RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 NAV1Q8NEY1 1877 aa23.79■■□□□ 1.4
CXCL3-201ENST00000296026 POTEEQ6S8J3 1075 aa23.78■■□□□ 1.4
CXCL3-201ENST00000296026 SOCS4Q8WXH5 440 aa23.78■■□□□ 1.4
CXCL3-201ENST00000296026 PORCNQ9H237 461 aa23.78■■□□□ 1.4
CXCL3-201ENST00000296026 CEP290O15078 2479 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 USP17L15C9J2P7 530 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 USP17L13C9JLJ4 530 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 USP17L11C9JVI0 530 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 USP17L18D6R9N7 530 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 USP17L22D6RA61 530 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 USP17L17D6RBQ6 530 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 USP17L19D6RCP7 530 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 USP17L20D6RJB6 530 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 EVI5O60447 810 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 RAB11FIP3O75154 756 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 USP14P54578 494 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 USP17L24Q0WX57 530 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 PDE3AQ14432 1141 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 ACER1Q8TDN7 264 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 KIAA1683Q9H0B3 1180 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 MCM9Q9NXL9 1143 aa23.77■■□□□ 1.4
CXCL3-201ENST00000296026 RBM27Q9P2N5 1060 aaKnown RBP23.77■■□□□ 1.4
CXCL3-201ENST00000296026 XRCC5P13010 732 aaKnown RBP23.76■■□□□ 1.39
CXCL3-201ENST00000296026 GPR142Q7Z601 462 aa23.76■■□□□ 1.39
CXCL3-201ENST00000296026 NECAB2Q7Z6G3 386 aa23.76■■□□□ 1.39
CXCL3-201ENST00000296026 DIS3LQ8TF46 1054 aaKnown RBP23.76■■□□□ 1.39
CXCL3-201ENST00000296026 EDC3Q96F86 508 aaKnown RBP23.76■■□□□ 1.39
CXCL3-201ENST00000296026 TCRBV5S4A2TA0A5A2 114 aa23.75■■□□□ 1.39
CXCL3-201ENST00000296026 VCAM1P19320 739 aa23.75■■□□□ 1.39
CXCL3-201ENST00000296026 GABPAQ06546 454 aa23.75■■□□□ 1.39
CXCL3-201ENST00000296026 CATSPERGQ6ZRH7 1159 aa23.75■■□□□ 1.39
CXCL3-201ENST00000296026 PLEKHH3Q7Z736 793 aa23.75■■□□□ 1.39
CXCL3-201ENST00000296026 LCORLQ8N3X6 602 aa23.75■■□□□ 1.39
CXCL3-201ENST00000296026 ANKLE1Q8NAG6 615 aa23.75■■□□□ 1.39
CXCL3-201ENST00000296026 SDR42E1Q8WUS8 393 aa23.75■■□□□ 1.39
CXCL3-201ENST00000296026 CHMP4BQ9H444 224 aaKnown RBP23.75■■□□□ 1.39
CXCL3-201ENST00000296026 RABGAP1Q9Y3P9 1069 aa23.75■■□□□ 1.39
CXCL3-201ENST00000296026 PRKAR2AP13861 404 aaKnown RBP23.74■■□□□ 1.39
CXCL3-201ENST00000296026 GUCY1A2P33402 732 aa23.74■■□□□ 1.39
CXCL3-201ENST00000296026 EVX2Q03828 476 aa23.74■■□□□ 1.39
CXCL3-201ENST00000296026 MORN1Q5T089 497 aa23.74■■□□□ 1.39
CXCL3-201ENST00000296026 MAP3K21Q5TCX8 1036 aa23.74■■□□□ 1.39
CXCL3-201ENST00000296026 TRMT44Q8IYL2 757 aaKnown RBP23.74■■□□□ 1.39
CXCL3-201ENST00000296026 USP6NLQ92738 828 aa23.74■■□□□ 1.39
CXCL3-201ENST00000296026 CWC22Q9HCG8 908 aaKnown RBP23.74■■□□□ 1.39
CXCL3-201ENST00000296026 DCP1AQ9NPI6 582 aaPredicted RBP23.74■■□□□ 1.39
CXCL3-201ENST00000296026 RCAN3Q9UKA8 241 aa23.74■■□□□ 1.39
CXCL3-201ENST00000296026 CNMDO75829 334 aa23.73■■□□□ 1.39
CXCL3-201ENST00000296026 ZKSCAN1P17029 563 aaPredicted RBP23.73■■□□□ 1.39
CXCL3-201ENST00000296026 RGS2P41220 211 aa23.73■■□□□ 1.39
CXCL3-201ENST00000296026 SEPT2Q15019 361 aa23.73■■□□□ 1.39
CXCL3-201ENST00000296026 BOLA2Q9H3K6 86 aa23.73■■□□□ 1.39
CXCL3-201ENST00000296026 PAG1Q9NWQ8 432 aa23.73■■□□□ 1.39
CXCL3-201ENST00000296026 MPHOSPH10O00566 681 aaKnown RBP23.72■■□□□ 1.39
CXCL3-201ENST00000296026 CCNA1P78396 465 aa23.72■■□□□ 1.39
CXCL3-201ENST00000296026 PRO3102Q9H379 93 aa23.72■■□□□ 1.39
CXCL3-201ENST00000296026 ARMT1Q9H993 441 aa23.72■■□□□ 1.39
CXCL3-201ENST00000296026 ALPK3Q96L96 1907 aa23.71■■□□□ 1.39
CXCL3-201ENST00000296026 ATP5JP18859 108 aa23.71■■□□□ 1.39
CXCL3-201ENST00000296026 CACNB2Q08289 660 aaPredicted RBP23.71■■□□□ 1.39
CXCL3-201ENST00000296026 CCL14Q16627 93 aa23.71■■□□□ 1.39
CXCL3-201ENST00000296026 SLFNL1Q499Z3 407 aa23.71■■□□□ 1.39
CXCL3-201ENST00000296026 APBA2Q99767 749 aa23.71■■□□□ 1.39
CXCL3-201ENST00000296026 NBPF3Q9H094 633 aa23.71■■□□□ 1.39
CXCL3-201ENST00000296026 RPAP3Q9H6T3 665 aaPredicted RBP23.71■■□□□ 1.39
CXCL3-201ENST00000296026 OGDHLQ9ULD0 1010 aa23.71■■□□□ 1.39
CXCL3-201ENST00000296026 CYP2D6P10635 497 aa23.7■■□□□ 1.38
CXCL3-201ENST00000296026 ADD2P35612 726 aa23.7■■□□□ 1.38
CXCL3-201ENST00000296026 MNX1P50219 401 aaPredicted RBP23.7■■□□□ 1.38
CXCL3-201ENST00000296026 LBX2Q6XYB7 198 aa23.7■■□□□ 1.38
CXCL3-201ENST00000296026 BTBD7Q9P203 1132 aa23.7■■□□□ 1.38
CXCL3-201ENST00000296026 TRIOBPQ9H2D6 2365 aa23.7■■□□□ 1.38
CXCL3-201ENST00000296026 A0A1W2PRG0 241 aa23.69■■□□□ 1.38
CXCL3-201ENST00000296026 PRKAB2O43741 272 aa23.69■■□□□ 1.38
CXCL3-201ENST00000296026 GLRX3O76003 335 aaKnown RBP23.69■■□□□ 1.38
CXCL3-201ENST00000296026 MBD4O95243 580 aa23.69■■□□□ 1.38
CXCL3-201ENST00000296026 MAP2K5Q13163 448 aa23.69■■□□□ 1.38
CXCL3-201ENST00000296026 WDR78Q5VTH9 848 aa23.69■■□□□ 1.38
CXCL3-201ENST00000296026 SLC44A5Q8NCS7 719 aa23.69■■□□□ 1.38
CXCL3-201ENST00000296026 HAUS7Q99871 368 aa23.69■■□□□ 1.38
CXCL3-201ENST00000296026 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.69■■□□□ 1.38
CXCL3-201ENST00000296026 SPDYE16A6NNV3 312 aaPredicted RBP23.68■■□□□ 1.38
CXCL3-201ENST00000296026 DYNLL2Q96FJ2 89 aa23.68■■□□□ 1.38
CXCL3-201ENST00000296026 C11orf49Q9H6J7 331 aa23.68■■□□□ 1.38
CXCL3-201ENST00000296026 SWAP70Q9UH65 585 aa23.68■■□□□ 1.38
CXCL3-201ENST00000296026 CCND3P30281 292 aaPredicted RBP23.67■■□□□ 1.38
CXCL3-201ENST00000296026 C20orf194Q5TEA3 1177 aa23.67■■□□□ 1.38
CXCL3-201ENST00000296026 TMEM179Q6ZVK1 233 aa23.67■■□□□ 1.38
CXCL3-201ENST00000296026 ATP8A2Q9NTI2 1148 aa23.67■■□□□ 1.38
CXCL3-201ENST00000296026 SLC15A5A6NIM6 579 aa23.66■■□□□ 1.38
CXCL3-201ENST00000296026 CHGBP05060 677 aa23.66■■□□□ 1.38
CXCL3-201ENST00000296026 PTPREP23469 700 aa23.66■■□□□ 1.38
CXCL3-201ENST00000296026 C7orf61Q8IZ16 206 aa23.66■■□□□ 1.38
CXCL3-201ENST00000296026 LRRCC1Q9C099 1032 aa23.66■■□□□ 1.38
CXCL3-201ENST00000296026 IVNS1ABPQ9Y6Y0 642 aa23.66■■□□□ 1.38
CXCL3-201ENST00000296026 COG2Q14746 738 aa23.65■■□□□ 1.38
CXCL3-201ENST00000296026 TANGO6Q9C0B7 1094 aa23.65■■□□□ 1.38
CXCL3-201ENST00000296026 STAP2Q9UGK3 403 aa23.65■■□□□ 1.38
CXCL3-201ENST00000296026 MYH8P13535 1937 aa23.65■■□□□ 1.38
CXCL3-201ENST00000296026 BAZ2AQ9UIF9 1905 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms