RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 BRAPQ7Z569 592 aa24.73■■□□□ 1.55
SOX17-201ENST00000297316 LARGE2Q8N3Y3 721 aa24.73■■□□□ 1.55
SOX17-201ENST00000297316 PSMD1Q99460 953 aa24.73■■□□□ 1.55
SOX17-201ENST00000297316 PSME4Q14997 1843 aa24.73■■□□□ 1.55
SOX17-201ENST00000297316 FUT2Q10981 343 aa24.72■■□□□ 1.55
SOX17-201ENST00000297316 CLSTN2Q9H4D0 955 aa24.72■■□□□ 1.55
SOX17-201ENST00000297316 PIM2Q9P1W9 311 aa24.72■■□□□ 1.55
SOX17-201ENST00000297316 MYH8P13535 1937 aa24.72■■□□□ 1.55
SOX17-201ENST00000297316 CKAP2LQ8IYA6 745 aa24.72■■□□□ 1.55
SOX17-201ENST00000297316 LINC00301Q8NCQ3 95 aa24.72■■□□□ 1.55
SOX17-201ENST00000297316 ANP32BQ92688 251 aaKnown RBP24.72■■□□□ 1.55
SOX17-201ENST00000297316 DDX19AQ9NUU7 478 aaKnown RBP24.72■■□□□ 1.55
SOX17-201ENST00000297316 DDAH1O94760 285 aa24.71■■□□□ 1.55
SOX17-201ENST00000297316 TCP10Q12799 353 aa24.71■■□□□ 1.55
SOX17-201ENST00000297316 CCAR1Q8IX12 1150 aaKnown RBP24.71■■□□□ 1.55
SOX17-201ENST00000297316 TRIM22Q8IYM9 498 aa24.71■■□□□ 1.55
SOX17-201ENST00000297316 OSBPL5Q9H0X9 879 aaPredicted RBP24.71■■□□□ 1.55
SOX17-201ENST00000297316 MTMR7Q9Y216 660 aa24.71■■□□□ 1.55
SOX17-201ENST00000297316 BRCA1P38398 1863 aaKnown RBP24.71■■□□□ 1.55
SOX17-201ENST00000297316 TGFB2P61812 414 aa24.7■■□□□ 1.55
SOX17-201ENST00000297316 MAP3K11Q16584 847 aa24.7■■□□□ 1.55
SOX17-201ENST00000297316 PDLIM2Q96JY6 352 aa24.7■■□□□ 1.55
SOX17-201ENST00000297316 PCDHA7Q9UN72 937 aa24.7■■□□□ 1.55
SOX17-201ENST00000297316 STX8Q9UNK0 236 aa24.7■■□□□ 1.55
SOX17-201ENST00000297316 KCNJ14Q9UNX9 436 aa24.7■■□□□ 1.55
SOX17-201ENST00000297316 ME1P48163 572 aa24.7■■□□□ 1.54
SOX17-201ENST00000297316 RGS22Q8NE09 1264 aa24.7■■□□□ 1.54
SOX17-201ENST00000297316 SHISA4Q96DD7 197 aa24.7■■□□□ 1.54
SOX17-201ENST00000297316 TNMDQ9H2S6 317 aa24.7■■□□□ 1.54
SOX17-201ENST00000297316 KAT14Q9H8E8 782 aa24.7■■□□□ 1.54
SOX17-201ENST00000297316 GABPAQ06546 454 aa24.69■■□□□ 1.54
SOX17-201ENST00000297316 RASGRP2Q7LDG7 609 aa24.69■■□□□ 1.54
SOX17-201ENST00000297316 DGKHQ86XP1 1220 aa24.69■■□□□ 1.54
SOX17-201ENST00000297316 SRBD1Q8N5C6 995 aaKnown RBP24.69■■□□□ 1.54
SOX17-201ENST00000297316 PNMA1Q8ND90 353 aa24.69■■□□□ 1.54
SOX17-201ENST00000297316 PSMD14O00487 310 aa24.69■■□□□ 1.54
SOX17-201ENST00000297316 RBM43Q6ZSC3 357 aaKnown RBP24.69■■□□□ 1.54
SOX17-201ENST00000297316 UPF1Q92900 1129 aaKnown RBP eCLIP24.69■■□□□ 1.54
SOX17-201ENST00000297316 POLR3EQ9NVU0 708 aa24.69■■□□□ 1.54
SOX17-201ENST00000297316 DEXIO95424 95 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 CALM1P0DP23 149 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 CALM2P0DP24 149 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 CALM3P0DP25 149 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 CLCN1P35523 988 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 TMTC3Q6ZXV5 915 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 TCP11L1Q9NUJ3 509 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 ZBTB12Q9Y330 459 aaPredicted RBP24.68■■□□□ 1.54
SOX17-201ENST00000297316 V9GY48 417 aaPredicted RBP24.68■■□□□ 1.54
SOX17-201ENST00000297316 SNW1Q13573 536 aaKnown RBP24.68■■□□□ 1.54
SOX17-201ENST00000297316 PKN1Q16512 942 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 CTCFLQ8NI51 663 aaPredicted RBP24.68■■□□□ 1.54
SOX17-201ENST00000297316 TMEM47Q9BQJ4 181 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 MRIQ9BWK5 157 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 ZNF287Q9HBT7 754 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 SERPINA10Q9UK55 444 aa24.68■■□□□ 1.54
SOX17-201ENST00000297316 TRIM29Q14134 588 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 PPP2R5BQ15173 497 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 STK38Q15208 465 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 GRIPAP1Q4V328 841 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 PIBF1Q8WXW3 757 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 ANKS1AQ92625 1134 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 SGIP1Q9BQI5 828 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 TDRD3Q9H7E2 651 aaKnown RBP24.67■■□□□ 1.54
SOX17-201ENST00000297316 RBM28Q9NW13 759 aaKnown RBP24.67■■□□□ 1.54
SOX17-201ENST00000297316 FAM198AQ9UFP1 575 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 HDLBPQ00341 1268 aaKnown RBP24.67■■□□□ 1.54
SOX17-201ENST00000297316 CFAP100Q494V2 611 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 DALRD3Q5D0E6 543 aaKnown RBP24.67■■□□□ 1.54
SOX17-201ENST00000297316 ANO1Q5XXA6 986 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 STAG2Q8N3U4 1231 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 NEDD1Q8NHV4 660 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 CEP95Q96GE4 821 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 PRMT6Q96LA8 375 aaPredicted RBP24.67■■□□□ 1.54
SOX17-201ENST00000297316 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.67■■□□□ 1.54
SOX17-201ENST00000297316 RNF26Q9BY78 433 aaPredicted RBP24.67■■□□□ 1.54
SOX17-201ENST00000297316 SIPA1L1O43166 1804 aa24.67■■□□□ 1.54
SOX17-201ENST00000297316 YEATS4O95619 227 aa24.66■■□□□ 1.54
SOX17-201ENST00000297316 U2AF2P26368 475 aaKnown RBP eCLIP24.66■■□□□ 1.54
SOX17-201ENST00000297316 CLEC10AQ8IUN9 316 aa24.66■■□□□ 1.54
SOX17-201ENST00000297316 ENGASEQ8NFI3 743 aa24.66■■□□□ 1.54
SOX17-201ENST00000297316 CNTNAP5Q8WYK1 1306 aa24.66■■□□□ 1.54
SOX17-201ENST00000297316 FAM196BA6NMK8 535 aa24.66■■□□□ 1.54
SOX17-201ENST00000297316 FSIP1Q8NA03 581 aa24.66■■□□□ 1.54
SOX17-201ENST00000297316 WASF1Q92558 559 aa24.66■■□□□ 1.54
SOX17-201ENST00000297316 SERPINB13Q9UIV8 391 aa24.66■■□□□ 1.54
SOX17-201ENST00000297316 MRVI1Q9Y6F6 885 aa24.66■■□□□ 1.54
SOX17-201ENST00000297316 DDTLA6NHG4 134 aaPredicted RBP24.65■■□□□ 1.54
SOX17-201ENST00000297316 CCDC192P0DO97 292 aa24.65■■□□□ 1.54
SOX17-201ENST00000297316 AKR1B1P15121 316 aa24.65■■□□□ 1.54
SOX17-201ENST00000297316 VEGFAP15692 232 aaPredicted RBP24.65■■□□□ 1.54
SOX17-201ENST00000297316 TYRO3Q06418 890 aa24.65■■□□□ 1.54
SOX17-201ENST00000297316 RSBN1LQ6PCB5 846 aaPredicted RBP24.65■■□□□ 1.54
SOX17-201ENST00000297316 TRIM44Q96DX7 344 aaPredicted RBP24.65■■□□□ 1.54
SOX17-201ENST00000297316 VPS54Q9P1Q0 977 aa24.65■■□□□ 1.54
SOX17-201ENST00000297316 FER1L6Q2WGJ9 1857 aa24.65■■□□□ 1.54
SOX17-201ENST00000297316 BTBD18B2RXH4 712 aa24.64■■□□□ 1.54
SOX17-201ENST00000297316 SPTLC2O15270 562 aa24.64■■□□□ 1.54
SOX17-201ENST00000297316 SH3BP5LQ7L8J4 393 aa24.64■■□□□ 1.54
SOX17-201ENST00000297316 PRPF3O43395 683 aaKnown RBP24.64■■□□□ 1.53
SOX17-201ENST00000297316 MMP1P03956 469 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms