RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 F13A1P00488 732 aa7.68□□□□□ -1.18
TMC1-201ENST00000297784 YBX3P16989 372 aaKnown RBP eCLIP7.68□□□□□ -1.18
TMC1-201ENST00000297784 USP5P45974 858 aa7.68□□□□□ -1.18
TMC1-201ENST00000297784 CACNB3P54284 484 aa7.68□□□□□ -1.18
TMC1-201ENST00000297784 ANKRD1Q15327 319 aa7.68□□□□□ -1.18
TMC1-201ENST00000297784 CCDC186Q7Z3E2 898 aa7.68□□□□□ -1.18
TMC1-201ENST00000297784 SLF2Q8IX21 1173 aa7.68□□□□□ -1.18
TMC1-201ENST00000297784 TEX11Q8IYF3 940 aa7.68□□□□□ -1.18
TMC1-201ENST00000297784 SLC44A5Q8NCS7 719 aa7.68□□□□□ -1.18
TMC1-201ENST00000297784 C16orf45Q96MC5 204 aaPredicted RBP7.68□□□□□ -1.18
TMC1-201ENST00000297784 USP40Q9NVE5 1235 aa7.68□□□□□ -1.18
TMC1-201ENST00000297784 FAM198AQ9UFP1 575 aa7.68□□□□□ -1.18
TMC1-201ENST00000297784 NMT2O60551 498 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 EGFRP00533 1210 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 SEC23AQ15436 765 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 CEP135Q66GS9 1140 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 SH3BP5LQ7L8J4 393 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 GTF3C6Q969F1 213 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 EFCC1Q9HA90 598 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 STX6O43752 255 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 PFKFB2O60825 505 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 CERS3Q8IU89 383 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 NIM1KQ8IY84 436 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 ZNF274Q96GC6 653 aaPredicted RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 ZSCAN31Q96LW9 406 aaPredicted RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 KRT23Q9C075 422 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 SH2B1Q9NRF2 756 aaPredicted RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 IL17RBQ9NRM6 502 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 FEZ2Q9UHY8 353 aaPredicted RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 GREB1LQ9C091 1923 aaPredicted RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 ORC4O43929 436 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 ZNF75DP51815 510 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 GABPAQ06546 454 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 TRDNQ13061 729 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 PICALMQ13492 652 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 BMS1Q14692 1282 aaKnown RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 NAA30Q147X3 362 aaPredicted RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 CFAP100Q494V2 611 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 MUM1L1Q5H9M0 696 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 FAM47AQ5JRC9 791 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 RRP12Q5JTH9 1297 aaKnown RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 RALYLQ86SE5 291 aaKnown RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 ZBED3Q96IU2 234 aaPredicted RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 YY1AP1Q9H869 796 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 CNNM2Q9H8M5 875 aa7.67□□□□□ -1.18
TMC1-201ENST00000297784 NCOA5Q9HCD5 579 aaKnown RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 FAM217BQ9NTX9 383 aaPredicted RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 ANGEL1Q9UNK9 670 aaKnown RBP7.67□□□□□ -1.18
TMC1-201ENST00000297784 PLCG2P16885 1265 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 FBXO38Q6PIJ6 1188 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 RBM43Q6ZSC3 357 aaKnown RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 SGMS1Q86VZ5 419 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 IDI2Q9BXS1 227 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 TDRD3Q9H7E2 651 aaKnown RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 MRVI1Q9Y6F6 885 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 ELP1O95163 1332 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 DDTLA6NHG4 134 aaPredicted RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 SPDYE2BA6NHP3 402 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 KIF2AO00139 706 aaPredicted RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 JAK2O60674 1132 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 SPDYE6P0CI01 402 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 H2AFXP16104 143 aaPredicted RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 SYT1P21579 422 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 LIFRP42702 1097 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 CCT2P78371 535 aaKnown RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 IRX3P78415 501 aaPredicted RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 TPD52L1Q16890 204 aaPredicted RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 RCSD1Q6JBY9 416 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 C16orf86Q6ZW13 317 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 RAB11FIP4Q86YS3 637 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 PLCD3Q8N3E9 789 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 ENAHQ8N8S7 591 aaPredicted RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 AGBL3Q8NEM8 1001 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 NOL10Q9BSC4 688 aaKnown RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 OSBPL5Q9H0X9 879 aaPredicted RBP7.66□□□□□ -1.18
TMC1-201ENST00000297784 DNAJC18Q9H819 358 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 PCNTO95613 3336 aa7.66□□□□□ -1.18
TMC1-201ENST00000297784 MYO3BQ8WXR4 1341 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 ZNF541Q9H0D2 1346 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 PPFIA3O75145 1194 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 CAVIN2O95810 425 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 RXRAP19793 462 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 CDC27P30260 824 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 TYRO3Q06418 890 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 LRMPQ12912 555 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 MAP3K11Q16584 847 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 TMEM87BQ96K49 555 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.65□□□□□ -1.18
TMC1-201ENST00000297784 RNF41Q9H4P4 317 aaPredicted RBP7.65□□□□□ -1.18
TMC1-201ENST00000297784 ZNF215Q9UL58 517 aaPredicted RBP7.65□□□□□ -1.18
TMC1-201ENST00000297784 KLF18A0A0U1RQI7 1052 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 PCP11498 1178 aaKnown RBP7.65□□□□□ -1.18
TMC1-201ENST00000297784 FDPSP14324 419 aaKnown RBP7.65□□□□□ -1.18
TMC1-201ENST00000297784 RASA1P20936 1047 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 GJB2P29033 226 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 CDK8P49336 464 aa7.65□□□□□ -1.18
TMC1-201ENST00000297784 RBM5P52756 815 aaKnown RBP eCLIP7.65□□□□□ -1.18
TMC1-201ENST00000297784 FOXD4L6Q3SYB3 417 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms