RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 DGKHQ86XP1 1220 aa23.17■■□□□ 1.3
SSH3-202ENST00000308298 COL23A1Q86Y22 540 aaPredicted RBP23.17■■□□□ 1.3
SSH3-202ENST00000308298 MAPKAPK5Q8IW41 473 aa23.17■■□□□ 1.3
SSH3-202ENST00000308298 SLF2Q8IX21 1173 aa23.17■■□□□ 1.3
SSH3-202ENST00000308298 SRBD1Q8N5C6 995 aaKnown RBP23.17■■□□□ 1.3
SSH3-202ENST00000308298 ATP6V0A2Q9Y487 856 aa23.17■■□□□ 1.3
SSH3-202ENST00000308298 MYH1P12882 1939 aa23.17■■□□□ 1.3
SSH3-202ENST00000308298 FAM205AQ6ZU69 1335 aa23.17■■□□□ 1.3
SSH3-202ENST00000308298 A0A087WWV3 80 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 PLCG2P16885 1265 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 ZNF75DP51815 510 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 CCDC178Q5BJE1 867 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 FAM163AQ96GL9 167 aaPredicted RBP23.16■■□□□ 1.3
SSH3-202ENST00000308298 TRIM5Q9C035 493 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 KAT14Q9H8E8 782 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 CEP131Q9UPN4 1083 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 KIF5BP33176 963 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 ANKS1AQ92625 1134 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 ZNF830Q96NB3 372 aaPredicted RBP23.16■■□□□ 1.3
SSH3-202ENST00000308298 CABP5Q9NP86 173 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 IL17RBQ9NRM6 502 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 PCDHB6Q9Y5E3 794 aa23.16■■□□□ 1.3
SSH3-202ENST00000308298 COL11A2P13942 1736 aaPredicted RBP23.16■■□□□ 1.3
SSH3-202ENST00000308298 BECN2A8MW95 431 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 KIAA2012Q0VF49 1180 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.15■■□□□ 1.3
SSH3-202ENST00000308298 DHX40Q8IX18 779 aaKnown RBP23.15■■□□□ 1.3
SSH3-202ENST00000308298 TEX11Q8IYF3 940 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 SPC24Q8NBT2 197 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 TTC12Q9H892 705 aaPredicted RBP23.15■■□□□ 1.3
SSH3-202ENST00000308298 GAKO14976 1311 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 APBA3O96018 575 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 SRGNP10124 158 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 PTPREP23469 700 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 SARM1Q6SZW1 724 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 BRMS1Q9HCU9 246 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 TCP11L1Q9NUJ3 509 aa23.15■■□□□ 1.3
SSH3-202ENST00000308298 SAP30BPQ9UHR5 308 aaKnown RBP23.15■■□□□ 1.3
SSH3-202ENST00000308298 FBXO2Q9UK22 296 aaPredicted RBP23.15■■□□□ 1.3
SSH3-202ENST00000308298 OFD1O75665 1012 aa23.14■■□□□ 1.29
SSH3-202ENST00000308298 TSPY3P0CV98 308 aa23.14■■□□□ 1.29
SSH3-202ENST00000308298 TSPY8P0CW00 308 aa23.14■■□□□ 1.29
SSH3-202ENST00000308298 NPR1P16066 1061 aa23.14■■□□□ 1.29
SSH3-202ENST00000308298 PLCD1P51178 756 aa23.14■■□□□ 1.29
SSH3-202ENST00000308298 ZNF444Q8N0Y2 327 aaPredicted RBP23.14■■□□□ 1.29
SSH3-202ENST00000308298 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.13■■□□□ 1.29
SSH3-202ENST00000308298 PNMA1Q8ND90 353 aa23.13■■□□□ 1.29
SSH3-202ENST00000308298 FLAD1Q8NFF5 587 aa23.13■■□□□ 1.29
SSH3-202ENST00000308298 COA1Q9GZY4 146 aa23.13■■□□□ 1.29
SSH3-202ENST00000308298 ZNF287Q9HBT7 754 aa23.13■■□□□ 1.29
SSH3-202ENST00000308298 KCNH3Q9ULD8 1083 aa23.13■■□□□ 1.29
SSH3-202ENST00000308298 QSER1Q2KHR3 1735 aa23.13■■□□□ 1.29
SSH3-202ENST00000308298 BAZ2BQ9UIF8 2168 aaKnown RBP23.13■■□□□ 1.29
SSH3-202ENST00000308298 NLRP12P59046 1061 aa23.13■■□□□ 1.29
SSH3-202ENST00000308298 DPCR1Q3MIW9 517 aa23.13■■□□□ 1.29
SSH3-202ENST00000308298 BPIFA3Q9BQP9 254 aa23.13■■□□□ 1.29
SSH3-202ENST00000308298 MORC2Q9Y6X9 1032 aaPredicted RBP23.13■■□□□ 1.29
SSH3-202ENST00000308298 SCG2P13521 617 aa23.12■■□□□ 1.29
SSH3-202ENST00000308298 FLT1P17948 1338 aa23.12■■□□□ 1.29
SSH3-202ENST00000308298 RHBDL3P58872 404 aa23.12■■□□□ 1.29
SSH3-202ENST00000308298 AOPEPQ8N6M6 819 aa23.12■■□□□ 1.29
SSH3-202ENST00000308298 SLC44A5Q8NCS7 719 aa23.12■■□□□ 1.29
SSH3-202ENST00000308298 FBXW7Q969H0 707 aa23.12■■□□□ 1.29
SSH3-202ENST00000308298 RIMBP2O15034 1052 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 RASA1P20936 1047 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 GTF2IP78347 998 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 NPY5RQ15761 445 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 PFKFB3Q16875 520 aaPredicted RBP23.11■■□□□ 1.29
SSH3-202ENST00000308298 ZNF579Q8NAF0 562 aaKnown RBP23.11■■□□□ 1.29
SSH3-202ENST00000308298 FAM13BQ9NYF5 915 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 TUBE1Q9UJT0 475 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 SRPRBQ9Y5M8 271 aaKnown RBP23.11■■□□□ 1.29
SSH3-202ENST00000308298 USP17L3A6NCW0 530 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 USP17L4A6NCW7 530 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 FAM205CA6NFA0 338 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 TRIM75PA6NK02 468 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 ATP2B1P20020 1258 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 CDC25BP30305 580 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 PDE6BP35913 854 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 C16orf86Q6ZW13 317 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 USP17L1Q7RTZ2 530 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 TNFRSF25Q93038 417 aa23.11■■□□□ 1.29
SSH3-202ENST00000308298 SNED1Q8TER0 1413 aa23.1■■□□□ 1.29
SSH3-202ENST00000308298 ALDH1B1P30837 517 aa23.1■■□□□ 1.29
SSH3-202ENST00000308298 GRM4Q14833 912 aa23.1■■□□□ 1.29
SSH3-202ENST00000308298 EARS2Q5JPH6 523 aaKnown RBP23.1■■□□□ 1.29
SSH3-202ENST00000308298 KRBA2Q6ZNG9 492 aa23.1■■□□□ 1.29
SSH3-202ENST00000308298 NAP1L5Q96NT1 182 aaPredicted RBP23.1■■□□□ 1.29
SSH3-202ENST00000308298 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.1■■□□□ 1.29
SSH3-202ENST00000308298 PARP3Q9Y6F1 533 aa23.1■■□□□ 1.29
SSH3-202ENST00000308298 BIN1O00499 593 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 GRIN1Q05586 938 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 DRC7Q8IY82 874 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 PIBF1Q8WXW3 757 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 SUGT1Q9Y2Z0 365 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 MMP10P09238 476 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 CDK8P49336 464 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 GNAQP50148 359 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 LONRF3Q496Y0 759 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 SPECC1Q5M775 1068 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms