RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 PPP1R1BQ9UD71 204 aaPredicted RBP19.37■□□□□ 0.69
CLCF1-201ENST00000312438 PCDHAC2Q9Y5I4 1007 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 DLEC1Q9Y238 1755 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 KIF28PB7ZC32 967 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 RAD17O75943 681 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 NOVP48745 357 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 CEBPZQ03701 1054 aaKnown RBP19.37■□□□□ 0.69
CLCF1-201ENST00000312438 CFAP100Q494V2 611 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 TPRNQ4KMQ1 711 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 NIM1KQ8IY84 436 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 SRBD1Q8N5C6 995 aaKnown RBP19.37■□□□□ 0.69
CLCF1-201ENST00000312438 TMEM47Q9BQJ4 181 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 EHD4Q9H223 541 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 TAOK2Q9UL54 1235 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 PSMD14O00487 310 aa19.36■□□□□ 0.69
CLCF1-201ENST00000312438 LETM1O95202 739 aaPredicted RBP19.36■□□□□ 0.69
CLCF1-201ENST00000312438 MMP1P03956 469 aa19.36■□□□□ 0.69
CLCF1-201ENST00000312438 PKN1Q16512 942 aa19.36■□□□□ 0.69
CLCF1-201ENST00000312438 GAS2L3Q86XJ1 694 aa19.36■□□□□ 0.69
CLCF1-201ENST00000312438 NAV1Q8NEY1 1877 aa19.36■□□□□ 0.69
CLCF1-201ENST00000312438 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLCF1-201ENST00000312438 HDAC9Q9UKV0 1011 aa19.36■□□□□ 0.69
CLCF1-201ENST00000312438 GRM4Q14833 912 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 CCDC183Q5T5S1 534 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 GMLQ99445 158 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 POLR3EQ9NVU0 708 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 PI4KBQ9UBF8 816 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 FAM198AQ9UFP1 575 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 TOP1P11387 765 aaKnown RBP19.35■□□□□ 0.69
CLCF1-201ENST00000312438 MRE11P49959 708 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 ZFPM1Q8IX07 1006 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 OGFOD1Q8N543 542 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 CEP95Q96GE4 821 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 PGBD1Q96JS3 809 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 PRMT6Q96LA8 375 aaPredicted RBP19.35■□□□□ 0.69
CLCF1-201ENST00000312438 TAOK3Q9H2K8 898 aa19.35■□□□□ 0.69
CLCF1-201ENST00000312438 KIF13BQ9NQT8 1826 aa19.34■□□□□ 0.69
CLCF1-201ENST00000312438 CACNB3P54284 484 aa19.34■□□□□ 0.69
CLCF1-201ENST00000312438 KLHL34Q8N239 644 aa19.34■□□□□ 0.69
CLCF1-201ENST00000312438 FTOQ9C0B1 505 aaKnown RBP eCLIP19.34■□□□□ 0.69
CLCF1-201ENST00000312438 FOXP1Q9H334 677 aaPredicted RBP19.34■□□□□ 0.69
CLCF1-201ENST00000312438 TDRD3Q9H7E2 651 aaKnown RBP19.34■□□□□ 0.69
CLCF1-201ENST00000312438 DDX60LQ5H9U9 1706 aaKnown RBP19.33■□□□□ 0.69
CLCF1-201ENST00000312438 SYCE3A1L190 88 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 ENTPD3O75355 529 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 YEATS4O95619 227 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 NASPP49321 788 aaPredicted RBP19.33■□□□□ 0.69
CLCF1-201ENST00000312438 TCP10Q12799 353 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 LRSAM1Q6UWE0 723 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 FOXP4Q8IVH2 680 aaPredicted RBP19.33■□□□□ 0.69
CLCF1-201ENST00000312438 LINC00301Q8NCQ3 95 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 AGBL3Q8NEM8 1001 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 CCDC17Q96LX7 622 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 LZTS2Q9BRK4 669 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 MTMR4Q9NYA4 1195 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 MAD2L2Q9UI95 211 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 KCNJ14Q9UNX9 436 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 PLIN4Q96Q06 1357 aa19.33■□□□□ 0.69
CLCF1-201ENST00000312438 CNTNAP5Q8WYK1 1306 aa19.33■□□□□ 0.68
CLCF1-201ENST00000312438 SCN9AQ15858 1988 aa19.33■□□□□ 0.68
CLCF1-201ENST00000312438 BTBD18B2RXH4 712 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 SHMT1P34896 483 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 NOSTRINQ8IVI9 506 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 DIS3L2Q8IYB7 885 aaKnown RBP19.32■□□□□ 0.68
CLCF1-201ENST00000312438 KCNG4Q8TDN1 519 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 JDP2Q8WYK2 163 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 CLIC4Q9Y696 253 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 TCHHQ07283 1943 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 PALM3A6NDB9 673 aaPredicted RBP19.32■□□□□ 0.68
CLCF1-201ENST00000312438 AKR1B1P15121 316 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 ANO1Q5XXA6 986 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 ZSCAN29Q8IWY8 852 aaPredicted RBP19.32■□□□□ 0.68
CLCF1-201ENST00000312438 BICD2Q8TD16 824 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 GRPEL1Q9HAV7 217 aa19.32■□□□□ 0.68
CLCF1-201ENST00000312438 IGKV6D-41A0A0C4DH26 115 aa19.31■□□□□ 0.68
CLCF1-201ENST00000312438 DDTLA6NHG4 134 aaPredicted RBP19.31■□□□□ 0.68
CLCF1-201ENST00000312438 PTGER2P43116 358 aa19.31■□□□□ 0.68
CLCF1-201ENST00000312438 STK38Q15208 465 aa19.31■□□□□ 0.68
CLCF1-201ENST00000312438 DLGAP5Q15398 846 aa19.31■□□□□ 0.68
CLCF1-201ENST00000312438 PPP4R3BQ5MIZ7 849 aa19.31■□□□□ 0.68
CLCF1-201ENST00000312438 STAG2Q8N3U4 1231 aa19.31■□□□□ 0.68
CLCF1-201ENST00000312438 PHF20Q9BVI0 1012 aa19.31■□□□□ 0.68
CLCF1-201ENST00000312438 TMOD2Q9NZR1 351 aa19.31■□□□□ 0.68
CLCF1-201ENST00000312438 ZBTB12Q9Y330 459 aaPredicted RBP19.31■□□□□ 0.68
CLCF1-201ENST00000312438 hCG_1642624A0A1W2PR95 340 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 PSDA5PKW4 1024 aaPredicted RBP19.3■□□□□ 0.68
CLCF1-201ENST00000312438 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 SCG2P13521 617 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 ME1P48163 572 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 CXCL9Q07325 125 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 SF3A1Q15459 793 aaKnown RBP19.3■□□□□ 0.68
CLCF1-201ENST00000312438 PFKFB3Q16875 520 aaPredicted RBP19.3■□□□□ 0.68
CLCF1-201ENST00000312438 VPS54Q9P1Q0 977 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 BCS1LQ9Y276 419 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 CDK5RAP2Q96SN8 1893 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 SPTLC2O15270 562 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 LIG1P18858 919 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 ADALQ6DHV7 355 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 SH3BP5LQ7L8J4 393 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms