RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.56■■□□□ 1.042e-22■■■□□ 15.2
TSR1-201ENST00000301364 ADCY7P51828 1080 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 SELENOSQ9BQE4 189 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 HOMER2Q9NSB8 354 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 SAR1BQ9Y6B6 198 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 hCG_1642624A0A1W2PR95 340 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 GNPATO15228 680 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 MSL1Q68DK7 614 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 RBM17Q96I25 401 aaKnown RBP21.55■■□□□ 1.04
TSR1-201ENST00000301364 ARAP3Q8WWN8 1544 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 TNKSO95271 1327 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 FERMT1Q9BQL6 677 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 MAST3O60307 1309 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 PCDHA5Q9Y5H7 936 aa21.55■■□□□ 1.04
TSR1-201ENST00000301364 GOLGA6BA6NDN3 693 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 H7C1D1 291 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 LARGE1O95461 756 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 PCP11498 1178 aaKnown RBP21.54■■□□□ 1.04
TSR1-201ENST00000301364 LRRC45Q96CN5 670 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 ATP6V0A2Q9Y487 856 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 TLDC2A0PJX2 215 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 KCNJ18B7U540 433 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 USP17L12C9JPN9 530 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 USP17L21D6R901 530 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 CALUO43852 315 aaPredicted RBP21.54■■□□□ 1.04
TSR1-201ENST00000301364 PDE8BO95263 885 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 KCNJ12Q14500 433 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 C6orf163Q5TEZ5 329 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 CACTINQ8WUQ7 758 aaKnown RBP21.54■■□□□ 1.04
TSR1-201ENST00000301364 ZBTB9Q96C00 473 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 TRAPPC3LQ5T215 181 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 LINC00301Q8NCQ3 95 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 CLIC6Q96NY7 704 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 TMEM110-MUSTN1A8MSY1 372 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 UFL1O94874 794 aa21.54■■□□□ 1.04
TSR1-201ENST00000301364 DNM2P50570 870 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 CALCRLQ16602 461 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 UTP14CQ5TAP6 766 aaKnown RBP21.53■■□□□ 1.04
TSR1-201ENST00000301364 APOA5Q6Q788 366 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 IPO4Q8TEX9 1081 aaKnown RBP21.53■■□□□ 1.04
TSR1-201ENST00000301364 UBLCP1Q8WVY7 318 aaPredicted RBP21.53■■□□□ 1.04
TSR1-201ENST00000301364 SASH1O94885 1247 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 MORC3Q14149 939 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 HERC4Q5GLZ8 1057 aaPredicted RBP21.53■■□□□ 1.04
TSR1-201ENST00000301364 REXO1Q8N1G1 1221 aaKnown RBP21.53■■□□□ 1.04
TSR1-201ENST00000301364 PNPLA6Q8IY17 1366 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 GTPBP6O43824 516 aaPredicted RBP21.53■■□□□ 1.04
TSR1-201ENST00000301364 ERCC5P28715 1186 aaPredicted RBP21.53■■□□□ 1.04
TSR1-201ENST00000301364 PPFIA1Q13136 1202 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 CFAP221Q4G0U5 840 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 SEL1L2Q5TEA6 688 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 BLIDQ8IZY5 108 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 FOXP1Q9H334 677 aaPredicted RBP21.53■■□□□ 1.04
TSR1-201ENST00000301364 RESTQ13127 1097 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 CCDC114Q96M63 670 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 HAUS4Q9H6D7 363 aa21.53■■□□□ 1.04
TSR1-201ENST00000301364 NDUFAB1O14561 156 aa21.52■■□□□ 1.04
TSR1-201ENST00000301364 MPHOSPH6Q99547 160 aaKnown RBP21.52■■□□□ 1.04
TSR1-201ENST00000301364 PTPN12Q05209 780 aaKnown RBP21.52■■□□□ 1.04
TSR1-201ENST00000301364 C11orf57Q6ZUT1 292 aaPredicted RBP21.52■■□□□ 1.04
TSR1-201ENST00000301364 DESI2Q9BSY9 194 aa21.52■■□□□ 1.04
TSR1-201ENST00000301364 IFIH1Q9BYX4 1025 aaKnown RBP21.52■■□□□ 1.04
TSR1-201ENST00000301364 NF2P35240 595 aa21.52■■□□□ 1.04
TSR1-201ENST00000301364 PAK2Q13177 524 aa21.52■■□□□ 1.04
TSR1-201ENST00000301364 LONRF3Q496Y0 759 aa21.52■■□□□ 1.04
TSR1-201ENST00000301364 SYNCQ9H7C4 482 aa21.52■■□□□ 1.04
TSR1-201ENST00000301364 SAMD15Q9P1V8 674 aa21.52■■□□□ 1.04
TSR1-201ENST00000301364 TNFAIP3P21580 790 aa21.52■■□□□ 1.03
TSR1-201ENST00000301364 WDR78Q5VTH9 848 aa21.52■■□□□ 1.03
TSR1-201ENST00000301364 GSTA5Q7RTV2 222 aa21.52■■□□□ 1.03
TSR1-201ENST00000301364 GPATCH11Q8N954 259 aa21.52■■□□□ 1.03
TSR1-201ENST00000301364 TFCP2L1Q9NZI6 479 aa21.52■■□□□ 1.03
TSR1-201ENST00000301364 ACTN4O43707 911 aaKnown RBP21.51■■□□□ 1.03
TSR1-201ENST00000301364 TOM1O60784 492 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 GALNT17Q6IS24 598 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 RGS22Q8NE09 1264 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 GSDMAQ96QA5 445 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 GGA1Q9UJY5 639 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 DDAH1O94760 285 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 ZNF827Q17R98 1081 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 DPCR1Q3MIW9 517 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 TRIM58Q8NG06 486 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 PUS3Q9BZE2 481 aaKnown RBP21.51■■□□□ 1.03
TSR1-201ENST00000301364 MKRN1Q9UHC7 482 aaKnown RBP21.51■■□□□ 1.03
TSR1-201ENST00000301364 MAP3K15Q6ZN16 1313 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 MADDQ8WXG6 1647 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 PPP1R13BQ96KQ4 1090 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 IQCGQ9H095 443 aaKnown RBP21.51■■□□□ 1.03
TSR1-201ENST00000301364 MED14O60244 1454 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 RIMBP2O15034 1052 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 PPP1R7Q15435 360 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 FAM47AQ5JRC9 791 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 RUFY4Q6ZNE9 571 aa21.51■■□□□ 1.03
TSR1-201ENST00000301364 SCG2P13521 617 aa21.5■■□□□ 1.03
TSR1-201ENST00000301364 EEF2P13639 858 aaKnown RBP21.5■■□□□ 1.03
TSR1-201ENST00000301364 KIF23Q02241 960 aaPredicted RBP21.5■■□□□ 1.03
TSR1-201ENST00000301364 DYMQ7RTS9 669 aa21.5■■□□□ 1.03
TSR1-201ENST00000301364 FBF1Q8TES7 1133 aa21.5■■□□□ 1.03
TSR1-201ENST00000301364 PAIP2Q9BPZ3 127 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms