RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 LPIN2Q92539 896 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 PUS3Q9BZE2 481 aaKnown RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 RNF41Q9H4P4 317 aaPredicted RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 ZHX1Q9UKY1 873 aaPredicted RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 RANBP6O60518 1105 aaKnown RBP7.03□□□□□ -1.28
VCAM1-201ENST00000294728 DTNBO60941 627 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 ATP1A3P13637 1013 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 LMOD1P29536 600 aaPredicted RBP7.03□□□□□ -1.28
VCAM1-201ENST00000294728 CDC27P30260 824 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 ADORA1P30542 326 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 CASQ1P31415 396 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 PIP4K2AP48426 406 aaPredicted RBP7.03□□□□□ -1.28
VCAM1-201ENST00000294728 CTSWP56202 376 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 GUCY1B3Q02153 619 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 FKBP4Q02790 459 aaKnown RBP eCLIP7.03□□□□□ -1.28
VCAM1-201ENST00000294728 CFAP100Q494V2 611 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 GORABQ5T7V8 394 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 SPATA1Q5VX52 437 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 CC2D1AQ6P1N0 951 aaPredicted RBP7.03□□□□□ -1.28
VCAM1-201ENST00000294728 MNS1Q8NEH6 495 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 RUBCNQ92622 972 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 EXOC4Q96A65 974 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 FANCLQ9NW38 375 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 CACNA1SQ13698 1873 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 KAT6BQ8WYB5 2073 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 PDS5AQ29RF7 1337 aaKnown RBP7.03□□□□□ -1.28
VCAM1-201ENST00000294728 ANKRD18BA2A2Z9 1011 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 FANCGO15287 622 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 TBC1D8O95759 1140 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 CCDC175P0C221 793 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 PDE6AP16499 860 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 TXLNAP40222 546 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 TRAPPC10P48553 1259 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 TOB1P50616 345 aaPredicted RBP7.03□□□□□ -1.28
VCAM1-201ENST00000294728 CUL4BQ13620 913 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 SCARF1Q14162 830 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 SART3Q15020 963 aaKnown RBP7.03□□□□□ -1.28
VCAM1-201ENST00000294728 PUM3Q15397 648 aaKnown RBP7.03□□□□□ -1.28
VCAM1-201ENST00000294728 TPRNQ4KMQ1 711 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 AKNAD1Q5T1N1 836 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 HOMER1Q86YM7 354 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 TRIM22Q8IYM9 498 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 DPF2Q92785 391 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 GOLGA1Q92805 767 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 SMARCE1Q969G3 411 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 RAI14Q9P0K7 980 aa7.03□□□□□ -1.28
VCAM1-201ENST00000294728 TTF2Q9UNY4 1162 aaKnown RBP7.03□□□□□ -1.28
VCAM1-201ENST00000294728 GOLGA8AA7E2F4 631 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 PDE8AO60658 829 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 MYL1P05976 194 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 SPAG1Q07617 926 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 PNOCQ13519 176 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 CNGA4Q8IV77 575 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 CRACR2BQ8N4Y2 399 aaPredicted RBP7.02□□□□□ -1.29
VCAM1-201ENST00000294728 GPHNQ9NQX3 736 aaPredicted RBP7.02□□□□□ -1.29
VCAM1-201ENST00000294728 SLC12A7Q9Y666 1083 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 AKR1B15C9JRZ8 316 aaPredicted RBP7.02□□□□□ -1.29
VCAM1-201ENST00000294728 STARD3NLO95772 234 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 GPS2Q13227 327 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 SLC9C2Q5TAH2 1124 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 CHST3Q7LGC8 479 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 SRGAP1Q7Z6B7 1085 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 NLRP10Q86W26 655 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 IFNL3Q8IZI9 196 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 ZNF594Q96JF6 807 aaPredicted RBP7.02□□□□□ -1.29
VCAM1-201ENST00000294728 UTP14AQ9BVJ6 771 aaKnown RBP7.02□□□□□ -1.29
VCAM1-201ENST00000294728 ARFGAP3Q9NP61 516 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 RBM28Q9NW13 759 aaKnown RBP7.02□□□□□ -1.29
VCAM1-201ENST00000294728 ADD3Q9UEY8 706 aaKnown RBP7.02□□□□□ -1.29
VCAM1-201ENST00000294728 LIMA1Q9UHB6 759 aaKnown RBP7.02□□□□□ -1.29
VCAM1-201ENST00000294728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.02□□□□□ -1.29
VCAM1-201ENST00000294728 CLSTN1O94985 981 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 CALM1P0DP23 149 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 CALM2P0DP24 149 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 CALM3P0DP25 149 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 SLC5A1P13866 664 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 PPP2R3AQ06190 1150 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 MAP3K12Q12852 859 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 WHAMMP3Q1A5X7 153 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 TMEM67Q5HYA8 995 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 COL13A1Q5TAT6 717 aaPredicted RBP7.02□□□□□ -1.29
VCAM1-201ENST00000294728 OTUD7BQ6GQQ9 843 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 IQCDQ96DY2 449 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 FUT8Q9BYC5 575 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 GBP3Q9H0R5 595 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 VIPAS39Q9H9C1 493 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 CDC23Q9UJX2 597 aa7.02□□□□□ -1.29
VCAM1-201ENST00000294728 ZNF532Q9HCE3 1301 aa7.01□□□□□ -1.29
VCAM1-201ENST00000294728 PRPF3O43395 683 aaKnown RBP7.01□□□□□ -1.29
VCAM1-201ENST00000294728 A1BGP04217 495 aa7.01□□□□□ -1.29
VCAM1-201ENST00000294728 XBP1P17861 261 aa7.01□□□□□ -1.29
VCAM1-201ENST00000294728 PDE4BQ07343 736 aa7.01□□□□□ -1.29
VCAM1-201ENST00000294728 METTL24Q5JXM2 366 aa7.01□□□□□ -1.29
VCAM1-201ENST00000294728 WDR93Q6P2C0 686 aa7.01□□□□□ -1.29
VCAM1-201ENST00000294728 TMTC1Q8IUR5 882 aa7.01□□□□□ -1.29
VCAM1-201ENST00000294728 LINC00116Q8NCU8 138 aa7.01□□□□□ -1.29
VCAM1-201ENST00000294728 RPGRIP1Q96KN7 1286 aa7.01□□□□□ -1.29
VCAM1-201ENST00000294728 NACAP1Q9BZK3 213 aa7.01□□□□□ -1.29
VCAM1-201ENST00000294728 PIH1D3Q9NQM4 214 aaKnown RBP7.01□□□□□ -1.29
VCAM1-201ENST00000294728 NFE2L3Q9Y4A8 694 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms