RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 I3L4J1 428 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 RAD50Q92878 1312 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 TRPA1O75762 1119 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 IFT88Q13099 833 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 RPS6KA1Q15418 735 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 CFAP61Q8NHU2 1237 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 TSPYL2Q9H2G4 693 aaPredicted RBP13.69□□□□□ -0.22
ABCA3-201ENST00000301732 EIF4A2Q14240 407 aaKnown RBP13.69□□□□□ -0.22
ABCA3-201ENST00000301732 UBL4BQ8N7F7 174 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
ABCA3-201ENST00000301732 CCDC89Q8N998 374 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 IL15P40933 162 aaPredicted RBP13.69□□□□□ -0.22
ABCA3-201ENST00000301732 NLRP12P59046 1061 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 OGFOD1Q8N543 542 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 NLRP3Q96P20 1036 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 SLC4A1P02730 911 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 CUL4BQ13620 913 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 CALML3P27482 149 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 MAP7Q14244 749 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 RASIP1Q5U651 963 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 BRAPQ7Z569 592 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 DHX29Q7Z478 1369 aaKnown RBP13.68□□□□□ -0.22
ABCA3-201ENST00000301732 RTL9Q8NET4 1388 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 POC1B-GALNT4F8VUJ3 575 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 LDHBP07195 334 aaKnown RBP13.68□□□□□ -0.22
ABCA3-201ENST00000301732 IDI1Q13907 227 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 TTC38Q5R3I4 469 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 TCP11Q8WWU5 503 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 FNDC3AQ9Y2H6 1198 aaKnown RBP13.68□□□□□ -0.22
ABCA3-201ENST00000301732 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
ABCA3-201ENST00000301732 ATP5DP30049 168 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 SNX1Q13596 522 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 MCUQ8NE86 351 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 SCYL1Q96KG9 808 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.68□□□□□ -0.22
ABCA3-201ENST00000301732 TTF2Q9UNY4 1162 aaKnown RBP13.68□□□□□ -0.22
ABCA3-201ENST00000301732 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 SMYD4Q8IYR2 804 aaPredicted RBP13.68□□□□□ -0.22
ABCA3-201ENST00000301732 DCTPP1Q9H773 170 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 NOS1P29475 1434 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 FRMPD2Q68DX3 1309 aaPredicted RBP13.68□□□□□ -0.22
ABCA3-201ENST00000301732 WDR91A4D1P6 747 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 SLCO1A2P46721 670 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 ANKFY1Q9P2R3 1169 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
ABCA3-201ENST00000301732 EXOC3O60645 756 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 VAMP4O75379 141 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 WHAMMP3Q1A5X7 153 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 HP1BP3Q5SSJ5 553 aaPredicted RBP13.67□□□□□ -0.22
ABCA3-201ENST00000301732 TAOK1Q7L7X3 1001 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 GAS2L3Q86XJ1 694 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 ZBTB40Q9NUA8 1239 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 DNAJC17Q9NVM6 304 aaKnown RBP13.67□□□□□ -0.22
ABCA3-201ENST00000301732 ARHGEF11O15085 1522 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 TPH2Q8IWU9 490 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 KIFAP3Q92845 792 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 GIPC1O14908 333 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 RBBP5Q15291 538 aaKnown RBP13.67□□□□□ -0.22
ABCA3-201ENST00000301732 TMTC4Q5T4D3 741 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 PALM2Q8IXS6 379 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 TBK1Q9UHD2 729 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 ABCC5O15440 1437 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 KRIT1O00522 736 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 PFDN1O60925 122 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 ITKQ08881 620 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 NCBP1Q09161 790 aaKnown RBP13.67□□□□□ -0.22
ABCA3-201ENST00000301732 POMGNT1Q8WZA1 660 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 KRT12Q99456 494 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 GNA11P29992 359 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 PPP4R4Q6NUP7 873 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 RNF169Q8NCN4 708 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 CAPS2Q9BXY5 557 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 VCXQ9H320 206 aa13.67□□□□□ -0.22
ABCA3-201ENST00000301732 CFBP00751 764 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 ADCY8P40145 1251 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 GNAQP50148 359 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 TMED1Q13445 227 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 SMAD1Q15797 465 aaKnown RBP13.66□□□□□ -0.22
ABCA3-201ENST00000301732 TMEM259Q4ZIN3 620 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 LRCH2Q5VUJ6 765 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 NACA2Q9H009 215 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
ABCA3-201ENST00000301732 ZCRB1Q8TBF4 217 aaKnown RBP13.66□□□□□ -0.22
ABCA3-201ENST00000301732 GOLGA8HP0CJ92 632 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 RPS6KA2Q15349 733 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 ME3Q16798 604 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 CFAP221Q4G0U5 840 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 ZNF804AQ7Z570 1209 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 GDAP1Q8TB36 358 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 TECP42680 631 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 PAK2Q13177 524 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 SFMBT2Q5VUG0 894 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 JPH2Q9BR39 696 aaPredicted RBP13.66□□□□□ -0.22
ABCA3-201ENST00000301732 SLC24A3Q9HC58 644 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 CD2APQ9Y5K6 639 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 GPAA1O43292 621 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 CNNM4Q6P4Q7 775 aa13.66□□□□□ -0.22
ABCA3-201ENST00000301732 SAR1BQ9Y6B6 198 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms