RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 HMX1Q9NP08 348 aaPredicted RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 DDX4Q9NQI0 724 aaKnown RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 LRP2BPQ9P2M1 347 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 PGAP2Q9UHJ9 254 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 MYH4Q9Y623 1939 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 A0A0D9SFI3 127 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 CLRN2A0PK11 232 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 IQCA1LA6NCM1 817 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 RNF113AO15541 343 aaKnown RBP7.13□□□□□ -1.27
SSX3-201ENST00000298396 WDHD1O75717 1129 aaPredicted RBP7.13□□□□□ -1.27
SSX3-201ENST00000298396 CCNYL3P0C7X3 344 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 CYP7A1P22680 504 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 BTDP43251 543 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 NFIAQ12857 509 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 NMIQ13287 307 aaPredicted RBP7.13□□□□□ -1.27
SSX3-201ENST00000298396 TTF1Q15361 905 aaPredicted RBP7.13□□□□□ -1.27
SSX3-201ENST00000298396 UBE3CQ15386 1083 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 DLGAP5Q15398 846 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 EAPPQ56P03 285 aaPredicted RBP7.13□□□□□ -1.27
SSX3-201ENST00000298396 ZMYM1Q5SVZ6 1142 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 SLC9C2Q5TAH2 1124 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 NAA16Q6N069 864 aaPredicted RBP7.13□□□□□ -1.27
SSX3-201ENST00000298396 USP50Q70EL3 339 aaPredicted RBP7.13□□□□□ -1.27
SSX3-201ENST00000298396 ZFPM1Q8IX07 1006 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 LCORLQ8N3X6 602 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 ANKLE1Q8NAG6 615 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 MIGA1Q8NAN2 632 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 SH3RF3Q8TEJ3 882 aaPredicted RBP7.13□□□□□ -1.27
SSX3-201ENST00000298396 LRRN4Q8WUT4 740 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 EVI5LQ96CN4 794 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 FAM227BQ96M60 508 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 FSD1Q9BTV5 496 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 EVA1BQ9NVM1 165 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 GGA3Q9NZ52 723 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 ZNF70Q9UC06 446 aaPredicted RBP7.13□□□□□ -1.27
SSX3-201ENST00000298396 HDAC9Q9UKV0 1011 aa7.13□□□□□ -1.27
SSX3-201ENST00000298396 ADM5C9JUS6 153 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 RNF223E7ERA6 249 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 SMIM22K7EJ46 135 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 PRKAB2O43741 272 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 SLURP2P0DP57 97 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 MMP14P50281 582 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 RBM5P52756 815 aaKnown RBP eCLIP7.12□□□□□ -1.27
SSX3-201ENST00000298396 MAP3K12Q12852 859 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 BMP2KLQ5H9B9 411 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 ANGEL2Q5VTE6 544 aaKnown RBP7.12□□□□□ -1.27
SSX3-201ENST00000298396 MAP1SQ66K74 1059 aaPredicted RBP7.12□□□□□ -1.27
SSX3-201ENST00000298396 CCDC129Q6ZRS4 1044 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 SH3BP5LQ7L8J4 393 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 ZNF589Q86UQ0 364 aaPredicted RBP7.12□□□□□ -1.27
SSX3-201ENST00000298396 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 RILPL2Q969X0 211 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 TEPSINQ96N21 525 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 NUDT12Q9BQG2 462 aa7.12□□□□□ -1.27
SSX3-201ENST00000298396 GLIS2Q9BZE0 524 aaPredicted RBP7.12□□□□□ -1.27
SSX3-201ENST00000298396 AATFQ9NY61 560 aaKnown RBP eCLIP7.12□□□□□ -1.27
SSX3-201ENST00000298396 MKRN1Q9UHC7 482 aaKnown RBP7.12□□□□□ -1.27
SSX3-201ENST00000298396 COL2A1P02458 1487 aaPredicted RBP7.11□□□□□ -1.27
SSX3-201ENST00000298396 ATRNL1Q5VV63 1379 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 RPAP1Q9BWH6 1393 aaPredicted RBP7.11□□□□□ -1.27
SSX3-201ENST00000298396 PITPNM2Q9BZ72 1349 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 TRAF5O00463 557 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 IGSF3O75054 1194 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 MBD4O95243 580 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 CHMLP26374 656 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 GSTO1P78417 241 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 KCNH2Q12809 1159 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 PNMA8AQ86V59 439 aaPredicted RBP7.11□□□□□ -1.27
SSX3-201ENST00000298396 LDHDQ86WU2 507 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 CNTROBQ8N137 903 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 APPBP2Q92624 585 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 STRBPQ96SI9 672 aaKnown RBP7.11□□□□□ -1.27
SSX3-201ENST00000298396 IDI2Q9BXS1 227 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 TMEM39BQ9GZU3 492 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 ARMT1Q9H993 441 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 EPB41L4AQ9HCS5 686 aaPredicted RBP7.11□□□□□ -1.27
SSX3-201ENST00000298396 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.11□□□□□ -1.27
SSX3-201ENST00000298396 USP40Q9NVE5 1235 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 PLA2G2EQ9NZK7 142 aa7.11□□□□□ -1.27
SSX3-201ENST00000298396 FLT1P17948 1338 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 PASKQ96RG2 1323 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 MAGEB6P1A0A0J9YX57 407 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 A6NJR5 290 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 GSG1L2A8MUP6 293 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 TCP10L2B9ZVM9 353 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 GPAA1O43292 621 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 LDHCP07864 332 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 ZFYP08048 801 aaPredicted RBP7.1□□□□□ -1.27
SSX3-201ENST00000298396 GGCXP38435 758 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 VPS53Q5VIR6 699 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 FKBP1CQ5VVH2 108 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 PRAMEF18Q5VWM3 479 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 PPP1R18Q6NYC8 613 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 TMED8Q6PL24 325 aaPredicted RBP7.1□□□□□ -1.27
SSX3-201ENST00000298396 USP48Q86UV5 1035 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 TEX11Q8IYF3 940 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 SDR42E1Q8WUS8 393 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.1□□□□□ -1.274e-6■■■□□ 18.8
SSX3-201ENST00000298396 VEZTQ9HBM0 779 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 FCF1Q9Y324 198 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms