RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 WDR78Q5VTH9 848 aa19.49■□□□□ 0.71
PCDHA13-201ENST00000289272 HYOU1Q9Y4L1 999 aa19.49■□□□□ 0.71
PCDHA13-201ENST00000289272 LDHBP07195 334 aaKnown RBP19.49■□□□□ 0.71
PCDHA13-201ENST00000289272 ICE2Q659A1 982 aa19.49■□□□□ 0.71
PCDHA13-201ENST00000289272 HEATR3Q7Z4Q2 680 aa19.49■□□□□ 0.71
PCDHA13-201ENST00000289272 PDE8AO60658 829 aa19.49■□□□□ 0.71
PCDHA13-201ENST00000289272 LONRF2Q1L5Z9 754 aa19.49■□□□□ 0.71
PCDHA13-201ENST00000289272 SARM1Q6SZW1 724 aa19.49■□□□□ 0.71
PCDHA13-201ENST00000289272 RNF168Q8IYW5 571 aaPredicted RBP19.49■□□□□ 0.71
PCDHA13-201ENST00000289272 FBXO18Q8NFZ0 1043 aa19.49■□□□□ 0.71
PCDHA13-201ENST00000289272 TLDC2A0PJX2 215 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 GPAA1O43292 621 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 LRMPQ12912 555 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 ZNF594Q96JF6 807 aaPredicted RBP19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 DSCC1Q9BVC3 393 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 STK24Q9Y6E0 443 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 MORC2Q9Y6X9 1032 aaPredicted RBP19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 MAST3O60307 1309 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 KCNQ3O43525 872 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 JDP2Q8WYK2 163 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 SLAIN2Q9P270 581 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 B4E1Z4 1266 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 TTC6Q86TZ1 520 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 CDK12Q9NYV4 1490 aaPredicted RBP19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 KIF1CO43896 1103 aaKnown RBP19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 PPP1R7Q15435 360 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 MMS22LQ6ZRQ5 1243 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 IGSF1Q8N6C5 1336 aa19.48■□□□□ 0.71
PCDHA13-201ENST00000289272 RNF40O75150 1001 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 GNA11P29992 359 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 PUM3Q15397 648 aaKnown RBP19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 SYCP3Q8IZU3 236 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 HECW2Q9P2P5 1572 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 PKP1Q13835 747 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 MAP7Q14244 749 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 CNBD1Q8NA66 436 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 OR8K1Q8NGG5 319 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 HIP1RO75146 1068 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 PTH1RQ03431 593 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 EAF2Q96CJ1 260 aaPredicted RBP19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 CLTCL1P53675 1640 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 GNPATO15228 680 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 UBL4BQ8N7F7 174 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 PDE11AQ9HCR9 933 aa19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 CCNL1Q9UK58 526 aaPredicted RBP19.47■□□□□ 0.71
PCDHA13-201ENST00000289272 PNMA8AQ86V59 439 aaPredicted RBP19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 MAIP1Q8WWC4 291 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 A1BGP04217 495 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 ERCC3P19447 782 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 CCT6AP40227 531 aaKnown RBP19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 SH2D4AQ9H788 454 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 CROCC2H7BZ55 1655 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 JAK2O60674 1132 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 TNNI2P48788 182 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 NAPAP54920 295 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 HOMER3Q9NSC5 361 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 NDUFB9Q9Y6M9 179 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 MAGEA1P43355 309 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 VSIG1Q86XK7 387 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 STK32BQ9NY57 414 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 NSFL1CQ9UNZ2 370 aaKnown RBP19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 ERBB4Q15303 1308 aa19.46■□□□□ 0.71
PCDHA13-201ENST00000289272 PHLDB3Q6NSJ2 640 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 CCDC87Q9NVE4 849 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 BAIAP2L1Q9UHR4 511 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 PFKFB2O60825 505 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 FAM204AQ9H8W3 233 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 PTCH1Q13635 1447 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 SV2BQ7L1I2 683 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 RRP36Q96EU6 259 aaKnown RBP19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 BCAP29Q9UHQ4 241 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 ZNF365Q70YC5 407 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 CCHCR1Q8TD31 782 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 NR1I2O75469 434 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 VPS16Q9H269 839 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 MCM9Q9NXL9 1143 aa19.45■□□□□ 0.7
PCDHA13-201ENST00000289272 A0A0D9SFI3 127 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 LIG3P49916 1009 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 CCDC62Q6P9F0 684 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 TBC1D31Q96DN5 1066 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 RNF14Q9UBS8 474 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 CLCN6P51797 869 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 ASIC2Q16515 512 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 SIRT2Q8IXJ6 389 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 CCDC65Q8IXS2 484 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 USP6P35125 1406 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 NCBP1Q09161 790 aaKnown RBP19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 MYSM1Q5VVJ2 828 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 GBP5Q96PP8 586 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 ZKSCAN3Q9BRR0 538 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 ABCC3O15438 1527 aa19.44■□□□□ 0.7
PCDHA13-201ENST00000289272 NLRP1Q9C000 1473 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 E7EWF7 191 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 HOXA7P31268 230 aaPredicted RBP19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 MCUR1Q96AQ8 359 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 EPHB4P54760 987 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 ZKSCAN8Q15776 578 aaPredicted RBP19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 CSGALNACT2Q8N6G5 542 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms