RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TFRCP02786 760 aaKnown RBP9.89□□□□□ -0.83
TPM3-203ENST00000312970 TATDN1Q6P1N9 297 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 USP17L2Q6R6M4 530 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 GPRC5AQ8NFJ5 357 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 KIF1BPQ96EK5 621 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 CHMP4BQ9H444 224 aaKnown RBP9.89□□□□□ -0.83
TPM3-203ENST00000312970 ZBTB40Q9NUA8 1239 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 MORF4L1Q9UBU8 362 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 SERPINB13Q9UIV8 391 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 GJD2Q9UKL4 321 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 ZBTB21Q9ULJ3 1066 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 DOCK3Q8IZD9 2030 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 PRUNE2Q8WUY3 3088 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 LOC285556D6RIA3 1793 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 CDK5RAP2Q96SN8 1893 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.88□□□□□ -0.83
TPM3-203ENST00000312970 MAGEB6P1A0A0J9YX57 407 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 APBB1O00213 710 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 RAB11FIP3O75154 756 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 GH2P01242 217 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 IFIT2P09913 472 aaKnown RBP9.88□□□□□ -0.83
TPM3-203ENST00000312970 PDIA4P13667 645 aaKnown RBP9.88□□□□□ -0.83
TPM3-203ENST00000312970 MNX1P50219 401 aaPredicted RBP9.88□□□□□ -0.83
TPM3-203ENST00000312970 HERVK_113P62684 666 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 SHROOM1Q2M3G4 852 aaPredicted RBP9.88□□□□□ -0.83
TPM3-203ENST00000312970 CERKLQ49MI3 558 aaPredicted RBP9.88□□□□□ -0.83
TPM3-203ENST00000312970 SLC9C2Q5TAH2 1124 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.88□□□□□ -0.83
TPM3-203ENST00000312970 ZFP91Q96JP5 570 aaPredicted RBP9.88□□□□□ -0.83
TPM3-203ENST00000312970 DEFB118Q96PH6 123 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 EHD4Q9H223 541 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 CABP5Q9NP86 173 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 PAK6Q9NQU5 681 aaPredicted RBP9.88□□□□□ -0.83
TPM3-203ENST00000312970 EMILIN3Q9NT22 766 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 RBPJLQ9UBG7 517 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 COG6Q9Y2V7 657 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 MAST2Q6P0Q8 1798 aa9.88□□□□□ -0.83
TPM3-203ENST00000312970 SIPA1L1O43166 1804 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 FOCADQ5VW36 1801 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 FARP2O94887 1054 aaPredicted RBP9.87□□□□□ -0.83
TPM3-203ENST00000312970 HMGCRP04035 888 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 POLR3DP05423 398 aaPredicted RBP9.87□□□□□ -0.83
TPM3-203ENST00000312970 PLCD1P51178 756 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 USP14P54578 494 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 ABCB5Q2M3G0 1257 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 Q3C1V9 767 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 CCAR1Q8IX12 1150 aaKnown RBP9.87□□□□□ -0.83
TPM3-203ENST00000312970 SIRT2Q8IXJ6 389 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 GTF3C2Q8WUA4 911 aaPredicted RBP9.87□□□□□ -0.83
TPM3-203ENST00000312970 NUDT12Q9BQG2 462 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 RIOK1Q9BRS2 568 aaKnown RBP9.87□□□□□ -0.83
TPM3-203ENST00000312970 CRNKL1Q9BZJ0 848 aaKnown RBP9.87□□□□□ -0.83
TPM3-203ENST00000312970 CRISPLD2Q9H0B8 497 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 TXNRD2Q9NNW7 524 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 NR2E3Q9Y5X4 410 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 ALPK3Q96L96 1907 aa9.87□□□□□ -0.83
TPM3-203ENST00000312970 RPTORQ8N122 1335 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 MYH1P12882 1939 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 USP17L15C9J2P7 530 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 USP17L13C9JLJ4 530 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 USP17L11C9JVI0 530 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 USP17L18D6R9N7 530 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 USP17L22D6RA61 530 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 USP17L17D6RBQ6 530 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 USP17L19D6RCP7 530 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 USP17L20D6RJB6 530 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 GOLIM4O00461 696 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 PDE6AP16499 860 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 MAPK4P31152 587 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 ERVK-9P63128 1117 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 ERVK-24P63145 666 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 USP17L24Q0WX57 530 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 RAB3GAP1Q15042 981 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 C12orf42Q96LP6 360 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 DNAJC2Q99543 621 aaKnown RBP9.86□□□□□ -0.83
TPM3-203ENST00000312970 KIAA1683Q9H0B3 1180 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.86□□□□□ -0.83
TPM3-203ENST00000312970 BCL11AQ9H165 835 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 HMX1Q9NP08 348 aaPredicted RBP9.86□□□□□ -0.83
TPM3-203ENST00000312970 STAP2Q9UGK3 403 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 RCAN3Q9UKA8 241 aa9.86□□□□□ -0.83
TPM3-203ENST00000312970 ZNF532Q9HCE3 1301 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 PEX10O60683 326 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 XRCC5P13010 732 aaKnown RBP9.85□□□□□ -0.83
TPM3-203ENST00000312970 CYP2B6P20813 491 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 SHMT1P34896 483 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 PDE3AQ14432 1141 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 ZYXQ15942 572 aaKnown RBP9.85□□□□□ -0.83
TPM3-203ENST00000312970 CATSPERGQ6ZRH7 1159 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 TRMT44Q8IYL2 757 aaKnown RBP9.85□□□□□ -0.83
TPM3-203ENST00000312970 FEZ1Q99689 392 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 PAGR1Q9BTK6 254 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 PAG1Q9NWQ8 432 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 MCM9Q9NXL9 1143 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 RABGAP1Q9Y3P9 1069 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 DNAH12Q6ZR08 3092 aa9.85□□□□□ -0.83
TPM3-203ENST00000312970 TCRBV5S4A2TA0A5A2 114 aa9.84□□□□□ -0.83
TPM3-203ENST00000312970 EVI5O60447 810 aa9.84□□□□□ -0.83
TPM3-203ENST00000312970 ZMYND10O75800 440 aa9.84□□□□□ -0.83
TPM3-203ENST00000312970 ATP5JP18859 108 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms