RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 RNF40O75150 1001 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 PDE6AP16499 860 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 AMPD2Q01433 879 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 CNGA4Q8IV77 575 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 ZNF579Q8NAF0 562 aaKnown RBP16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 DDX17Q92841 729 aaKnown RBP16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 SHISA4Q96DD7 197 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 CHP1Q99653 195 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 FOXP1Q9H334 677 aaPredicted RBP16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 ABHD10Q9NUJ1 306 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 GUCA1BQ9UMX6 200 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 hCG_1642624A0A1W2PR95 340 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 RPS6KA5O75582 802 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 ZMYND10O75800 440 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 WHAMMP3Q1A5X7 153 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 KANK3Q6NY19 840 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 NUP133Q8WUM0 1156 aa16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 STRBPQ96SI9 672 aaKnown RBP16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 NUP88Q99567 741 aaPredicted RBP16.36■□□□□ 0.21
LRRFIP1-203ENST00000308482 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 SRGAP2O75044 1071 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 SYF2O95926 243 aaKnown RBP16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 LIFRP42702 1097 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 PIP4K2BP78356 416 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 IFIT5Q13325 482 aaKnown RBP16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 KRT31Q15323 416 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 RTN1Q16799 776 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 FILIP1LQ4L180 1135 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 MSL3Q8N5Y2 521 aaKnown RBP16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 SYMPKQ92797 1274 aaKnown RBP16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 AIDAQ96BJ3 306 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.35■□□□□ 0.219e-8■■■■□ 20.5
LRRFIP1-203ENST00000308482 AKAP11Q9UKA4 1901 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 N4BP3O15049 544 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 BLZF1Q9H2G9 400 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 TAB2Q9NYJ8 693 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 RIC1Q4ADV7 1423 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 NUP188Q5SRE5 1749 aa16.35■□□□□ 0.21
LRRFIP1-203ENST00000308482 PHKA1P46020 1223 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 LDHAL6AQ6ZMR3 332 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 GSPT2Q8IYD1 628 aaKnown RBP16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 WASF1Q92558 559 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 HINFPQ9BQA5 517 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 REXO2Q9Y3B8 237 aaKnown RBP16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 MAGEA9P43362 315 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 NOM1Q5C9Z4 860 aaKnown RBP16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 TMTC1Q8IUR5 882 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 IFNL3Q8IZI9 196 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 CTAGE1Q96RT6 745 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 GBP3Q9H0R5 595 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 NAPBQ9H115 298 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 PKD1L3Q7Z443 1732 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 MST1RQ04912 1400 aa16.34■□□□□ 0.21
LRRFIP1-203ENST00000308482 PRKAB2O43741 272 aa16.33■□□□□ 0.21
LRRFIP1-203ENST00000308482 TUBB2AQ13885 445 aa16.33■□□□□ 0.21
LRRFIP1-203ENST00000308482 UBE3CQ15386 1083 aa16.33■□□□□ 0.21
LRRFIP1-203ENST00000308482 CRACR2BQ8N4Y2 399 aaPredicted RBP16.33■□□□□ 0.21
LRRFIP1-203ENST00000308482 MMS19Q96T76 1030 aa16.33■□□□□ 0.21
LRRFIP1-203ENST00000308482 TUBB2BQ9BVA1 445 aa16.33■□□□□ 0.21
LRRFIP1-203ENST00000308482 ARMT1Q9H993 441 aa16.33■□□□□ 0.21
LRRFIP1-203ENST00000308482 RIPOR2Q9Y4F9 1068 aa16.33■□□□□ 0.21
LRRFIP1-203ENST00000308482 TCRBV5S4A2TA0A5A2 114 aa16.33■□□□□ 0.2
LRRFIP1-203ENST00000308482 FECHP22830 423 aa16.33■□□□□ 0.2
LRRFIP1-203ENST00000308482 KRT9P35527 623 aa16.33■□□□□ 0.2
LRRFIP1-203ENST00000308482 SH3RF1Q7Z6J0 888 aa16.33■□□□□ 0.2
LRRFIP1-203ENST00000308482 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
LRRFIP1-203ENST00000308482 VPS54Q9P1Q0 977 aa16.33■□□□□ 0.2
LRRFIP1-203ENST00000308482 MAPK8IP1Q9UQF2 711 aa16.33■□□□□ 0.2
LRRFIP1-203ENST00000308482 PRDM1O75626 825 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 MBD4O95243 580 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 TTC31Q49AM3 519 aaPredicted RBP16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 WDR93Q6P2C0 686 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 GOLGA6L1Q8N7Z2 621 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 CAPZA3Q96KX2 299 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 GREM2Q9H772 168 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 MED4Q9NPJ6 270 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 PRPF6O94906 941 aaKnown RBP16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 DEXIO95424 95 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 CYP26C1Q6V0L0 522 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 CCDC148Q8NFR7 591 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 AATFQ9NY61 560 aaKnown RBP eCLIP16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 MKRN1Q9UHC7 482 aaKnown RBP16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 ATP1A1P05023 1023 aaKnown RBP16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 WTAPQ15007 396 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 AKNAD1Q5T1N1 836 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 HELBQ8NG08 1087 aaPredicted RBP16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 TTLL11Q8NHH1 800 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 AFAP1L1Q8TED9 768 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 CCDC51Q96ER9 411 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 CEP131Q9UPN4 1083 aa16.32■□□□□ 0.2
LRRFIP1-203ENST00000308482 ATRNO75882 1429 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 TRIM75PA6NK02 468 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 SNAP23O00161 211 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 ITGA6P23229 1130 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 USP14P54578 494 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 CORO7P57737 925 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms