RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 PDE4BQ07343 736 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 VPS72Q15906 364 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 GLIPR1L2Q4G1C9 344 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 TPTE2Q6XPS3 522 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 USP49Q70CQ1 688 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 TXNRD3Q86VQ6 643 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 AMIGO3Q86WK7 504 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 DPF2Q92785 391 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 NGLY1Q96IV0 654 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 CSRNP2Q9H175 543 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 KCND1Q9NSA2 647 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 JAG2Q9Y219 1238 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 THSD7AQ9UPZ6 1657 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 MYH8P13535 1937 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 CNTNAP5Q8WYK1 1306 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 ORC4O43929 436 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 DDAH1O94760 285 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 FAM47AQ5JRC9 791 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 NT5DC1Q5TFE4 455 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 TMTC3Q6ZXV5 915 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 GRAMD1CQ8IYS0 662 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 CCDC112Q8NEF3 446 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 ATP8A2Q9NTI2 1148 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 FANCLQ9NW38 375 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 MAN1B1Q9UKM7 699 aa10.65□□□□□ -0.7
UBLCP1-201ENST00000296786 TRIM75PA6NK02 468 aa10.65□□□□□ -0.71
UBLCP1-201ENST00000296786 CBFA2T2O43439 604 aa10.65□□□□□ -0.71
UBLCP1-201ENST00000296786 ACTN4O43707 911 aaKnown RBP10.65□□□□□ -0.71
UBLCP1-201ENST00000296786 CYP2D6P10635 497 aa10.65□□□□□ -0.71
UBLCP1-201ENST00000296786 TM4SF1P30408 202 aa10.65□□□□□ -0.71
UBLCP1-201ENST00000296786 CFAP100Q494V2 611 aa10.65□□□□□ -0.71
UBLCP1-201ENST00000296786 UBE2Q2Q8WVN8 375 aa10.65□□□□□ -0.71
UBLCP1-201ENST00000296786 ARPP21Q9UBL0 812 aaPredicted RBP10.65□□□□□ -0.71
UBLCP1-201ENST00000296786 SARSP49591 514 aaKnown RBP10.64□□□□□ -0.71
UBLCP1-201ENST00000296786 NPY5RQ15761 445 aa10.64□□□□□ -0.71
UBLCP1-201ENST00000296786 ZNF827Q17R98 1081 aa10.64□□□□□ -0.71
UBLCP1-201ENST00000296786 FAM182BQ5T319 152 aa10.64□□□□□ -0.71
UBLCP1-201ENST00000296786 E4F1Q66K89 784 aaPredicted RBP10.64□□□□□ -0.71
UBLCP1-201ENST00000296786 SMARCE1Q969G3 411 aa10.64□□□□□ -0.71
UBLCP1-201ENST00000296786 CCNL1Q9UK58 526 aaPredicted RBP10.64□□□□□ -0.71
UBLCP1-201ENST00000296786 RTCBQ9Y3I0 505 aaKnown RBP10.64□□□□□ -0.71
UBLCP1-201ENST00000296786 IRS2Q9Y4H2 1338 aa10.64□□□□□ -0.71
UBLCP1-201ENST00000296786 WNT7AO00755 349 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 MYO1BO43795 1136 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 MORC3Q14149 939 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 DHX8Q14562 1220 aaKnown RBP10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 SLC4A8Q2Y0W8 1093 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 HSP90AA4PQ58FG1 418 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 NOM1Q5C9Z4 860 aaKnown RBP10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 KANK3Q6NY19 840 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 SRBD1Q8N5C6 995 aaKnown RBP10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 CTCFLQ8NI51 663 aaPredicted RBP10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 ANKRD7Q92527 254 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 BRMS1Q9HCU9 246 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 MORC2Q9Y6X9 1032 aaPredicted RBP10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 A0A087X0B3 334 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 TSPY2A6NKD2 308 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 NPHP1O15259 732 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 TOM1O60784 492 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 FMR1Q06787 632 aaKnown RBP eCLIP10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 PTPN21Q16825 1174 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 SBK1Q52WX2 424 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 SLC51AQ86UW1 340 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 DZIP1Q86YF9 867 aaKnown RBP10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 VSTM4Q8IW00 320 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 TNFRSF25Q93038 417 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 EPSTI1Q96J88 318 aa10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 NOL10Q9BSC4 688 aaKnown RBP10.63□□□□□ -0.71
UBLCP1-201ENST00000296786 TMEM232C9JQI7 657 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 NRDCO43847 1150 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 KCNJ6P48051 423 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 NCBP1Q09161 790 aaKnown RBP10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 TRIML1Q8N9V2 468 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 MLKLQ8NB16 471 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 SPATA20Q8TB22 786 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 DHX58Q96C10 678 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 MCM9Q9NXL9 1143 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 DACH1Q9UI36 760 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 UBR3Q6ZT12 1888 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 PSDA5PKW4 1024 aaPredicted RBP10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 USP17L8P0C7I0 530 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 ZNF174Q15697 407 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 RCSD1Q6JBY9 416 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 TRMT44Q8IYL2 757 aaKnown RBP10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 SYMPKQ92797 1274 aaKnown RBP10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 PPP1R13BQ96KQ4 1090 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 INTS13Q9NVM9 706 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 ANKIB1Q9P2G1 1089 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 NFE2L3Q9Y4A8 694 aa10.62□□□□□ -0.71
UBLCP1-201ENST00000296786 BMP15O95972 392 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 TOP1P11387 765 aaKnown RBP10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 SCG2P13521 617 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 SYCP1Q15431 976 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 TTC38Q5R3I4 469 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 SPTY2D1Q68D10 685 aaPredicted RBP10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 TMED8Q6PL24 325 aaPredicted RBP10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 PDCL2Q8N4E4 241 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 FERMT2Q96AC1 680 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 CCDC94Q9BW85 323 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms