RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 KINO60870 393 aaKnown RBP7.56□□□□□ -1.2
USP47-201ENST00000305481 NPY5RQ15761 445 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 EARS2Q5JPH6 523 aaKnown RBP7.56□□□□□ -1.2
USP47-201ENST00000305481 DPP8Q6V1X1 898 aaPredicted RBP7.56□□□□□ -1.2
USP47-201ENST00000305481 CLIC6Q96NY7 704 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 NOL10Q9BSC4 688 aaKnown RBP7.56□□□□□ -1.2
USP47-201ENST00000305481 DNAJC25Q9H1X3 360 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 MYH6P13533 1939 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 FAM205CA6NFA0 338 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 CTAGE5O15320 804 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 PFKFB1P16118 471 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 SASS6Q6UVJ0 657 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 DGKHQ86XP1 1220 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 ZC3H12CQ9C0D7 883 aaKnown RBP7.56□□□□□ -1.2
USP47-201ENST00000305481 MKNK2Q9HBH9 465 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 KCNQ5Q9NR82 932 aa7.56□□□□□ -1.2
USP47-201ENST00000305481 ADAMTS3O15072 1205 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 SAFBQ15424 915 aaKnown RBP eCLIP7.55□□□□□ -1.2
USP47-201ENST00000305481 SLC35G1Q2M3R5 365 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 C16orf86Q6ZW13 317 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 ZSCAN30Q86W11 494 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 CAMKK2Q96RR4 588 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 TCP11L1Q9NUJ3 509 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 HPSEQ9Y251 543 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 PCDHB6Q9Y5E3 794 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 BAZ2BQ9UIF8 2168 aaKnown RBP7.55□□□□□ -1.2
USP47-201ENST00000305481 SNED1Q8TER0 1413 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 FAM237AA0A1B0GTK4 181 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 F8W031 263 aaPredicted RBP7.55□□□□□ -1.2
USP47-201ENST00000305481 ZNF202O95125 648 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 CLCN1P35523 988 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 CDK8P49336 464 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 GRIN1Q05586 938 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 EZH2Q15910 746 aaKnown RBP7.55□□□□□ -1.2
USP47-201ENST00000305481 NOM1Q5C9Z4 860 aaKnown RBP7.55□□□□□ -1.2
USP47-201ENST00000305481 C11orf57Q6ZUT1 292 aaPredicted RBP7.55□□□□□ -1.2
USP47-201ENST00000305481 CERS3Q8IU89 383 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 STAG2Q8N3U4 1231 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 ZNF622Q969S3 477 aaKnown RBP eCLIP7.55□□□□□ -1.2
USP47-201ENST00000305481 NOL7Q9UMY1 257 aaKnown RBP7.55□□□□□ -1.2
USP47-201ENST00000305481 RGPD3A6NKT7 1758 aaPredicted RBP7.55□□□□□ -1.2
USP47-201ENST00000305481 RGPD4Q7Z3J3 1758 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 ZNF165P49910 485 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 AKAP17AQ02040 695 aaKnown RBP7.55□□□□□ -1.2
USP47-201ENST00000305481 EN1Q05925 392 aaPredicted RBP7.55□□□□□ -1.2
USP47-201ENST00000305481 RESP18Q5W5W9 173 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 C2CD5Q86YS7 1000 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 PNMA1Q8ND90 353 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 CTCFLQ8NI51 663 aaPredicted RBP7.55□□□□□ -1.2
USP47-201ENST00000305481 TNFRSF25Q93038 417 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 CABP5Q9NP86 173 aa7.55□□□□□ -1.2
USP47-201ENST00000305481 WNT7AO00755 349 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 TSPY3P0CV98 308 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 TSPY8P0CW00 308 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 PLCG2P16885 1265 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 CHRNA5P30532 468 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 IQCB1Q15051 598 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 SLC15A2Q16348 729 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 RASGRP2Q7LDG7 609 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 SLF2Q8IX21 1173 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 AMOTL1Q8IY63 956 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 ZNF444Q8N0Y2 327 aaPredicted RBP7.54□□□□□ -1.2
USP47-201ENST00000305481 KAT14Q9H8E8 782 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 MAD2L2Q9UI95 211 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 SUGT1Q9Y2Z0 365 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 FOCADQ5VW36 1801 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 QSER1Q2KHR3 1735 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 SLX4Q8IY92 1834 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 NT5C2P49902 561 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 RILPL1Q5EBL4 403 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 PIBF1Q8WXW3 757 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 FBXW7Q969H0 707 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 TMEM47Q9BQJ4 181 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 SDF4Q9BRK5 362 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 PDGFDQ9GZP0 370 aaPredicted RBP7.54□□□□□ -1.2
USP47-201ENST00000305481 DDX4Q9NQI0 724 aaKnown RBP7.54□□□□□ -1.2
USP47-201ENST00000305481 FBXO2Q9UK22 296 aaPredicted RBP7.54□□□□□ -1.2
USP47-201ENST00000305481 TTF2Q9UNY4 1162 aaKnown RBP7.54□□□□□ -1.2
USP47-201ENST00000305481 ADAMTSL1Q8N6G6 1762 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 SCNN1DP51172 638 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 GRM4Q14833 912 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 PFKFB3Q16875 520 aaPredicted RBP7.54□□□□□ -1.2
USP47-201ENST00000305481 DBNDD1Q9H9R9 158 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 KIAA1468Q9P260 1216 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 CCDC39Q9UFE4 941 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 MYH1P12882 1939 aa7.54□□□□□ -1.2
USP47-201ENST00000305481 H0YIN7 160 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 CYTH3O43739 400 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 CUTAO60888 179 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 SCG2P13521 617 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 KRT2P35908 639 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 PLCB2Q00722 1185 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 STX1AQ16623 288 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 SPECC1Q5M775 1068 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 STYK1Q6J9G0 422 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 JMYQ8N9B5 988 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 KRI1Q8N9T8 703 aaKnown RBP7.53□□□□□ -1.2
USP47-201ENST00000305481 NEDD1Q8NHV4 660 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 C7orf43Q8WVR3 580 aa7.53□□□□□ -1.2
USP47-201ENST00000305481 EYA3Q99504 573 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms