RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 FOSP01100 380 aaPredicted RBP9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 GJB2P29033 226 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 ODR4Q5SWX8 454 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 CEP128Q6ZU80 1094 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 GTF3C2Q8WUA4 911 aaPredicted RBP9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 NAP1L3Q99457 506 aaPredicted RBP9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 GIPC1O14908 333 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 AKR1B10O60218 316 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 CYLC1P35663 651 aaPredicted RBP9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 ASPRV1Q53RT3 343 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 CIAPIN1Q6FI81 312 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 TBC1D31Q96DN5 1066 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 TM6SF1Q9BZW5 370 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 FRMD4BQ9Y2L6 1034 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 NALCNQ8IZF0 1738 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 EEF2P13639 858 aaKnown RBP9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 C2orf69Q8N8R5 385 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 NT5C3AQ9H0P0 336 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 PFDN4Q9NQP4 134 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 TRIM28Q13263 835 aaKnown RBP9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 GIMAP6Q6P9H5 292 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 MIGA1Q8NAN2 632 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 TBC1D32Q96NH3 1257 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 PI4KBQ9UBF8 816 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 SERPINA10Q9UK55 444 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 CDHR2Q9BYE9 1310 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 FSIP1Q8NA03 581 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 BRF1Q92994 677 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 TMOD1P28289 359 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 CFAP157Q5JU67 520 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 TSPYL6Q8N831 410 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 BRIP1Q9BX63 1249 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 NACA2Q9H009 215 aa9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 SPATA31A1Q5TZJ5 1347 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 CAMK4Q16566 473 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 ERFEQ4G0M1 354 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 SLFN12Q8IYM2 578 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 FAM212AQ96EL1 285 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 ZNF408Q9H9D4 720 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 PHLPP2Q6ZVD8 1323 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 ASNSP08243 561 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 DPH6Q7L8W6 267 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 PLEKHM2Q8IWE5 1019 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 PARP4Q9UKK3 1724 aaKnown RBP9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 AKAP12Q02952 1782 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 AFAP1L2Q8N4X5 818 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 PA2G4Q9UQ80 394 aaKnown RBP9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 REXO1Q8N1G1 1221 aaKnown RBP9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 IQCDQ96DY2 449 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 TBC1D2Q9BYX2 928 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 KANSL2Q9H9L4 492 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 CHMLP26374 656 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 AKNAD1Q5T1N1 836 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 RGPD8O14715 1765 aaPredicted RBP9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 PLCB3Q01970 1234 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 ERCC6LQ2NKX8 1250 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 NSMCE1Q8WV22 266 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 NBPF3Q9H094 633 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 ADAMTS13Q76LX8 1427 aa9.3□□□□□ -0.92
PCDHB1-201ENST00000306549 STK10O94804 968 aaKnown RBP9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 MED23Q9ULK4 1368 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 TIMM10P62072 90 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 CHRNDQ07001 517 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 RSPH3Q86UC2 560 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 FOXP4Q8IVH2 680 aaPredicted RBP9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 ANKS4BQ8N8V4 417 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 BEND3Q5T5X7 828 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 GOLGA5Q8TBA6 731 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 PLEKHF1Q96S99 279 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 TRIM6Q9C030 488 aaPredicted RBP9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 GRPEL1Q9HAV7 217 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 ZNF532Q9HCE3 1301 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 ZSCAN22P10073 491 aaPredicted RBP9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 JARID2Q92833 1246 aaPredicted RBP9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 SUCLG2Q96I99 432 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 CSRNP2Q9H175 543 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 SPATA31A5Q5VU36 1347 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 SPATA31A7Q8IWB4 1347 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 OPA1O60313 960 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 DDAH1O94760 285 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 SATB1Q01826 763 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 CCDC50Q8IVM0 306 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 STX10O60499 249 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 USP17L8P0C7I0 530 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 P4HA1P13674 534 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 ADCY7P51828 1080 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 MAP7Q14244 749 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 GEN1Q17RS7 908 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 MSL1Q68DK7 614 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 CNNM4Q6P4Q7 775 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 GIMAP8Q8ND71 665 aaPredicted RBP9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 CPLX3Q8WVH0 158 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 RNF34Q969K3 372 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 RAB3IPQ96QF0 476 aaPredicted RBP9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 STRN3Q13033 797 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 ABCB5Q2M3G0 1257 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 TTLL7Q6ZT98 887 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 FBXO41Q8TF61 875 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 FAM184BQ9ULE4 1060 aa9.29□□□□□ -0.92
PCDHB1-201ENST00000306549 CCDC114Q96M63 670 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms