RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 XBP1P17861 261 aa24.57■■□□□ 1.52
ATG4D-201ENST00000309469 KIF5BP33176 963 aa24.57■■□□□ 1.52
ATG4D-201ENST00000309469 PICALMQ13492 652 aa24.57■■□□□ 1.52
ATG4D-201ENST00000309469 SLC39A14Q15043 492 aa24.57■■□□□ 1.52
ATG4D-201ENST00000309469 CCDC73Q6ZRK6 1079 aa24.57■■□□□ 1.52
ATG4D-201ENST00000309469 MAP3K14Q99558 947 aa24.57■■□□□ 1.52
ATG4D-201ENST00000309469 WDHD1O75717 1129 aaPredicted RBP24.57■■□□□ 1.52
ATG4D-201ENST00000309469 PNMA1Q8ND90 353 aa24.57■■□□□ 1.52
ATG4D-201ENST00000309469 C10orf71Q711Q0 1435 aa24.56■■□□□ 1.52
ATG4D-201ENST00000309469 CCDC173Q0VFZ6 552 aa24.56■■□□□ 1.52
ATG4D-201ENST00000309469 DACT2Q5SW24 774 aa24.56■■□□□ 1.52
ATG4D-201ENST00000309469 APOBEC3HQ6NTF7 200 aaKnown RBP24.56■■□□□ 1.52
ATG4D-201ENST00000309469 RBM43Q6ZSC3 357 aaKnown RBP24.56■■□□□ 1.52
ATG4D-201ENST00000309469 FSIP1Q8NA03 581 aa24.56■■□□□ 1.52
ATG4D-201ENST00000309469 SUPT20HQ8NEM7 779 aa24.56■■□□□ 1.52
ATG4D-201ENST00000309469 MRIQ9BWK5 157 aa24.56■■□□□ 1.52
ATG4D-201ENST00000309469 SNED1Q8TER0 1413 aa24.56■■□□□ 1.52
ATG4D-201ENST00000309469 CNTNAP5Q8WYK1 1306 aa24.56■■□□□ 1.52
ATG4D-201ENST00000309469 hCG_1642624A0A1W2PR95 340 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 SNW1Q13573 536 aaKnown RBP24.55■■□□□ 1.52
ATG4D-201ENST00000309469 CDC42EP5Q6NZY7 148 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 ENGASEQ8NFI3 743 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 NEDD1Q8NHV4 660 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 PPP1R9BQ96SB3 815 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 CCDC192P0DO97 292 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 CRKP46108 304 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 FAM160A1Q05DH4 1040 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 KIAA2012Q0VF49 1180 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 AOC3Q16853 763 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 SLC16A10Q8TF71 515 aa24.55■■□□□ 1.52
ATG4D-201ENST00000309469 MRPS27Q92552 414 aaKnown RBP24.55■■□□□ 1.52
ATG4D-201ENST00000309469 DDX4Q9NQI0 724 aaKnown RBP24.55■■□□□ 1.52
ATG4D-201ENST00000309469 C21orf2O43822 256 aa24.54■■□□□ 1.52
ATG4D-201ENST00000309469 SHISA4Q96DD7 197 aa24.54■■□□□ 1.52
ATG4D-201ENST00000309469 VPS54Q9P1Q0 977 aa24.54■■□□□ 1.52
ATG4D-201ENST00000309469 PTPAQ15257 358 aa24.53■■□□□ 1.52
ATG4D-201ENST00000309469 CKAP2LQ8IYA6 745 aa24.53■■□□□ 1.52
ATG4D-201ENST00000309469 ZDHHC15Q96MV8 337 aa24.53■■□□□ 1.52
ATG4D-201ENST00000309469 TMEM47Q9BQJ4 181 aa24.53■■□□□ 1.52
ATG4D-201ENST00000309469 PHF20Q9BVI0 1012 aa24.53■■□□□ 1.52
ATG4D-201ENST00000309469 STX8Q9UNK0 236 aa24.53■■□□□ 1.52
ATG4D-201ENST00000309469 PPP6R2O75170 966 aa24.53■■□□□ 1.52
ATG4D-201ENST00000309469 HDLBPQ00341 1268 aaKnown RBP24.53■■□□□ 1.52
ATG4D-201ENST00000309469 GRM4Q14833 912 aa24.53■■□□□ 1.52
ATG4D-201ENST00000309469 KIAA0825Q8IV33 1275 aa24.53■■□□□ 1.52
ATG4D-201ENST00000309469 GABPAQ06546 454 aa24.52■■□□□ 1.52
ATG4D-201ENST00000309469 NR5A1Q13285 461 aa24.52■■□□□ 1.52
ATG4D-201ENST00000309469 UVSSAQ2YD98 709 aa24.52■■□□□ 1.52
ATG4D-201ENST00000309469 AXDND1Q5T1B0 1012 aaPredicted RBP24.52■■□□□ 1.52
ATG4D-201ENST00000309469 TTLL6Q8N841 843 aa24.52■■□□□ 1.52
ATG4D-201ENST00000309469 OXER1Q8TDS5 423 aa24.52■■□□□ 1.52
ATG4D-201ENST00000309469 FOCADQ5VW36 1801 aa24.52■■□□□ 1.52
ATG4D-201ENST00000309469 CTAGE5O15320 804 aa24.51■■□□□ 1.51
ATG4D-201ENST00000309469 GRIPAP1Q4V328 841 aa24.51■■□□□ 1.51
ATG4D-201ENST00000309469 JMYQ8N9B5 988 aa24.51■■□□□ 1.51
ATG4D-201ENST00000309469 OSBPL5Q9H0X9 879 aaPredicted RBP24.51■■□□□ 1.51
ATG4D-201ENST00000309469 KINO60870 393 aaKnown RBP24.51■■□□□ 1.51
ATG4D-201ENST00000309469 MARCKSP29966 332 aaPredicted RBP24.51■■□□□ 1.51
ATG4D-201ENST00000309469 GNAQP50148 359 aa24.51■■□□□ 1.51
ATG4D-201ENST00000309469 TOB1P50616 345 aaPredicted RBP24.51■■□□□ 1.51
ATG4D-201ENST00000309469 TYRO3Q06418 890 aa24.51■■□□□ 1.51
ATG4D-201ENST00000309469 RILPL1Q5EBL4 403 aa24.51■■□□□ 1.51
ATG4D-201ENST00000309469 FMR1NBQ8N0W7 255 aaPredicted RBP24.51■■□□□ 1.51
ATG4D-201ENST00000309469 MAD2L2Q9UI95 211 aa24.51■■□□□ 1.51
ATG4D-201ENST00000309469 MYH1P12882 1939 aa24.51■■□□□ 1.51
ATG4D-201ENST00000309469 A0A1B0GVL5 298 aa24.5■■□□□ 1.51
ATG4D-201ENST00000309469 KRT2P35908 639 aa24.5■■□□□ 1.51
ATG4D-201ENST00000309469 FAM43AQ8N2R8 423 aa24.5■■□□□ 1.51
ATG4D-201ENST00000309469 STAG2Q8N3U4 1231 aa24.5■■□□□ 1.51
ATG4D-201ENST00000309469 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.5■■□□□ 1.51
ATG4D-201ENST00000309469 PPIP5K2O43314 1243 aa24.49■■□□□ 1.51
ATG4D-201ENST00000309469 SCG2P13521 617 aa24.49■■□□□ 1.51
ATG4D-201ENST00000309469 CMA1P23946 247 aa24.49■■□□□ 1.51
ATG4D-201ENST00000309469 PFKFB3Q16875 520 aaPredicted RBP24.49■■□□□ 1.51
ATG4D-201ENST00000309469 RTN4Q9NQC3 1192 aaKnown RBP24.49■■□□□ 1.51
ATG4D-201ENST00000309469 NOVP48745 357 aa24.49■■□□□ 1.51
ATG4D-201ENST00000309469 NDUFA8P51970 172 aa24.49■■□□□ 1.51
ATG4D-201ENST00000309469 TRIM44Q96DX7 344 aaPredicted RBP24.49■■□□□ 1.51
ATG4D-201ENST00000309469 KCNA3P22001 575 aa24.48■■□□□ 1.51
ATG4D-201ENST00000309469 CCDC93Q567U6 631 aa24.48■■□□□ 1.51
ATG4D-201ENST00000309469 RTKN2Q8IZC4 609 aa24.48■■□□□ 1.51
ATG4D-201ENST00000309469 CEP95Q96GE4 821 aa24.48■■□□□ 1.51
ATG4D-201ENST00000309469 CABP5Q9NP86 173 aa24.48■■□□□ 1.51
ATG4D-201ENST00000309469 SWAP70Q9UH65 585 aa24.48■■□□□ 1.51
ATG4D-201ENST00000309469 SERPINB13Q9UIV8 391 aa24.48■■□□□ 1.51
ATG4D-201ENST00000309469 MRVI1Q9Y6F6 885 aa24.48■■□□□ 1.51
ATG4D-201ENST00000309469 PALM3A6NDB9 673 aaPredicted RBP24.47■■□□□ 1.51
ATG4D-201ENST00000309469 TOP1P11387 765 aaKnown RBP24.47■■□□□ 1.51
ATG4D-201ENST00000309469 DPEP1P16444 411 aa24.47■■□□□ 1.51
ATG4D-201ENST00000309469 NFIAQ12857 509 aa24.47■■□□□ 1.51
ATG4D-201ENST00000309469 SASS6Q6UVJ0 657 aa24.47■■□□□ 1.51
ATG4D-201ENST00000309469 BRMS1Q9HCU9 246 aa24.47■■□□□ 1.51
ATG4D-201ENST00000309469 SERPINA10Q9UK55 444 aa24.47■■□□□ 1.51
ATG4D-201ENST00000309469 ADAMTSL1Q8N6G6 1762 aa24.47■■□□□ 1.51
ATG4D-201ENST00000309469 RBM5P52756 815 aaKnown RBP eCLIP24.47■■□□□ 1.51
ATG4D-201ENST00000309469 PIBF1Q8WXW3 757 aa24.47■■□□□ 1.51
ATG4D-201ENST00000309469 PDLIM2Q96JY6 352 aa24.47■■□□□ 1.51
ATG4D-201ENST00000309469 PCDHAC2Q9Y5I4 1007 aa24.47■■□□□ 1.51
ATG4D-201ENST00000309469 PLIN4Q96Q06 1357 aa24.46■■□□□ 1.51
ATG4D-201ENST00000309469 HLA-DOAP06340 250 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms