RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 TMTC3Q6ZXV5 915 aa17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 TMEM139Q8IV31 216 aa17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 TRMT44Q8IYL2 757 aaKnown RBP17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 SPATA20Q8TB22 786 aa17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 ENOX1Q8TC92 643 aaKnown RBP17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 ERO1AQ96HE7 468 aa17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 RBM28Q9NW13 759 aaKnown RBP17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 CGNQ9P2M7 1197 aaKnown RBP17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 CNTNAP5Q8WYK1 1306 aa17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 USP17L12C9JPN9 530 aa17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 USP17L21D6R901 530 aa17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 DDAH1O94760 285 aa17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 MECOMQ03112 1051 aa17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 TRIML1Q8N9V2 468 aa17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 L2HGDHQ9H9P8 463 aa17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 NFE2L3Q9Y4A8 694 aa17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 V9GYY5 206 aaPredicted RBP17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 MYH13Q9UKX3 1938 aa17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 MAST2Q6P0Q8 1798 aa17.39■□□□□ 0.38
SPIRE1-201ENST00000309836 COL24A1Q17RW2 1714 aa17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 KIAA1551Q9HCM1 1747 aa17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 SEMA3EO15041 775 aa17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 ORC4O43929 436 aa17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 SLU7O95391 586 aaKnown RBP17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 PCP11498 1178 aaKnown RBP17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 XBP1P17861 261 aa17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 KANK3Q6NY19 840 aa17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 EPSTI1Q96J88 318 aa17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 NOL10Q9BSC4 688 aaKnown RBP17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 PDS5AQ29RF7 1337 aaKnown RBP17.39■□□□□ 0.37
SPIRE1-201ENST00000309836 NUTM2BA6NNL0 878 aaPredicted RBP17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 NUTM2EB1AL46 878 aaPredicted RBP17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 CALM1P0DP23 149 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 CALM2P0DP24 149 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 CALM3P0DP25 149 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 CYP2D6P10635 497 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 PLCD1P51178 756 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 CCDC93Q567U6 631 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 SH3RF1Q7Z6J0 888 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 IQCA1Q86XH1 822 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 NUTM2AQ8IVF1 878 aaPredicted RBP17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 REXO1L1PQ8IX06 675 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 DHX58Q96C10 678 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 PRDM10Q9NQV6 1147 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 DACH1Q9UI36 760 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 CNTNAP4Q9C0A0 1308 aa17.38■□□□□ 0.37
SPIRE1-201ENST00000309836 NMT2O60551 498 aa17.37■□□□□ 0.37
SPIRE1-201ENST00000309836 SRBD1Q8N5C6 995 aaKnown RBP17.37■□□□□ 0.37
SPIRE1-201ENST00000309836 LRRN4CLQ8ND94 238 aa17.37■□□□□ 0.37
SPIRE1-201ENST00000309836 DCP1AQ9NPI6 582 aaPredicted RBP17.37■□□□□ 0.37
SPIRE1-201ENST00000309836 TFCP2L1Q9NZI6 479 aa17.37■□□□□ 0.37
SPIRE1-201ENST00000309836 ZNF174Q15697 407 aa17.37■□□□□ 0.37
SPIRE1-201ENST00000309836 TRIM65Q6PJ69 517 aa17.37■□□□□ 0.37
SPIRE1-201ENST00000309836 SYMPKQ92797 1274 aaKnown RBP17.37■□□□□ 0.37
SPIRE1-201ENST00000309836 SAMSN1Q9NSI8 373 aaKnown RBP17.37■□□□□ 0.37
SPIRE1-201ENST00000309836 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
SPIRE1-201ENST00000309836 CCP110O43303 1012 aa17.36■□□□□ 0.37
SPIRE1-201ENST00000309836 SLFN14P0C7P3 912 aa17.36■□□□□ 0.37
SPIRE1-201ENST00000309836 RPS8P62241 208 aaKnown RBP17.36■□□□□ 0.37
SPIRE1-201ENST00000309836 ELF2Q15723 593 aa17.36■□□□□ 0.37
SPIRE1-201ENST00000309836 FAM47AQ5JRC9 791 aa17.36■□□□□ 0.37
SPIRE1-201ENST00000309836 FCHSD1Q86WN1 690 aa17.36■□□□□ 0.37
SPIRE1-201ENST00000309836 PAGE5Q96GU1 130 aa17.36■□□□□ 0.37
SPIRE1-201ENST00000309836 ADAMTS3O15072 1205 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 RGL2O15211 777 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 TUBB4AP04350 444 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 CD44P16070 742 aaKnown RBP17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 ERCC5P28715 1186 aaPredicted RBP17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 GTF2E1P29083 439 aaPredicted RBP17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 CASP1P29466 404 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 PRDX5P30044 214 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 HIBADHP31937 336 aaKnown RBP17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 ETF1P62495 437 aaKnown RBP17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 TTC38Q5R3I4 469 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 PTF1AQ7RTS3 328 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 ZNF397Q8NF99 534 aaPredicted RBP17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 FERMT2Q96AC1 680 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 FEZ1Q99689 392 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 CRNKL1Q9BZJ0 848 aaKnown RBP17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 FANCGO15287 622 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 BMP15O95972 392 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 CDK11BP21127 795 aaKnown RBP17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 AFMP43652 599 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 KMT5BQ4FZB7 885 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 TC2NQ8N9U0 490 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 BRMS1Q9HCU9 246 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 PHLPP2Q6ZVD8 1323 aa17.35■□□□□ 0.37
SPIRE1-201ENST00000309836 ATP2C1P98194 919 aaPredicted RBP17.34■□□□□ 0.37
SPIRE1-201ENST00000309836 CUL4BQ13620 913 aa17.34■□□□□ 0.37
SPIRE1-201ENST00000309836 SBK1Q52WX2 424 aa17.34■□□□□ 0.37
SPIRE1-201ENST00000309836 SPECC1LQ69YQ0 1117 aa17.34■□□□□ 0.37
SPIRE1-201ENST00000309836 HOMER1Q86YM7 354 aa17.34■□□□□ 0.37
SPIRE1-201ENST00000309836 CCDC24Q8N4L8 307 aa17.34■□□□□ 0.37
SPIRE1-201ENST00000309836 ATP8A2Q9NTI2 1148 aa17.34■□□□□ 0.37
SPIRE1-201ENST00000309836 IRS2Q9Y4H2 1338 aa17.34■□□□□ 0.37
SPIRE1-201ENST00000309836 ARHGAP6O43182 974 aa17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 VEGFAP15692 232 aaPredicted RBP17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 DPYDQ12882 1025 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms