RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 KCNG4Q8TDN1 519 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 OXER1Q8TDS5 423 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 FBXW7Q969H0 707 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 TMX4Q9H1E5 349 aaPredicted RBP15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 ZNF219Q9P2Y4 722 aaPredicted RBP15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 NOVP48745 357 aa15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 NR5A1Q13285 461 aa15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 STK38Q15208 465 aa15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 MAP3K11Q16584 847 aa15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 SLC35G1Q2M3R5 365 aa15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 DACT2Q5SW24 774 aa15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 FMR1NBQ8N0W7 255 aaPredicted RBP15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 ZNF444Q8N0Y2 327 aaPredicted RBP15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 PHF20Q9BVI0 1012 aa15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 TNMDQ9H2S6 317 aa15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 FOXP1Q9H334 677 aaPredicted RBP15.72■□□□□ 0.11
CHMP4C-201ENST00000297265 TSPY3P0CV98 308 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 TSPY8P0CW00 308 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 STRIP1Q5VSL9 837 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 AMOTL1Q8IY63 956 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 CKAP2LQ8IYA6 745 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 PNMA1Q8ND90 353 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 PCDHAC2Q9Y5I4 1007 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 C10orf71Q711Q0 1435 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 KCNA3P22001 575 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 FKBP1AP62942 108 aaKnown RBP15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 FAM160A1Q05DH4 1040 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 CCDC173Q0VFZ6 552 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 CDC42EP5Q6NZY7 148 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 STAG2Q8N3U4 1231 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 NEDD1Q8NHV4 660 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 TMEM47Q9BQJ4 181 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 MRIQ9BWK5 157 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 VPS54Q9P1Q0 977 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 MAD2L2Q9UI95 211 aa15.71■□□□□ 0.11
CHMP4C-201ENST00000297265 A0A1B0GVL5 298 aa15.7■□□□□ 0.1
CHMP4C-201ENST00000297265 ECE2O60344 883 aa15.7■□□□□ 0.1
CHMP4C-201ENST00000297265 BAG6P46379 1132 aa15.7■□□□□ 0.1
CHMP4C-201ENST00000297265 FSIP1Q8NA03 581 aa15.7■□□□□ 0.1
CHMP4C-201ENST00000297265 CTCFLQ8NI51 663 aaPredicted RBP15.7■□□□□ 0.1
CHMP4C-201ENST00000297265 KAT14Q9H8E8 782 aa15.7■□□□□ 0.1
CHMP4C-201ENST00000297265 MRVI1Q9Y6F6 885 aa15.7■□□□□ 0.1
CHMP4C-201ENST00000297265 PPP6R2O75170 966 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 MARCKSP29966 332 aaPredicted RBP15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 NDUFA8P51970 172 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 TYRO3Q06418 890 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 KIAA2012Q0VF49 1180 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 PICALMQ13492 652 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 AOC3Q16853 763 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 EARS2Q5JPH6 523 aaKnown RBP15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 MRPS27Q92552 414 aaKnown RBP15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 ZDHHC15Q96MV8 337 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 USP40Q9NVE5 1235 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 G3V3G9 751 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 CCDC192P0DO97 292 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 CRKP46108 304 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 NFIAQ12857 509 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 GRM4Q14833 912 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 UVSSAQ2YD98 709 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 CCDC178Q5BJE1 867 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 DCAF8Q5TAQ9 597 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 TNFRSF25Q93038 417 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 TEKT1Q969V4 418 aa15.69■□□□□ 0.1
CHMP4C-201ENST00000297265 YDJCA8MPS7 323 aa15.68■□□□□ 0.1
CHMP4C-201ENST00000297265 ADAMTS3O15072 1205 aa15.68■□□□□ 0.1
CHMP4C-201ENST00000297265 CYTH3O43739 400 aa15.68■□□□□ 0.1
CHMP4C-201ENST00000297265 C21orf2O43822 256 aa15.68■□□□□ 0.1
CHMP4C-201ENST00000297265 CMA1P23946 247 aa15.68■□□□□ 0.1
CHMP4C-201ENST00000297265 GNL2Q13823 731 aaKnown RBP15.68■□□□□ 0.1
CHMP4C-201ENST00000297265 KIAA0825Q8IV33 1275 aa15.68■□□□□ 0.1
CHMP4C-201ENST00000297265 ZFPM1Q8IX07 1006 aa15.68■□□□□ 0.1
CHMP4C-201ENST00000297265 ZNF287Q9HBT7 754 aa15.68■□□□□ 0.1
CHMP4C-201ENST00000297265 PALM3A6NDB9 673 aaPredicted RBP15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 FAM205CA6NFA0 338 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 AKAP17AQ02040 695 aaKnown RBP15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 SAFBQ15424 915 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 PFKFB3Q16875 520 aaPredicted RBP15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 NOM1Q5C9Z4 860 aaKnown RBP15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 CC2D2BQ6DHV5 1058 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 SHC4Q6S5L8 630 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 CCDC73Q6ZRK6 1079 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 RASGRP2Q7LDG7 609 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 CEP95Q96GE4 821 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 OSBPL5Q9H0X9 879 aaPredicted RBP15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 STX8Q9UNK0 236 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 PCDHB6Q9Y5E3 794 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 FAM237AA0A1B0GTK4 181 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 SLURP2P0DP57 97 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 KIF5BP33176 963 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 RILPL1Q5EBL4 403 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 HPSEQ9Y251 543 aa15.67■□□□□ 0.1
CHMP4C-201ENST00000297265 SIPA1L1O43166 1804 aa15.66■□□□□ 0.1
CHMP4C-201ENST00000297265 PLIN4Q96Q06 1357 aa15.66■□□□□ 0.1
CHMP4C-201ENST00000297265 IGKV6D-41A0A0C4DH26 115 aa15.66■□□□□ 0.1
CHMP4C-201ENST00000297265 WNT7AO00755 349 aa15.66■□□□□ 0.1
CHMP4C-201ENST00000297265 AP5Z1O43299 807 aa15.66■□□□□ 0.1
CHMP4C-201ENST00000297265 SCG2P13521 617 aa15.66■□□□□ 0.1
CHMP4C-201ENST00000297265 HDLBPQ00341 1268 aaKnown RBP15.66■□□□□ 0.1
CHMP4C-201ENST00000297265 CLIC6Q96NY7 704 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms