RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 DYNLL2Q96FJ2 89 aa11.53□□□□□ -0.56
HMHB1-201ENST00000289448 C12orf42Q96LP6 360 aa11.53□□□□□ -0.56
HMHB1-201ENST00000289448 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
HMHB1-201ENST00000289448 CYP2D7A0A087X1C5 515 aa11.52□□□□□ -0.57
HMHB1-201ENST00000289448 A0A1W2PRG0 241 aa11.52□□□□□ -0.57
HMHB1-201ENST00000289448 CNMDO75829 334 aa11.52□□□□□ -0.57
HMHB1-201ENST00000289448 TRIM32Q13049 653 aa11.52□□□□□ -0.57
HMHB1-201ENST00000289448 UBE3CQ15386 1083 aa11.52□□□□□ -0.57
HMHB1-201ENST00000289448 GPRC5AQ8NFJ5 357 aa11.52□□□□□ -0.57
HMHB1-201ENST00000289448 U2AF1L4Q8WU68 220 aaKnown RBP11.52□□□□□ -0.57
HMHB1-201ENST00000289448 FEZ1Q99689 392 aa11.52□□□□□ -0.57
HMHB1-201ENST00000289448 KIAA1683Q9H0B3 1180 aa11.52□□□□□ -0.57
HMHB1-201ENST00000289448 PUS7LQ9H0K6 701 aaKnown RBP11.52□□□□□ -0.57
HMHB1-201ENST00000289448 PORCNQ9H237 461 aa11.52□□□□□ -0.57
HMHB1-201ENST00000289448 ECHDC1Q9NTX5 307 aa11.52□□□□□ -0.57
HMHB1-201ENST00000289448 SZT2Q5T011 3432 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 VCAM1P19320 739 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 ERVK-9P63128 1117 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 ERVK-24P63145 666 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 KIAA1755Q5JYT7 1200 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 CATSPERGQ6ZRH7 1159 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 CLEC10AQ8IUN9 316 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 SIAH1Q8IUQ4 282 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.51□□□□□ -0.57
HMHB1-201ENST00000289448 CABP5Q9NP86 173 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 PAK6Q9NQU5 681 aaPredicted RBP11.51□□□□□ -0.57
HMHB1-201ENST00000289448 ATP8A2Q9NTI2 1148 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 LAMA3Q16787 3333 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 NAV1Q8NEY1 1877 aa11.51□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L15C9J2P7 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L13C9JLJ4 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L12C9JPN9 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L11C9JVI0 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L21D6R901 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L18D6R9N7 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L22D6RA61 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L17D6RBQ6 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L19D6RCP7 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L20D6RJB6 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 MPHOSPH10O00566 681 aaKnown RBP11.5□□□□□ -0.57
HMHB1-201ENST00000289448 SGPL1O95470 568 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 AKR1B1P15121 316 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 CYP2B6P20813 491 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP14P54578 494 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 RRP1P56182 461 aaKnown RBP11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP17L24Q0WX57 530 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 C12orf60Q5U649 245 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 OTUD7AQ8TE49 926 aaPredicted RBP11.5□□□□□ -0.57
HMHB1-201ENST00000289448 TRIB2Q92519 343 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 USP6NLQ92738 828 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 DEFB118Q96PH6 123 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 PAGR1Q9BTK6 254 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 SLC4A4Q9Y6R1 1079 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 PLXNB2O15031 1838 aa11.5□□□□□ -0.57
HMHB1-201ENST00000289448 H0YGN5 161 aa11.49□□□□□ -0.57
HMHB1-201ENST00000289448 HMGCRP04035 888 aa11.49□□□□□ -0.57
HMHB1-201ENST00000289448 CDK8P49336 464 aa11.49□□□□□ -0.57
HMHB1-201ENST00000289448 CTR9Q6PD62 1173 aa11.49□□□□□ -0.57
HMHB1-201ENST00000289448 GPR142Q7Z601 462 aa11.49□□□□□ -0.57
HMHB1-201ENST00000289448 OSBP2Q969R2 916 aa11.49□□□□□ -0.57
HMHB1-201ENST00000289448 STRBPQ96SI9 672 aaKnown RBP11.49□□□□□ -0.57
HMHB1-201ENST00000289448 CRISPLD2Q9H0B8 497 aa11.49□□□□□ -0.57
HMHB1-201ENST00000289448 RPAP3Q9H6T3 665 aaPredicted RBP11.49□□□□□ -0.57
HMHB1-201ENST00000289448 BTBD7Q9P203 1132 aa11.49□□□□□ -0.57
HMHB1-201ENST00000289448 RABGAP1Q9Y3P9 1069 aa11.49□□□□□ -0.57
HMHB1-201ENST00000289448 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
HMHB1-201ENST00000289448 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
HMHB1-201ENST00000289448 FARP2O94887 1054 aaPredicted RBP11.48□□□□□ -0.57
HMHB1-201ENST00000289448 TFRCP02786 760 aaKnown RBP11.48□□□□□ -0.57
HMHB1-201ENST00000289448 MAPK4P31152 587 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 MORN1Q5T089 497 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 ZSCAN25Q6NSZ9 544 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 TMEM179Q6ZVK1 233 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 C16orf86Q6ZW13 317 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 PLEKHH3Q7Z736 793 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 KBTBD3Q8NAB2 608 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 GTF3C2Q8WUA4 911 aaPredicted RBP11.48□□□□□ -0.57
HMHB1-201ENST00000289448 CRBNQ96SW2 442 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 NUDT12Q9BQG2 462 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.48□□□□□ -0.57
HMHB1-201ENST00000289448 SWAP70Q9UH65 585 aa11.48□□□□□ -0.57
HMHB1-201ENST00000289448 BAZ2AQ9UIF9 1905 aaKnown RBP11.48□□□□□ -0.57
HMHB1-201ENST00000289448 GSG1L2A8MUP6 293 aa11.47□□□□□ -0.57
HMHB1-201ENST00000289448 RNF113AO15541 343 aaKnown RBP11.47□□□□□ -0.57
HMHB1-201ENST00000289448 XRCC5P13010 732 aaKnown RBP11.47□□□□□ -0.57
HMHB1-201ENST00000289448 CCL14Q16627 93 aa11.47□□□□□ -0.57
HMHB1-201ENST00000289448 HABP4Q5JVS0 413 aaKnown RBP11.47□□□□□ -0.57
HMHB1-201ENST00000289448 MAP3K21Q5TCX8 1036 aa11.47□□□□□ -0.57
HMHB1-201ENST00000289448 PI4K2BQ8TCG2 481 aa11.47□□□□□ -0.57
HMHB1-201ENST00000289448 DIS3LQ8TF46 1054 aaKnown RBP11.47□□□□□ -0.57
HMHB1-201ENST00000289448 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.47□□□□□ -0.57
HMHB1-201ENST00000289448 RPTORQ8N122 1335 aa11.46□□□□□ -0.57
HMHB1-201ENST00000289448 M0R2C6 588 aa11.46□□□□□ -0.57
HMHB1-201ENST00000289448 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.57
HMHB1-201ENST00000289448 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
HMHB1-201ENST00000289448 ICA1Q05084 483 aa11.46□□□□□ -0.57
HMHB1-201ENST00000289448 CACNB2Q08289 660 aaPredicted RBP11.46□□□□□ -0.57
HMHB1-201ENST00000289448 SPICE1Q8N0Z3 855 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms