RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 SYN1P17600 705 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 USP5P45974 858 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 ERVK-9P63128 1117 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 ERVK-24P63145 666 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 GABPAQ06546 454 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 SEPT2Q15019 361 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 MORN1Q5T089 497 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 LHX8Q68G74 356 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 SIAH1Q8IUQ4 282 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 C7orf61Q8IZ16 206 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 LCORLQ8N3X6 602 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 GPRC5AQ8NFJ5 357 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 RHPN1Q8TCX5 695 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 SDR42E1Q8WUS8 393 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 DYNLL2Q96FJ2 89 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 AS3MTQ9HBK9 375 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 TMOD4Q9NZQ9 345 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 COG6Q9Y2V7 657 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 C19orf81C9J6K1 198 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 GOLIM4O00461 696 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 SMARCA5O60264 1052 aaPredicted RBP10.74□□□□□ -0.69
TFF1-201ENST00000291527 EVI5O60447 810 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
TFF1-201ENST00000291527 PDE6AP16499 860 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 CERKLQ49MI3 558 aaPredicted RBP10.74□□□□□ -0.69
TFF1-201ENST00000291527 USP17L2Q6R6M4 530 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 CATSPERGQ6ZRH7 1159 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 GPR142Q7Z601 462 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 TRPV1Q8NER1 839 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 NPLOC4Q8TAT6 608 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 HTATIP2Q9BUP3 242 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 TBC1D2Q9BYX2 928 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 PRUNE2Q8WUY3 3088 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 RPTORQ8N122 1335 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 ZNF532Q9HCE3 1301 aa10.74□□□□□ -0.69
TFF1-201ENST00000291527 HLA-DOAP06340 250 aa10.73□□□□□ -0.69
TFF1-201ENST00000291527 VCAM1P19320 739 aa10.73□□□□□ -0.69
TFF1-201ENST00000291527 PABPC4Q13310 644 aaKnown RBP eCLIP10.73□□□□□ -0.69
TFF1-201ENST00000291527 ABCB5Q2M3G0 1257 aa10.73□□□□□ -0.69
TFF1-201ENST00000291527 SLC9C2Q5TAH2 1124 aa10.73□□□□□ -0.69
TFF1-201ENST00000291527 DNAJC2Q99543 621 aaKnown RBP10.73□□□□□ -0.69
TFF1-201ENST00000291527 TRIM34Q9BYJ4 488 aa10.73□□□□□ -0.69
TFF1-201ENST00000291527 ARMT1Q9H993 441 aa10.73□□□□□ -0.69
TFF1-201ENST00000291527 HMX1Q9NP08 348 aaPredicted RBP10.73□□□□□ -0.69
TFF1-201ENST00000291527 ZBTB40Q9NUA8 1239 aa10.73□□□□□ -0.69
TFF1-201ENST00000291527 SERPINB13Q9UIV8 391 aa10.73□□□□□ -0.69
TFF1-201ENST00000291527 OGDHLQ9ULD0 1010 aa10.73□□□□□ -0.69
TFF1-201ENST00000291527 CDH23Q9H251 3354 aa10.72□□□□□ -0.69
TFF1-201ENST00000291527 MAGEB6P1A0A0J9YX57 407 aa10.72□□□□□ -0.69
TFF1-201ENST00000291527 SPDYE16A6NNV3 312 aaPredicted RBP10.72□□□□□ -0.69
TFF1-201ENST00000291527 MAP3K12Q12852 859 aa10.72□□□□□ -0.69
TFF1-201ENST00000291527 LRRC26Q2I0M4 334 aa10.72□□□□□ -0.69
TFF1-201ENST00000291527 NECAB2Q7Z6G3 386 aa10.72□□□□□ -0.69
TFF1-201ENST00000291527 PLEKHH3Q7Z736 793 aa10.72□□□□□ -0.69
TFF1-201ENST00000291527 C12orf42Q96LP6 360 aa10.72□□□□□ -0.69
TFF1-201ENST00000291527 GDF15Q99988 308 aa10.72□□□□□ -0.69
TFF1-201ENST00000291527 NUDT12Q9BQG2 462 aa10.72□□□□□ -0.69
TFF1-201ENST00000291527 BOLA2Q9H3K6 86 aa10.72□□□□□ -0.69
TFF1-201ENST00000291527 RPAP3Q9H6T3 665 aaPredicted RBP10.72□□□□□ -0.69
TFF1-201ENST00000291527 A0A0G2JMZ2 1700 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 USP17L15C9J2P7 530 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 USP17L13C9JLJ4 530 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 USP17L11C9JVI0 530 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 USP17L18D6R9N7 530 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 USP17L22D6RA61 530 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 USP17L17D6RBQ6 530 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 USP17L19D6RCP7 530 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 USP17L20D6RJB6 530 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 IGHA2P01877 340 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 COL6A1P12109 1028 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 AKR1B1P15121 316 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 USP17L24Q0WX57 530 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 ZBED9Q6R2W3 1325 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 FEZ1Q99689 392 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 KIAA1683Q9H0B3 1180 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 EHD4Q9H223 541 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 C11orf49Q9H6J7 331 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 DCP1AQ9NPI6 582 aaPredicted RBP10.71□□□□□ -0.69
TFF1-201ENST00000291527 MCM9Q9NXL9 1143 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 NR2E3Q9Y5X4 410 aa10.71□□□□□ -0.69
TFF1-201ENST00000291527 COBLO75128 1261 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 POLR3DP05423 398 aaPredicted RBP10.7□□□□□ -0.7
TFF1-201ENST00000291527 XRCC5P13010 732 aaKnown RBP10.7□□□□□ -0.7
TFF1-201ENST00000291527 PTPREP23469 700 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 MAPK4P31152 587 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 CYP2C19P33261 490 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 MAGEA10P43363 369 aaPredicted RBP10.7□□□□□ -0.7
TFF1-201ENST00000291527 MAP2K5Q13163 448 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 PRAMEF19Q5SWL8 479 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 ANO1Q5XXA6 986 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 Q7L0L9 218 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 NBPF3Q9H094 633 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 GINM1Q9NU53 330 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 RABGAP1Q9Y3P9 1069 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 PLXNA1Q9UIW2 1896 aa10.7□□□□□ -0.7
TFF1-201ENST00000291527 VCANP13611 3396 aa10.69□□□□□ -0.7
TFF1-201ENST00000291527 MPHOSPH10O00566 681 aaKnown RBP10.69□□□□□ -0.7
TFF1-201ENST00000291527 MBD4O95243 580 aa10.69□□□□□ -0.7
TFF1-201ENST00000291527 ZKSCAN1P17029 563 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms