RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 PPANQ9NQ55 473 aaKnown RBP12.46□□□□□ -0.41
GCN1-201ENST00000300648 TXLNGQ9NUQ3 528 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 CAPN7Q9Y6W3 813 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 U2AF2P26368 475 aaKnown RBP eCLIP12.46□□□□□ -0.413e-7■□□□□ 11.3
GCN1-201ENST00000300648 CCDC93Q567U6 631 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 BAIAP2L1Q9UHR4 511 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 OPHN1O60890 802 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 PDZD4Q76G19 769 aaPredicted RBP12.46□□□□□ -0.41
GCN1-201ENST00000300648 MRFAP1L1Q96HT8 127 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 RILPQ96NA2 401 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 VWA3AA6NCI4 1184 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 TNNI2P48788 182 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 ZC3H6P61129 1189 aaKnown RBP12.46□□□□□ -0.41
GCN1-201ENST00000300648 STRN3Q13033 797 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 PARP10Q53GL7 1025 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 KRT25Q7Z3Z0 450 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 CCHCR1Q8TD31 782 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 HYOU1Q9Y4L1 999 aa12.46□□□□□ -0.41
GCN1-201ENST00000300648 WDR46O15213 610 aaKnown RBP12.46□□□□□ -0.42
GCN1-201ENST00000300648 MPRIPQ6WCQ1 1025 aa12.46□□□□□ -0.42
GCN1-201ENST00000300648 NLRP7Q8WX94 980 aa12.46□□□□□ -0.42
GCN1-201ENST00000300648 RNF14Q9UBS8 474 aa12.46□□□□□ -0.42
GCN1-201ENST00000300648 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.42
GCN1-201ENST00000300648 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.42
GCN1-201ENST00000300648 ABCA5Q8WWZ7 1642 aa12.46□□□□□ -0.42
GCN1-201ENST00000300648 ZNF202O95125 648 aa12.46□□□□□ -0.42
GCN1-201ENST00000300648 MRPL50Q8N5N7 158 aaKnown RBP12.46□□□□□ -0.42
GCN1-201ENST00000300648 DCAF5Q96JK2 942 aa12.46□□□□□ -0.42
GCN1-201ENST00000300648 FAM81BQ96LP2 452 aa12.46□□□□□ -0.42
GCN1-201ENST00000300648 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.46□□□□□ -0.42
GCN1-201ENST00000300648 HAUS4Q9H6D7 363 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
GCN1-201ENST00000300648 EIF3DO15371 548 aaKnown RBP eCLIP12.45□□□□□ -0.424e-6■■■□□ 15
GCN1-201ENST00000300648 BIRC3Q13489 604 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 HSP90AA4PQ58FG1 418 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 TPTE2Q6XPS3 522 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 NGLY1Q96IV0 654 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 KRT12Q99456 494 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 ABCC2Q92887 1545 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 KRT28Q7Z3Y7 464 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 PLEKHM2Q8IWE5 1019 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 TXNDC9O14530 226 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 PDE4DQ08499 809 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 DCUN1D2Q6PH85 259 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 SHROOM2Q13796 1616 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
GCN1-201ENST00000300648 KDM5DQ9BY66 1539 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 ABCD1P33897 745 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 INPP1P49441 399 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 RPS6KA2Q15349 733 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 RPAINQ86UA6 219 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 EFCC1Q9HA90 598 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 ASPHQ12797 758 aa12.45□□□□□ -0.42
GCN1-201ENST00000300648 PFDN1O60925 122 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 RASA3Q14644 834 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 CARD6Q9BX69 1037 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 TM6SF1Q9BZW5 370 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 ACTR5Q9H9F9 607 aaPredicted RBP12.44□□□□□ -0.42
GCN1-201ENST00000300648 DDX21Q9NR30 783 aaKnown RBP eCLIP12.44□□□□□ -0.42
GCN1-201ENST00000300648 IPO11Q9UI26 975 aaKnown RBP12.44□□□□□ -0.42
GCN1-201ENST00000300648 RIPOR2Q9Y4F9 1068 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 ARHGEF10O15013 1369 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 TBC1D8O95759 1140 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 PDE6BP35913 854 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 CEP85Q6P2H3 762 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 PPP1R21Q6ZMI0 780 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 PASKQ96RG2 1323 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 CENPKQ9BS16 269 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 CTTNBP2NLQ9P2B4 639 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 KRT9P35527 623 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 TAF12Q16514 161 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
GCN1-201ENST00000300648 DAPK3O43293 454 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 KLHL30Q0D2K2 578 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 CSRNP1Q96S65 589 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 IQSEC3Q9UPP2 1182 aaPredicted RBP12.44□□□□□ -0.42
GCN1-201ENST00000300648 ASXL2Q76L83 1435 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 TTC4O95801 387 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 PDE1CQ14123 709 aaPredicted RBP12.44□□□□□ -0.42
GCN1-201ENST00000300648 PODNQ7Z5L7 613 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 ARHGAP42A6NI28 874 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 RNF8O76064 485 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 DNM2P50570 870 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 IL9RQ01113 521 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 FAM8A1Q9UBU6 413 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 NOC2LQ9Y3T9 749 aaKnown RBP12.44□□□□□ -0.42
GCN1-201ENST00000300648 CLASP1Q7Z460 1538 aa12.44□□□□□ -0.42
GCN1-201ENST00000300648 ZCRB1Q8TBF4 217 aaKnown RBP12.43□□□□□ -0.42
GCN1-201ENST00000300648 PCDHB15Q9Y5E8 787 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 ADGRL2O95490 1459 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 NBPF9Q3BBW0 867 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 GALNT17Q6IS24 598 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 CALR3Q96L12 384 aaKnown RBP12.43□□□□□ -0.42
GCN1-201ENST00000300648 ZBTB40Q9NUA8 1239 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 ARHGEF5Q12774 1597 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 LMNAP02545 664 aaKnown RBP12.43□□□□□ -0.42
GCN1-201ENST00000300648 SKIP12755 728 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 ERCC3P19447 782 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms