RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 LPIN2Q92539 896 aa12.85□□□□□ -0.35
ATP1A3-201ENST00000302102 DDX41Q9UJV9 622 aaKnown RBP12.85□□□□□ -0.35
ATP1A3-201ENST00000302102 PDE8AO60658 829 aa12.85□□□□□ -0.35
ATP1A3-201ENST00000302102 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
ATP1A3-201ENST00000302102 DEXIO95424 95 aa12.85□□□□□ -0.35
ATP1A3-201ENST00000302102 ASIC1P78348 528 aa12.85□□□□□ -0.35
ATP1A3-201ENST00000302102 SMC1AQ14683 1233 aaKnown RBP12.85□□□□□ -0.35
ATP1A3-201ENST00000302102 ENGASEQ8NFI3 743 aa12.85□□□□□ -0.35
ATP1A3-201ENST00000302102 TFR2Q9UP52 801 aa12.85□□□□□ -0.35
ATP1A3-201ENST00000302102 CAMTA1Q9Y6Y1 1673 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 WTIPA6NIX2 430 aaPredicted RBP12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 SH2B2O14492 632 aaPredicted RBP12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 RBM6P78332 1123 aaKnown RBP12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 RBL2Q08999 1139 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 RGS22Q8NE09 1264 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 EIF3JO75822 258 aaKnown RBP12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 PICALMQ13492 652 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 CCDC122Q5T0U0 273 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 NLRP10Q86W26 655 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 METTL16Q86W50 562 aaKnown RBP12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 HPS5Q9UPZ3 1129 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 KIF20AO95235 890 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 PPARAQ07869 468 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 TTC38Q5R3I4 469 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 CALCOCO1Q9P1Z2 691 aa12.84□□□□□ -0.35
ATP1A3-201ENST00000302102 HEG1Q9ULI3 1381 aa12.83□□□□□ -0.35
ATP1A3-201ENST00000302102 AKR1B10O60218 316 aa12.83□□□□□ -0.36
ATP1A3-201ENST00000302102 PNMA6AP0CW24 399 aaPredicted RBP12.83□□□□□ -0.36
ATP1A3-201ENST00000302102 DYMQ7RTS9 669 aa12.83□□□□□ -0.36
ATP1A3-201ENST00000302102 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
ATP1A3-201ENST00000302102 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.36
ATP1A3-201ENST00000302102 TBC1D7Q9P0N9 293 aa12.83□□□□□ -0.36
ATP1A3-201ENST00000302102 UBN2Q6ZU65 1347 aa12.83□□□□□ -0.36
ATP1A3-201ENST00000302102 CPDO75976 1380 aa12.83□□□□□ -0.36
ATP1A3-201ENST00000302102 H0YHG0 523 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 PCCAP05165 728 aaPredicted RBP12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 TSGA10IPQ3SY00 556 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 TTC19Q6DKK2 380 aaPredicted RBP12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 GIGYF2Q6Y7W6 1299 aaKnown RBP12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 STRBPQ96SI9 672 aaKnown RBP12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 SEPT11Q9NVA2 429 aaKnown RBP12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 TSPY3P0CV98 308 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 TSPY8P0CW00 308 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 SPA17Q15506 151 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 SARM1Q6SZW1 724 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 SLC35F6Q8N357 371 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 IQUBQ8NA54 791 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 SUGCTQ9HAC7 445 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 PDE11AQ9HCR9 933 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 POLD4Q9HCU8 107 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 TERF2Q15554 542 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 MLKLQ8NB16 471 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 ANKRD7Q92527 254 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 GPR101Q96P66 508 aaPredicted RBP12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 TEX13AQ9BXU3 409 aaPredicted RBP12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 PARD6BQ9BYG5 372 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 ACBD3Q9H3P7 528 aa12.82□□□□□ -0.36
ATP1A3-201ENST00000302102 NCAPH2Q6IBW4 605 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 KANK3Q6NY19 840 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 CTR9Q6PD62 1173 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 FAM207AQ9NSI2 230 aaPredicted RBP12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 CWC15Q9P013 229 aaKnown RBP12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 LUC7L2Q9Y383 392 aaKnown RBP12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 PP2D1A8MPX8 630 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 SMARCC1Q92922 1105 aaPredicted RBP12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 TSPYL1Q9H0U9 437 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 PRDM4Q9UKN5 801 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 GDAQ9Y2T3 454 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 COL5A2P05997 1499 aaPredicted RBP12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 ROBO1Q9Y6N7 1651 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 TRIM49BA6NDI0 452 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 SRGAP2O75044 1071 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 CYP2D6P10635 497 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 CDC25BP30305 580 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 NAPAP54920 295 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 CYP27A1Q02318 531 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 CHRNDQ07001 517 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 INF2Q27J81 1249 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 VSTM4Q8IW00 320 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 NELFBQ8WX92 580 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 TCP11L1Q9NUJ3 509 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 BCCIPQ9P287 314 aaKnown RBP eCLIP12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 SLIT3O75094 1523 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
ATP1A3-201ENST00000302102 TBC1D8BQ0IIM8 1120 aa12.8□□□□□ -0.36
ATP1A3-201ENST00000302102 TCERG1LQ5VWI1 586 aa12.8□□□□□ -0.36
ATP1A3-201ENST00000302102 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
ATP1A3-201ENST00000302102 A0A0U1RQJ8 604 aa12.8□□□□□ -0.36
ATP1A3-201ENST00000302102 TXKP42681 527 aa12.8□□□□□ -0.36
ATP1A3-201ENST00000302102 FOXP4Q8IVH2 680 aaPredicted RBP12.8□□□□□ -0.36
ATP1A3-201ENST00000302102 TMTC2Q8N394 836 aa12.8□□□□□ -0.36
ATP1A3-201ENST00000302102 ATRIPQ8WXE1 791 aa12.8□□□□□ -0.36
ATP1A3-201ENST00000302102 KCNB2Q92953 911 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms