RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 TNS2Q63HR2 1409 aa16.77■□□□□ 0.28
SPIDR-201ENST00000297423 GOLGA6BA6NDN3 693 aa16.77■□□□□ 0.28
SPIDR-201ENST00000297423 UBE2Q2LH0YL09 131 aa16.77■□□□□ 0.28
SPIDR-201ENST00000297423 ZPR1O75312 459 aa16.77■□□□□ 0.28
SPIDR-201ENST00000297423 GGCXP38435 758 aa16.77■□□□□ 0.28
SPIDR-201ENST00000297423 KIF23Q02241 960 aaPredicted RBP16.77■□□□□ 0.28
SPIDR-201ENST00000297423 SHC4Q6S5L8 630 aa16.77■□□□□ 0.28
SPIDR-201ENST00000297423 RSRC2Q7L4I2 434 aaKnown RBP16.77■□□□□ 0.28
SPIDR-201ENST00000297423 TRMT112Q9UI30 125 aaKnown RBP16.77■□□□□ 0.28
SPIDR-201ENST00000297423 ABL1P00519 1130 aa16.77■□□□□ 0.28
SPIDR-201ENST00000297423 ERCC3P19447 782 aa16.77■□□□□ 0.28
SPIDR-201ENST00000297423 RNASE9P60153 205 aaKnown RBP16.77■□□□□ 0.28
SPIDR-201ENST00000297423 LRP10Q7Z4F1 713 aa16.77■□□□□ 0.28
SPIDR-201ENST00000297423 EFCAB13Q8IY85 973 aa16.77■□□□□ 0.28
SPIDR-201ENST00000297423 A0A087WUV0 522 aaPredicted RBP16.77■□□□□ 0.27
SPIDR-201ENST00000297423 SLC39A14Q15043 492 aa16.77■□□□□ 0.27
SPIDR-201ENST00000297423 ENOX2Q16206 610 aaKnown RBP16.77■□□□□ 0.27
SPIDR-201ENST00000297423 KLHL34Q8N239 644 aa16.77■□□□□ 0.27
SPIDR-201ENST00000297423 POLR3EQ9NVU0 708 aa16.77■□□□□ 0.27
SPIDR-201ENST00000297423 LOC102724428A0A0B4J2F2 783 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 ATP5JP18859 108 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 SIK1P57059 783 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 VPS72Q15906 364 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 RRAGBQ5VZM2 374 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 KRI1Q8N9T8 703 aaKnown RBP16.76■□□□□ 0.27
SPIDR-201ENST00000297423 MAN1B1Q9UKM7 699 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 ADGRG1Q9Y653 693 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 MAP3K15Q6ZN16 1313 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 BTBD18B2RXH4 712 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 B4E1Z4 1266 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 CYP19A1P11511 503 aaPredicted RBP16.76■□□□□ 0.27
SPIDR-201ENST00000297423 CORO7P57737 925 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 SLC9C2Q5TAH2 1124 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 IL17RAQ96F46 866 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 FAM89AQ96GI7 184 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 BLZF1Q9H2G9 400 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 CXorf56Q9H5V9 222 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 CTNND2Q9UQB3 1225 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 BCL9O00512 1426 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
SPIDR-201ENST00000297423 KCNB2Q92953 911 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 BRMS1Q9HCU9 246 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 CCDC87Q9NVE4 849 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 L1RE1Q9UN81 338 aa16.76■□□□□ 0.27
SPIDR-201ENST00000297423 DISP2A7MBM2 1401 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 ADAMTS7Q9UKP4 1686 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 SPATA31A6Q5VVP1 1343 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 TEX2Q8IWB9 1127 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 H7C1W4 665 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 ANKRD18AQ8IVF6 992 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 AIDAQ96BJ3 306 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 CEP126Q9P2H0 1117 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 IFIT3O14879 490 aaKnown RBP16.75■□□□□ 0.27
SPIDR-201ENST00000297423 UBXN1Q04323 297 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 IFT81Q8WYA0 676 aa16.75■□□□□ 0.27
SPIDR-201ENST00000297423 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.75■□□□□ 0.27
SPIDR-201ENST00000297423 HPDP32754 393 aaPredicted RBP16.74■□□□□ 0.27
SPIDR-201ENST00000297423 SLC7A5Q01650 507 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 ODF2Q5BJF6 829 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 TMEM67Q5HYA8 995 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
SPIDR-201ENST00000297423 FCHSD1Q86WN1 690 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 ZNF274Q96GC6 653 aaPredicted RBP16.74■□□□□ 0.27
SPIDR-201ENST00000297423 SIPA1L3O60292 1781 aaPredicted RBP16.74■□□□□ 0.27
SPIDR-201ENST00000297423 CAPS2Q9BXY5 557 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 CABP5Q9NP86 173 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 INCENPQ9NQS7 918 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 IL6STP40189 918 aaPredicted RBP16.74■□□□□ 0.27
SPIDR-201ENST00000297423 GRIN1Q05586 938 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 FOXP4Q8IVH2 680 aaPredicted RBP16.74■□□□□ 0.27
SPIDR-201ENST00000297423 PLIN2Q99541 437 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 KAT14Q9H8E8 782 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 COPRSQ9NQ92 184 aa16.74■□□□□ 0.27
SPIDR-201ENST00000297423 GEMIN8Q9NWZ8 242 aaKnown RBP16.74■□□□□ 0.27
SPIDR-201ENST00000297423 RNF113AO15541 343 aaKnown RBP16.73■□□□□ 0.27
SPIDR-201ENST00000297423 ZBTB43O43298 467 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 CDKL5O76039 1030 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 ACTN3Q08043 901 aaPredicted RBP16.73■□□□□ 0.27
SPIDR-201ENST00000297423 IFIT5Q13325 482 aaKnown RBP16.73■□□□□ 0.27
SPIDR-201ENST00000297423 PDCLQ13371 301 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 TRIM22Q8IYM9 498 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 DENND2AQ9ULE3 1009 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 NF2P35240 595 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 SSRP1Q08945 709 aaKnown RBP16.73■□□□□ 0.27
SPIDR-201ENST00000297423 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.73■□□□□ 0.27
SPIDR-201ENST00000297423 KCNQ2O43526 872 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 FGAP02671 866 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 PI16Q6UXB8 463 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 KIFC2Q96AC6 838 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 MED4Q9NPJ6 270 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 PSD3Q9NYI0 1048 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 SLC12A7Q9Y666 1083 aa16.73■□□□□ 0.27
SPIDR-201ENST00000297423 IDEP14735 1019 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 HSPA1LP34931 641 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 C2orf54Q08AI8 447 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 E2F5Q15329 346 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 ZNHIT6Q9NWK9 470 aaKnown RBP16.72■□□□□ 0.27
SPIDR-201ENST00000297423 M0R2C6 588 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms