0.75
BDNF-201ENST00000314915 POLR3AO14802 1390 aaPredicted RBP10.38□□□□□ -0.75
BDNF-201ENST00000314915 RGS12O14924 1447 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
BDNF-201ENST00000314915 A0A1B0GVL5 298 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 CTAGE15A4D2H0 777 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 TMEM110-MUSTN1A8MSY1 372 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 HNRNPCP07910 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
BDNF-201ENST00000314915 CTAGE8P0CG41 777 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 ELF3P78545 371 aaPredicted RBP10.37□□□□□ -0.75
BDNF-201ENST00000314915 SEPT2Q15019 361 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 LACTB2Q53H82 288 aaPredicted RBP10.37□□□□□ -0.75
BDNF-201ENST00000314915 C6orf89Q6UWU4 347 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 Q6ZUG5 572 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 CTAGE6Q86UF2 777 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 CTAGE4Q8IX94 777 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 ZNF473Q8WTR7 871 aaKnown RBP10.37□□□□□ -0.75
BDNF-201ENST00000314915 SNX27Q96L92 541 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 SLC7A5P2Q9GIP4 190 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 CFDP1Q9UEE9 299 aaPredicted RBP10.37□□□□□ -0.75
BDNF-201ENST00000314915 ARHGAP6O43182 974 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 AKR1B10O60218 316 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 MGEA5O60502 916 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 DIAPH2O60879 1101 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 GSTA2P09210 222 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 GGCXP38435 758 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 CCDC12Q8WUD4 166 aaPredicted RBP10.37□□□□□ -0.75
BDNF-201ENST00000314915 MPP4Q96JB8 637 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 MRPL46Q9H2W6 279 aaKnown RBP10.37□□□□□ -0.75
BDNF-201ENST00000314915 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.37□□□□□ -0.75
BDNF-201ENST00000314915 RHBDL2Q9NX52 303 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 CEP131Q9UPN4 1083 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 GHRP10912 638 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 PMS2P54278 862 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 CSE1LP55060 971 aaKnown RBP10.37□□□□□ -0.75
BDNF-201ENST00000314915 BPIFB4P59827 614 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 ZNF554Q86TJ5 538 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 CCAR1Q8IX12 1150 aaKnown RBP10.37□□□□□ -0.75
BDNF-201ENST00000314915 CCDC148Q8NFR7 591 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 SLC4A7Q9Y6M7 1214 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 TRIM43BA6NCK2 446 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 BIRC5O15392 142 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 LDHAP00338 332 aaKnown RBP10.37□□□□□ -0.75
BDNF-201ENST00000314915 NSUN7Q8NE18 718 aaKnown RBP10.37□□□□□ -0.75
BDNF-201ENST00000314915 KIFAP3Q92845 792 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 CLIP3Q96DZ5 547 aa10.37□□□□□ -0.75
BDNF-201ENST00000314915 TTI1O43156 1089 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 NDUFB5O43674 189 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 TBCAO75347 108 aaKnown RBP10.36□□□□□ -0.75
BDNF-201ENST00000314915 ANKRD20A8PQ5CZ79 823 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 KLHDC4Q8TBB5 520 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 L3MBTL3Q96JM7 780 aaPredicted RBP10.36□□□□□ -0.75
BDNF-201ENST00000314915 SUCLA2Q9P2R7 463 aaPredicted RBP10.36□□□□□ -0.75
BDNF-201ENST00000314915 ZMAT5Q9UDW3 170 aaKnown RBP10.36□□□□□ -0.75
BDNF-201ENST00000314915 HTR3EA5X5Y0 456 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 VWA3AA6NCI4 1184 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 ABL1P00519 1130 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 KIF5AQ12840 1032 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 MORC4Q8TE76 937 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 ZSWIM4Q9H7M6 989 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 SSX2IPQ9Y2D8 614 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 PPP2R2CQ9Y2T4 447 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms