RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 USP14P54578 494 aa12.83□□□□□ -0.36
USP41-201ENST00000292729 JAG1P78504 1218 aa12.83□□□□□ -0.36
USP41-201ENST00000292729 TRIM60Q495X7 471 aa12.83□□□□□ -0.36
USP41-201ENST00000292729 OLFML2BQ68BL8 750 aa12.83□□□□□ -0.36
USP41-201ENST00000292729 ATF7IPQ6VMQ6 1270 aa12.83□□□□□ -0.36
USP41-201ENST00000292729 SH3RF3Q8TEJ3 882 aaPredicted RBP12.83□□□□□ -0.36
USP41-201ENST00000292729 DNAJC18Q9H819 358 aa12.83□□□□□ -0.36
USP41-201ENST00000292729 PDLIM7Q9NR12 457 aa12.83□□□□□ -0.36
USP41-201ENST00000292729 MYH1P12882 1939 aa12.83□□□□□ -0.36
USP41-201ENST00000292729 SEPT4O43236 478 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 STRNO43815 780 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 IGSF3O75054 1194 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 GDF11O95390 407 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 HLA-DOAP06340 250 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 CYP2C19P33261 490 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 PPP4CP60510 307 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 GORABQ5T7V8 394 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 CATSPERGQ6ZRH7 1159 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 TBC1D9Q6ZT07 1266 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 TRPV1Q8NER1 839 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 NPLOC4Q8TAT6 608 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 SSH1Q8WYL5 1049 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 RNPC3Q96LT9 517 aaKnown RBP12.82□□□□□ -0.36
USP41-201ENST00000292729 LRP2BPQ9P2M1 347 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 TACC3Q9Y6A5 838 aa12.82□□□□□ -0.36
USP41-201ENST00000292729 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.81□□□□□ -0.36
USP41-201ENST00000292729 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.81□□□□□ -0.36
USP41-201ENST00000292729 TRIM43BA6NCK2 446 aa12.81□□□□□ -0.36
USP41-201ENST00000292729 ARID4AP29374 1257 aaPredicted RBP12.81□□□□□ -0.36
USP41-201ENST00000292729 PLA2G5P39877 138 aa12.81□□□□□ -0.36
USP41-201ENST00000292729 ALDH1L2Q3SY69 923 aa12.81□□□□□ -0.36
USP41-201ENST00000292729 DPP9Q86TI2 863 aa12.81□□□□□ -0.36
USP41-201ENST00000292729 ATXN2LQ8WWM7 1075 aaKnown RBP12.81□□□□□ -0.36
USP41-201ENST00000292729 TRIM43Q96BQ3 446 aaPredicted RBP12.81□□□□□ -0.36
USP41-201ENST00000292729 NEUROD6Q96NK8 337 aa12.81□□□□□ -0.36
USP41-201ENST00000292729 FEZ1Q99689 392 aa12.81□□□□□ -0.36
USP41-201ENST00000292729 AATFQ9NY61 560 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP41-201ENST00000292729 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
USP41-201ENST00000292729 FLT1P17948 1338 aa12.81□□□□□ -0.36
USP41-201ENST00000292729 ZNFX1Q9P2E3 1918 aaKnown RBP12.8□□□□□ -0.36
USP41-201ENST00000292729 SMCHD1A6NHR9 2005 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 UQCRFS1P1P0C7P4 283 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 TFCP2Q12800 502 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 GRIN2CQ14957 1233 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 NAA16Q6N069 864 aaPredicted RBP12.8□□□□□ -0.36
USP41-201ENST00000292729 SH3RF1Q7Z6J0 888 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 MAPKAPK5Q8IW41 473 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 FAM122AQ96E09 287 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 SLC5A4Q9NY91 659 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 PALD1Q9ULE6 856 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 NCOR1O75376 2440 aa12.8□□□□□ -0.36
USP41-201ENST00000292729 MYO5AQ9Y4I1 1855 aaKnown RBP12.79□□□□□ -0.36
USP41-201ENST00000292729 GH2P01242 217 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 CLTBP09497 229 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 DNAJB2P25686 324 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 ADCYAP1R1P41586 468 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 LRRC41Q15345 812 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 SHROOM1Q2M3G4 852 aaPredicted RBP12.79□□□□□ -0.36
USP41-201ENST00000292729 PI16Q6UXB8 463 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 USP38Q8NB14 1042 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 KIAA1683Q9H0B3 1180 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 BTBD7Q9P203 1132 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 ZNF521Q96K83 1311 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 MYO9BQ13459 2157 aa12.79□□□□□ -0.36
USP41-201ENST00000292729 SPDYE16A6NNV3 312 aaPredicted RBP12.78□□□□□ -0.36
USP41-201ENST00000292729 KIAA0355O15063 1070 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
USP41-201ENST00000292729 RAG1P15918 1043 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 VCAM1P19320 739 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 ADORA2AP29274 412 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 MCAMP43121 646 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 TLE2Q04725 743 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 FPGSQ05932 587 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 ZYXQ15942 572 aaKnown RBP12.78□□□□□ -0.36
USP41-201ENST00000292729 TATDN1Q6P1N9 297 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 SHCBP1Q8NEM2 672 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 GAS2L1Q99501 681 aaPredicted RBP12.78□□□□□ -0.36
USP41-201ENST00000292729 ZNF576Q9H609 170 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 PHF24Q9UPV7 400 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 PLXNA1Q9UIW2 1896 aa12.78□□□□□ -0.36
USP41-201ENST00000292729 A0A0G2JMZ2 1700 aa12.77□□□□□ -0.36
USP41-201ENST00000292729 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
USP41-201ENST00000292729 AKNAD1Q5T1N1 836 aa12.77□□□□□ -0.37
USP41-201ENST00000292729 CERS3Q8IU89 383 aa12.77□□□□□ -0.37
USP41-201ENST00000292729 FERMT2Q96AC1 680 aa12.77□□□□□ -0.37
USP41-201ENST00000292729 TIFAQ96CG3 184 aa12.77□□□□□ -0.37
USP41-201ENST00000292729 ASB2Q96Q27 587 aa12.77□□□□□ -0.37
USP41-201ENST00000292729 HOXC10Q9NYD6 342 aa12.77□□□□□ -0.37
USP41-201ENST00000292729 THEGQ9P2T0 379 aa12.77□□□□□ -0.37
USP41-201ENST00000292729 E9PSI1 815 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 ITGB8P26012 769 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 EPHB4P54760 987 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 MTX1Q13505 466 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 COG2Q14746 738 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 RAB3GAP1Q15042 981 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 ANO1Q5XXA6 986 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 RNF180Q86T96 592 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 ABRAQ8N0Z2 381 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 MOV10L1Q9BXT6 1211 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms