RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 MXD3Q9BW11 206 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 CPVLQ9H3G5 476 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 NHSL1Q5SYE7 1610 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 LDHBP07195 334 aaKnown RBP14.59□□□□□ -0.07
VAT1L-201ENST00000302536 KRT27Q7Z3Y8 459 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 SMARCC2Q8TAQ2 1214 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 PCDHA7Q9UN72 937 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 V9GY48 417 aaPredicted RBP14.59□□□□□ -0.07
VAT1L-201ENST00000302536 DOT1LQ8TEK3 1739 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 SAFBQ15424 915 aaKnown RBP eCLIP14.59□□□□□ -0.07
VAT1L-201ENST00000302536 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 FNBP4Q8N3X1 1017 aaPredicted RBP14.59□□□□□ -0.07
VAT1L-201ENST00000302536 FBXO18Q8NFZ0 1043 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 ESR2Q92731 530 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 LLPHQ9BRT6 129 aaKnown RBP14.59□□□□□ -0.07
VAT1L-201ENST00000302536 LY9Q9HBG7 655 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 MYH14Q7Z406 1995 aaKnown RBP14.59□□□□□ -0.07
VAT1L-201ENST00000302536 TEX2Q8IWB9 1127 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 CAPZA3Q96KX2 299 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 KRT23Q9C075 422 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 TAF1P21675 1872 aa14.59□□□□□ -0.07
VAT1L-201ENST00000302536 UTRNP46939 3433 aa14.58□□□□□ -0.07
VAT1L-201ENST00000302536 PRR29P0C7W0 189 aa14.58□□□□□ -0.07
VAT1L-201ENST00000302536 PPP2R3AQ06190 1150 aa14.58□□□□□ -0.07
VAT1L-201ENST00000302536 SF3B3Q15393 1217 aaKnown RBP14.58□□□□□ -0.07
VAT1L-201ENST00000302536 PRR5LQ6MZQ0 368 aa14.58□□□□□ -0.07
VAT1L-201ENST00000302536 ABCA3Q99758 1704 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 SPTLC2O15270 562 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 IQCA1Q86XH1 822 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 ZNF654Q8IZM8 581 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 JRKLQ9Y4A0 524 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 SLIT2O94813 1529 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 RFX7Q2KHR2 1363 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 SCNN1DP51172 638 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 ADKP55263 362 aaKnown RBP14.58□□□□□ -0.08
VAT1L-201ENST00000302536 MYSM1Q5VVJ2 828 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 BANK1Q8NDB2 785 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 IGDCC4Q8TDY8 1250 aa14.58□□□□□ -0.08
VAT1L-201ENST00000302536 CRNKL1Q9BZJ0 848 aaKnown RBP14.58□□□□□ -0.08
VAT1L-201ENST00000302536 PPP1R1BQ9UD71 204 aaPredicted RBP14.58□□□□□ -0.08
VAT1L-201ENST00000302536 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.58□□□□□ -0.08
VAT1L-201ENST00000302536 EIF3JO75822 258 aaKnown RBP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 IPO7O95373 1038 aaKnown RBP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 PLA2G4AP47712 749 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 RBM5P52756 815 aaKnown RBP eCLIP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 GSDMDP57764 484 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 GTF2IP78347 998 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 ICE2Q659A1 982 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 CLSTN2Q9H4D0 955 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 COL16A1Q07092 1604 aaPredicted RBP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 CDKL5O76039 1030 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 NDUFA8P51970 172 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 SYCP1Q15431 976 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 FAM170AA1A519 330 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 KIF2AO00139 706 aaPredicted RBP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 PLEKHA8P1O95397 391 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 GOLGA8HP0CJ92 632 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 SLURP2P0DP57 97 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 GPSM2P81274 684 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 ENOX2Q16206 610 aaKnown RBP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 RNF187Q5TA31 235 aaPredicted RBP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 TTC19Q6DKK2 380 aaPredicted RBP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 ILDR1Q86SU0 546 aaPredicted RBP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 DIS3L2Q8IYB7 885 aaKnown RBP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 UIMC1Q96RL1 719 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 RNF41Q9H4P4 317 aaPredicted RBP14.57□□□□□ -0.08
VAT1L-201ENST00000302536 CABP5Q9NP86 173 aa14.57□□□□□ -0.08
VAT1L-201ENST00000302536 FAM205CA6NFA0 338 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 COBLO75128 1261 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 ERLIN1O75477 346 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 TRMT44Q8IYL2 757 aaKnown RBP14.56□□□□□ -0.08
VAT1L-201ENST00000302536 LAMB4A4D0S4 1761 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 SSBP05455 408 aaKnown RBP eCLIP14.56□□□□□ -0.08
VAT1L-201ENST00000302536 RDXP35241 583 aaKnown RBP14.56□□□□□ -0.08
VAT1L-201ENST00000302536 RASGRP2Q7LDG7 609 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 OXER1Q8TDS5 423 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 SH3RF3Q8TEJ3 882 aaPredicted RBP14.56□□□□□ -0.08
VAT1L-201ENST00000302536 ANKRD2Q9GZV1 360 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 CNNM2Q9H8M5 875 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 ZMYM6O95789 1325 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 N4BP2Q86UW6 1770 aaPredicted RBP14.56□□□□□ -0.08
VAT1L-201ENST00000302536 CATIPQ7Z7H3 387 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 TMEM87AQ8NBN3 555 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 CNNM3Q8NE01 707 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 ZNF384Q8TF68 577 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 TMEM87BQ96K49 555 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 FHOD1Q9Y613 1164 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 SHANK3Q9BYB0 1731 aa14.56□□□□□ -0.08
VAT1L-201ENST00000302536 USP17L3A6NCW0 530 aa14.55□□□□□ -0.08
VAT1L-201ENST00000302536 USP17L4A6NCW7 530 aa14.55□□□□□ -0.08
VAT1L-201ENST00000302536 ZSCAN12O43309 604 aa14.55□□□□□ -0.08
VAT1L-201ENST00000302536 NEMFO60524 1076 aa14.55□□□□□ -0.08
VAT1L-201ENST00000302536 USP17L1Q7RTZ2 530 aa14.55□□□□□ -0.08
VAT1L-201ENST00000302536 FAM212AQ96EL1 285 aa14.55□□□□□ -0.08
VAT1L-201ENST00000302536 CRACR2AQ9BSW2 395 aa14.55□□□□□ -0.08
VAT1L-201ENST00000302536 HOOK1Q9UJC3 728 aaKnown RBP14.55□□□□□ -0.08
VAT1L-201ENST00000302536 TULP2O00295 520 aa14.55□□□□□ -0.08
VAT1L-201ENST00000302536 GNAT2P19087 354 aa14.55□□□□□ -0.08
VAT1L-201ENST00000302536 KIF23Q02241 960 aaPredicted RBP14.55□□□□□ -0.08
VAT1L-201ENST00000302536 MFSD14BQ5SR56 506 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms