RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ARHGAP42A6NI28 874 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 SFMBT2Q5VUG0 894 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 CCDC13Q8IYE1 715 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 TEX11Q8IYF3 940 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 FAM89AQ96GI7 184 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 TRIM4Q9C037 500 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 KDM5BQ9UGL1 1544 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 ABCB4P21439 1286 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 SNX29Q8TEQ0 813 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 TFCP2L1Q9NZI6 479 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 SEPT10Q9P0V9 454 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 SOS1Q07889 1333 aaPredicted RBP17.86■□□□□ 0.45
SSRP1-202ENST00000293880 ITGA6P23229 1130 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 TNNI3KQ59H18 835 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 CCDC89Q8N998 374 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 MRFAP1Q9Y605 127 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 FPGT-TNNI3KV9GXZ4 949 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 PRKG1Q13976 671 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 BIN2Q9UBW5 565 aaPredicted RBP17.86■□□□□ 0.45
SSRP1-202ENST00000293880 MAP3K5Q99683 1374 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 THOC2Q8NI27 1593 aaKnown RBP17.86■□□□□ 0.45
SSRP1-202ENST00000293880 SERTAD1Q9UHV2 236 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 KLHL30Q0D2K2 578 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 U2AF1L4Q8WU68 220 aaKnown RBP17.86■□□□□ 0.45
SSRP1-202ENST00000293880 XAGE2Q96GT9 111 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 DPH5Q9H2P9 285 aa17.86■□□□□ 0.45
SSRP1-202ENST00000293880 FAF1Q9UNN5 650 aaPredicted RBP17.86■□□□□ 0.45
SSRP1-202ENST00000293880 SLC9C1Q4G0N8 1177 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 FAM47AQ5JRC9 791 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 PEX26Q7Z412 305 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 XPO4Q9C0E2 1151 aaKnown RBP17.85■□□□□ 0.45
SSRP1-202ENST00000293880 CTNNA1P35221 906 aaKnown RBP17.85■□□□□ 0.45
SSRP1-202ENST00000293880 STK10O94804 968 aaKnown RBP17.85■□□□□ 0.45
SSRP1-202ENST00000293880 SMTNP53814 917 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 DCUN1D2Q6PH85 259 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 CABP7Q86V35 215 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 VPS54Q9P1Q0 977 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 NFE2L3Q9Y4A8 694 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 RPRD2Q5VT52 1461 aaKnown RBP17.85■□□□□ 0.45
SSRP1-202ENST00000293880 PAK2Q13177 524 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 CUL4BQ13620 913 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 ZSCAN26Q16670 478 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 MRPL46Q9H2W6 279 aaKnown RBP17.85■□□□□ 0.45
SSRP1-202ENST00000293880 PLCB1Q9NQ66 1216 aa17.85■□□□□ 0.45
SSRP1-202ENST00000293880 ARHGEF35A5YM69 484 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 RPS6KA1Q15418 735 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 KRT71Q3SY84 523 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 DIS3L2Q8IYB7 885 aaKnown RBP17.84■□□□□ 0.45
SSRP1-202ENST00000293880 CALCRLQ16602 461 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 C2CD5Q86YS7 1000 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 DBNDD2Q9BQY9 259 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 NYXQ9GZU5 481 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 UHRF1BP1LA0JNW5 1464 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 SEC31AO94979 1220 aaKnown RBP17.84■□□□□ 0.45
SSRP1-202ENST00000293880 SAT1P21673 171 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 MAGEA1P43355 309 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 CUTAO60888 179 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 DDB1Q16531 1140 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 CFAP221Q4G0U5 840 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 DDX41Q9UJV9 622 aaKnown RBP17.84■□□□□ 0.45
SSRP1-202ENST00000293880 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
SSRP1-202ENST00000293880 ANO3Q9BYT9 981 aa17.83■□□□□ 0.45
SSRP1-202ENST00000293880 TCP10Q12799 353 aa17.83■□□□□ 0.45
SSRP1-202ENST00000293880 IFIH1Q9BYX4 1025 aaKnown RBP17.83■□□□□ 0.45
SSRP1-202ENST00000293880 CCDC117Q8IWD4 279 aaPredicted RBP17.83■□□□□ 0.44
SSRP1-202ENST00000293880 UFL1O94874 794 aa17.83■□□□□ 0.44
SSRP1-202ENST00000293880 STX2P32856 288 aa17.83■□□□□ 0.44
SSRP1-202ENST00000293880 RILPL1Q5EBL4 403 aa17.83■□□□□ 0.44
SSRP1-202ENST00000293880 CHAMP1Q96JM3 812 aa17.83■□□□□ 0.44
SSRP1-202ENST00000293880 ZC3H12CQ9C0D7 883 aaKnown RBP17.83■□□□□ 0.44
SSRP1-202ENST00000293880 KCNK3O14649 394 aa17.83■□□□□ 0.44
SSRP1-202ENST00000293880 ARHGAP25P42331 645 aa17.83■□□□□ 0.44
SSRP1-202ENST00000293880 LMBRD1Q9NUN5 540 aa17.83■□□□□ 0.44
SSRP1-202ENST00000293880 GPAA1O43292 621 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 ADCY1Q08828 1119 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 TMED1Q13445 227 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 PPP2R5AQ15172 486 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 HERC4Q5GLZ8 1057 aaPredicted RBP17.82■□□□□ 0.44
SSRP1-202ENST00000293880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
SSRP1-202ENST00000293880 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.82■□□□□ 0.44
SSRP1-202ENST00000293880 EFCC1Q9HA90 598 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 CYP2J2P51589 502 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 TRAF1Q13077 416 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 CTAGE3PQ8IX95 158 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 KRT12Q99456 494 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 PARP3Q9Y6F1 533 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 FRMPD2Q68DX3 1309 aaPredicted RBP17.82■□□□□ 0.44
SSRP1-202ENST00000293880 ZBTB7BO15156 539 aaPredicted RBP17.82■□□□□ 0.44
SSRP1-202ENST00000293880 KIF22Q14807 665 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 IMPACTQ9P2X3 320 aa17.82■□□□□ 0.44
SSRP1-202ENST00000293880 IL1RL1Q01638 556 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 RUFY4Q6ZNE9 571 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 PIK3R5Q8WYR1 880 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 RGS16O15492 202 aaPredicted RBP17.81■□□□□ 0.44
SSRP1-202ENST00000293880 EXOC3O60645 756 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 ADCY7P51828 1080 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 KAZNQ674X7 775 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 PALM2Q8IXS6 379 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 NUP58Q9BVL2 599 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 PTPN22Q9Y2R2 807 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms