RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 GORABQ5T7V8 394 aa11.65□□□□□ -0.54
TEFM-201ENST00000306049 GPR142Q7Z601 462 aa11.65□□□□□ -0.54
TEFM-201ENST00000306049 PLEKHH3Q7Z736 793 aa11.65□□□□□ -0.54
TEFM-201ENST00000306049 CCAR1Q8IX12 1150 aaKnown RBP11.65□□□□□ -0.54
TEFM-201ENST00000306049 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
TEFM-201ENST00000306049 PPM1EQ8WY54 764 aa11.65□□□□□ -0.54
TEFM-201ENST00000306049 ASB2Q96Q27 587 aa11.65□□□□□ -0.54
TEFM-201ENST00000306049 UHRF1Q96T88 793 aaPredicted RBP11.65□□□□□ -0.54
TEFM-201ENST00000306049 APBA2Q99767 749 aa11.65□□□□□ -0.54
TEFM-201ENST00000306049 PAGR1Q9BTK6 254 aa11.65□□□□□ -0.54
TEFM-201ENST00000306049 DHX36Q9H2U1 1008 aaKnown RBP11.65□□□□□ -0.54
TEFM-201ENST00000306049 DNAJC18Q9H819 358 aa11.65□□□□□ -0.54
TEFM-201ENST00000306049 PRDM5Q9NQX1 630 aaPredicted RBP11.65□□□□□ -0.54
TEFM-201ENST00000306049 ATP11BQ9Y2G3 1177 aa11.65□□□□□ -0.54
TEFM-201ENST00000306049 MYH8P13535 1937 aa11.64□□□□□ -0.55
TEFM-201ENST00000306049 GDF11O95390 407 aa11.64□□□□□ -0.55
TEFM-201ENST00000306049 GRIN2CQ14957 1233 aa11.64□□□□□ -0.55
TEFM-201ENST00000306049 MAPKAPK5Q8IW41 473 aa11.64□□□□□ -0.55
TEFM-201ENST00000306049 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
TEFM-201ENST00000306049 BADQ92934 168 aa11.64□□□□□ -0.55
TEFM-201ENST00000306049 NOL10Q9BSC4 688 aaKnown RBP11.64□□□□□ -0.55
TEFM-201ENST00000306049 C1QTNF1Q9BXJ1 281 aa11.64□□□□□ -0.55
TEFM-201ENST00000306049 API5Q9BZZ5 524 aaKnown RBP11.64□□□□□ -0.55
TEFM-201ENST00000306049 LRP2BPQ9P2M1 347 aa11.64□□□□□ -0.55
TEFM-201ENST00000306049 ZBTB21Q9ULJ3 1066 aa11.64□□□□□ -0.55
TEFM-201ENST00000306049 MYO9BQ13459 2157 aa11.63□□□□□ -0.55
TEFM-201ENST00000306049 MCAMP43121 646 aa11.63□□□□□ -0.55
TEFM-201ENST00000306049 MAP2K5Q13163 448 aa11.63□□□□□ -0.55
TEFM-201ENST00000306049 POTEEQ6S8J3 1075 aa11.63□□□□□ -0.55
TEFM-201ENST00000306049 METTL16Q86W50 562 aaKnown RBP11.63□□□□□ -0.55
TEFM-201ENST00000306049 FOXP4Q8IVH2 680 aaPredicted RBP11.63□□□□□ -0.55
TEFM-201ENST00000306049 CRACR2BQ8N4Y2 399 aaPredicted RBP11.63□□□□□ -0.55
TEFM-201ENST00000306049 TGFBRAP1Q8WUH2 860 aa11.63□□□□□ -0.55
TEFM-201ENST00000306049 TRIM34Q9BYJ4 488 aa11.63□□□□□ -0.55
TEFM-201ENST00000306049 CWC22Q9HCG8 908 aaKnown RBP11.63□□□□□ -0.55
TEFM-201ENST00000306049 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
TEFM-201ENST00000306049 GINM1Q9NU53 330 aa11.63□□□□□ -0.55
TEFM-201ENST00000306049 AATFQ9NY61 560 aaKnown RBP eCLIP11.63□□□□□ -0.55
TEFM-201ENST00000306049 THEGQ9P2T0 379 aa11.63□□□□□ -0.55
TEFM-201ENST00000306049 HCN4Q9Y3Q4 1203 aa11.63□□□□□ -0.55
TEFM-201ENST00000306049 ARIH1Q9Y4X5 557 aaPredicted RBP11.63□□□□□ -0.55
TEFM-201ENST00000306049 FLT1P17948 1338 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 SYNGAP1Q96PV0 1343 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 BAG3O95817 575 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 UQCRFS1P1P0C7P4 283 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
TEFM-201ENST00000306049 PLCG2P16885 1265 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 MRPS5P82675 430 aaKnown RBP11.62□□□□□ -0.55
TEFM-201ENST00000306049 MTX1Q13505 466 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 MFSD14CQ5VZR4 134 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 NAA16Q6N069 864 aaPredicted RBP11.62□□□□□ -0.55
TEFM-201ENST00000306049 USP17L2Q6R6M4 530 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 RNPC3Q96LT9 517 aaKnown RBP11.62□□□□□ -0.55
TEFM-201ENST00000306049 GAS2L1Q99501 681 aaPredicted RBP11.62□□□□□ -0.55
TEFM-201ENST00000306049 PALD1Q9ULE6 856 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 ZNF236Q9UL36 1845 aa11.62□□□□□ -0.55
TEFM-201ENST00000306049 DNM1LO00429 736 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 MSCO60682 206 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 CNMDO75829 334 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 GLRX3O76003 335 aaKnown RBP11.61□□□□□ -0.55
TEFM-201ENST00000306049 GNAI3P08754 354 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 CNGA1P29973 690 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 PPP4CP60510 307 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 SLC39A5Q6ZMH5 540 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 LPAR1Q92633 364 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 EDC3Q96F86 508 aaKnown RBP11.61□□□□□ -0.55
TEFM-201ENST00000306049 SNRKQ9NRH2 765 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 FLRT1Q9NZU1 646 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 DDX20Q9UHI6 824 aaKnown RBP11.61□□□□□ -0.55
TEFM-201ENST00000306049 SAP30BPQ9UHR5 308 aaKnown RBP11.61□□□□□ -0.55
TEFM-201ENST00000306049 RABGAP1Q9Y3P9 1069 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 NDUFB9Q9Y6M9 179 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 PLXNA1Q9UIW2 1896 aa11.61□□□□□ -0.55
TEFM-201ENST00000306049 PARP14Q460N5 1801 aa11.6□□□□□ -0.55
TEFM-201ENST00000306049 NAV1Q8NEY1 1877 aa11.6□□□□□ -0.55
TEFM-201ENST00000306049 SLC15A5A6NIM6 579 aa11.6□□□□□ -0.55
TEFM-201ENST00000306049 HLA-DOAP06340 250 aa11.6□□□□□ -0.55
TEFM-201ENST00000306049 DNAJB2P25686 324 aa11.6□□□□□ -0.55
TEFM-201ENST00000306049 CCNA1P78396 465 aa11.6□□□□□ -0.55
TEFM-201ENST00000306049 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
TEFM-201ENST00000306049 WDR78Q5VTH9 848 aa11.6□□□□□ -0.55
TEFM-201ENST00000306049 ADGRA1Q86SQ6 560 aa11.6□□□□□ -0.55
TEFM-201ENST00000306049 TRMT2AQ8IZ69 625 aaKnown RBP11.6□□□□□ -0.55
TEFM-201ENST00000306049 C12orf42Q96LP6 360 aa11.6□□□□□ -0.55
TEFM-201ENST00000306049 ZNF576Q9H609 170 aa11.6□□□□□ -0.55
TEFM-201ENST00000306049 COL11A1P12107 1806 aaPredicted RBP11.6□□□□□ -0.55
TEFM-201ENST00000306049 TCF20Q9UGU0 1960 aaKnown RBP11.59□□□□□ -0.55
TEFM-201ENST00000306049 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.59□□□□□ -0.55
TEFM-201ENST00000306049 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.59□□□□□ -0.55
TEFM-201ENST00000306049 USP17L15C9J2P7 530 aa11.59□□□□□ -0.55
TEFM-201ENST00000306049 USP17L13C9JLJ4 530 aa11.59□□□□□ -0.55
TEFM-201ENST00000306049 USP17L11C9JVI0 530 aa11.59□□□□□ -0.55
TEFM-201ENST00000306049 USP17L18D6R9N7 530 aa11.59□□□□□ -0.55
TEFM-201ENST00000306049 USP17L22D6RA61 530 aa11.59□□□□□ -0.55
TEFM-201ENST00000306049 USP17L17D6RBQ6 530 aa11.59□□□□□ -0.55
TEFM-201ENST00000306049 USP17L19D6RCP7 530 aa11.59□□□□□ -0.55
TEFM-201ENST00000306049 USP17L20D6RJB6 530 aa11.59□□□□□ -0.55
TEFM-201ENST00000306049 GH2P01242 217 aa11.59□□□□□ -0.55
TEFM-201ENST00000306049 CT47B1P0C2W7 299 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms