RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 GJA3Q9Y6H8 435 aa16.08■□□□□ 0.17
CCDC178-201ENST00000300227 RCAN1P53805 252 aa16.08■□□□□ 0.16
CCDC178-201ENST00000300227 SH3BP5LQ7L8J4 393 aa16.08■□□□□ 0.16
CCDC178-201ENST00000300227 TRIM34Q9BYJ4 488 aa16.08■□□□□ 0.16
CCDC178-201ENST00000300227 ZSCAN16Q9H4T2 348 aaPredicted RBP16.08■□□□□ 0.16
CCDC178-201ENST00000300227 TRIM29Q14134 588 aa16.08■□□□□ 0.16
CCDC178-201ENST00000300227 GSE1Q14687 1217 aa16.08■□□□□ 0.16
CCDC178-201ENST00000300227 V9GY48 417 aaPredicted RBP16.08■□□□□ 0.16
CCDC178-201ENST00000300227 LAMB1P07942 1786 aa16.07■□□□□ 0.16
CCDC178-201ENST00000300227 PRELPP51888 382 aa16.07■□□□□ 0.16
CCDC178-201ENST00000300227 KLHL40Q2TBA0 621 aa16.07■□□□□ 0.16
CCDC178-201ENST00000300227 KRT40Q6A162 431 aa16.07■□□□□ 0.16
CCDC178-201ENST00000300227 CAVIN1Q6NZI2 390 aaKnown RBP16.07■□□□□ 0.16
CCDC178-201ENST00000300227 RASGRP2Q7LDG7 609 aa16.07■□□□□ 0.16
CCDC178-201ENST00000300227 NBPF11Q86T75 865 aa16.07■□□□□ 0.16
CCDC178-201ENST00000300227 FTOQ9C0B1 505 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCDC178-201ENST00000300227 SCAF8Q9UPN6 1271 aaKnown RBP16.07■□□□□ 0.16
CCDC178-201ENST00000300227 SHMT1P34896 483 aa16.07■□□□□ 0.16
CCDC178-201ENST00000300227 ATP2B2Q01814 1243 aa16.07■□□□□ 0.16
CCDC178-201ENST00000300227 ARHGAP27Q6ZUM4 889 aa16.07■□□□□ 0.16
CCDC178-201ENST00000300227 AGBL3Q8NEM8 1001 aa16.07■□□□□ 0.16
CCDC178-201ENST00000300227 RBM28Q9NW13 759 aaKnown RBP16.07■□□□□ 0.16
CCDC178-201ENST00000300227 GNL2Q13823 731 aaKnown RBP16.06■□□□□ 0.16
CCDC178-201ENST00000300227 CCDC178Q5BJE1 867 aa16.06■□□□□ 0.16
CCDC178-201ENST00000300227 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC178-201ENST00000300227 DHX36Q9H2U1 1008 aaKnown RBP16.06■□□□□ 0.16
CCDC178-201ENST00000300227 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
CCDC178-201ENST00000300227 RBM27Q9P2N5 1060 aaKnown RBP16.06■□□□□ 0.16
CCDC178-201ENST00000300227 PI4KBQ9UBF8 816 aa16.06■□□□□ 0.16
CCDC178-201ENST00000300227 KCNJ14Q9UNX9 436 aa16.06■□□□□ 0.16
CCDC178-201ENST00000300227 NID2Q14112 1375 aa16.06■□□□□ 0.16
CCDC178-201ENST00000300227 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
CCDC178-201ENST00000300227 TMTC3Q6ZXV5 915 aa16.06■□□□□ 0.16
CCDC178-201ENST00000300227 DNAJC18Q9H819 358 aa16.06■□□□□ 0.16
CCDC178-201ENST00000300227 ZNF70Q9UC06 446 aaPredicted RBP16.06■□□□□ 0.16
CCDC178-201ENST00000300227 SWAP70Q9UH65 585 aa16.06■□□□□ 0.16
CCDC178-201ENST00000300227 GOLGA8HP0CJ92 632 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 TNIP1Q15025 636 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 STAG2Q8N3U4 1231 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 SRBD1Q8N5C6 995 aaKnown RBP16.05■□□□□ 0.16
CCDC178-201ENST00000300227 DEXIO95424 95 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 NT5C2P49902 561 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 SHROOM1Q2M3G4 852 aaPredicted RBP16.05■□□□□ 0.16
CCDC178-201ENST00000300227 LRRC47Q8N1G4 583 aaKnown RBP16.05■□□□□ 0.16
CCDC178-201ENST00000300227 WASF1Q92558 559 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 SPATA32Q96LK8 384 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 CSRNP1Q96S65 589 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 STK36Q9NRP7 1315 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 KIF28PB7ZC32 967 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 KIF5BP33176 963 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 NBPF9Q3BBW0 867 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 ANKS1AQ92625 1134 aa16.05■□□□□ 0.16
CCDC178-201ENST00000300227 FUT2Q10981 343 aa16.04■□□□□ 0.16
CCDC178-201ENST00000300227 CLIP2Q9UDT6 1046 aa16.04■□□□□ 0.16
CCDC178-201ENST00000300227 CDK5RAP2Q96SN8 1893 aa16.04■□□□□ 0.16
CCDC178-201ENST00000300227 MYH1P12882 1939 aa16.04■□□□□ 0.16
CCDC178-201ENST00000300227 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
CCDC178-201ENST00000300227 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
CCDC178-201ENST00000300227 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
CCDC178-201ENST00000300227 CPVLQ9H3G5 476 aa16.04■□□□□ 0.16
CCDC178-201ENST00000300227 MTMR4Q9NYA4 1195 aa16.04■□□□□ 0.16
CCDC178-201ENST00000300227 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
CCDC178-201ENST00000300227 ENTPD3O75355 529 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 EGFRP00533 1210 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 ILDR2Q71H61 639 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 DDX60LQ5H9U9 1706 aaKnown RBP16.03■□□□□ 0.16
CCDC178-201ENST00000300227 RAD21O60216 631 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 TOP1P11387 765 aaKnown RBP16.03■□□□□ 0.16
CCDC178-201ENST00000300227 GMPSP49915 693 aaPredicted RBP16.03■□□□□ 0.16
CCDC178-201ENST00000300227 CERKLQ49MI3 558 aaPredicted RBP16.03■□□□□ 0.16
CCDC178-201ENST00000300227 USP17L2Q6R6M4 530 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 TMEM87AQ8NBN3 555 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 LEO1Q8WVC0 666 aaPredicted RBP16.03■□□□□ 0.16
CCDC178-201ENST00000300227 USP28Q96RU2 1077 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 SCAND2PQ9GZW5 306 aaPredicted RBP16.03■□□□□ 0.16
CCDC178-201ENST00000300227 EHD4Q9H223 541 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 MYOZ2Q9NPC6 264 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 WNT10BO00744 389 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 MYO1BO43795 1136 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 GDF11O95390 407 aa16.03■□□□□ 0.16
CCDC178-201ENST00000300227 MBD3O95983 291 aa16.02■□□□□ 0.16
CCDC178-201ENST00000300227 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
CCDC178-201ENST00000300227 CDAN1Q8IWY9 1227 aa16.02■□□□□ 0.16
CCDC178-201ENST00000300227 CFAP45Q9UL16 551 aa16.02■□□□□ 0.16
CCDC178-201ENST00000300227 CNTNAP5Q8WYK1 1306 aa16.02■□□□□ 0.15
CCDC178-201ENST00000300227 GOLGA6L4A6NEF3 574 aa16.02■□□□□ 0.15
CCDC178-201ENST00000300227 UBE2HP62256 183 aa16.02■□□□□ 0.15
CCDC178-201ENST00000300227 GRM4Q14833 912 aa16.02■□□□□ 0.15
CCDC178-201ENST00000300227 PKN1Q16512 942 aa16.02■□□□□ 0.15
CCDC178-201ENST00000300227 SAMD7Q7Z3H4 446 aa16.02■□□□□ 0.15
CCDC178-201ENST00000300227 FOXP4Q8IVH2 680 aaPredicted RBP16.02■□□□□ 0.15
CCDC178-201ENST00000300227 TMEM39BQ9GZU3 492 aa16.02■□□□□ 0.15
CCDC178-201ENST00000300227 ISY1Q9ULR0 285 aaKnown RBP16.02■□□□□ 0.15
CCDC178-201ENST00000300227 LTBP3Q9NS15 1303 aa16.02■□□□□ 0.15
CCDC178-201ENST00000300227 BTBD18B2RXH4 712 aa16.01■□□□□ 0.15
CCDC178-201ENST00000300227 PRPF3O43395 683 aaKnown RBP16.01■□□□□ 0.15
CCDC178-201ENST00000300227 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
CCDC178-201ENST00000300227 VEGFAP15692 232 aaPredicted RBP16.01■□□□□ 0.15
CCDC178-201ENST00000300227 SAFBQ15424 915 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC178-201ENST00000300227 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms