RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TRIM22Q8IYM9 498 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 KIFC2Q96AC6 838 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 ZSWIM5Q9P217 1185 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 DENND2AQ9ULE3 1009 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 DISP2A7MBM2 1401 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 TMEM232C9JQI7 657 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 TMED8Q6PL24 325 aaPredicted RBP11.8□□□□□ -0.52
SKA1-201ENST00000285116 AIDAQ96BJ3 306 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 AATFQ9NY61 560 aaKnown RBP eCLIP11.8□□□□□ -0.52
SKA1-201ENST00000285116 ANAPC4Q9UJX5 808 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 SLIT2O94813 1529 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 BMP15O95972 392 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 NFXL1Q6ZNB6 911 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 SH3RF1Q7Z6J0 888 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 RAB11FIP4Q86YS3 637 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 CRACR2BQ8N4Y2 399 aaPredicted RBP11.8□□□□□ -0.52
SKA1-201ENST00000285116 CNNM1Q9NRU3 951 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 BCL9O00512 1426 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 DUOX1Q9NRD9 1551 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 GSG1L2A8MUP6 293 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 RPS6KA5O75582 802 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 PBX1P40424 430 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 PHKA1P46020 1223 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 MAP3K12Q12852 859 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 SART3Q15020 963 aaKnown RBP11.8□□□□□ -0.52
SKA1-201ENST00000285116 RTN1Q16799 776 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 DIS3L2Q8IYB7 885 aaKnown RBP11.8□□□□□ -0.52
SKA1-201ENST00000285116 FAM177A1Q8N128 213 aaPredicted RBP11.8□□□□□ -0.52
SKA1-201ENST00000285116 SPATA5Q8NB90 893 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 HNRNPLLQ8WVV9 542 aaKnown RBP11.8□□□□□ -0.52
SKA1-201ENST00000285116 SLC26A6Q9BXS9 759 aa11.8□□□□□ -0.52
SKA1-201ENST00000285116 LAMB1P07942 1786 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 H3BQF6 201 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 IRS4O14654 1257 aaPredicted RBP11.79□□□□□ -0.52
SKA1-201ENST00000285116 IFIT3O14879 490 aaKnown RBP11.79□□□□□ -0.52
SKA1-201ENST00000285116 GYS2P54840 703 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 APTXQ7Z2E3 356 aaKnown RBP11.79□□□□□ -0.52
SKA1-201ENST00000285116 DNAJC10Q8IXB1 793 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 WDR24Q96S15 920 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 RNF26Q9BY78 433 aaPredicted RBP11.79□□□□□ -0.52
SKA1-201ENST00000285116 NAPBQ9H115 298 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 RNF41Q9H4P4 317 aaPredicted RBP11.79□□□□□ -0.52
SKA1-201ENST00000285116 RAI14Q9P0K7 980 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 USP21Q9UK80 565 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 MYH13Q9UKX3 1938 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 ITIH6Q6UXX5 1313 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 IDH1O75874 414 aaKnown RBP11.79□□□□□ -0.52
SKA1-201ENST00000285116 FMR1Q06787 632 aaKnown RBP eCLIP11.79□□□□□ -0.52
SKA1-201ENST00000285116 CCDC51Q96ER9 411 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 IQSEC3Q9UPP2 1182 aaPredicted RBP11.79□□□□□ -0.52
SKA1-201ENST00000285116 NFE2L3Q9Y4A8 694 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 KIAA1551Q9HCM1 1747 aa11.79□□□□□ -0.52
SKA1-201ENST00000285116 POTEB2H3BUK9 544 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 SLC5A1P13866 664 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 CDKAL1Q5VV42 579 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 ICE2Q659A1 982 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 MFSD6Q6ZSS7 791 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 ZNF34Q8IZ26 560 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 NACAP1Q9BZK3 213 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 BTBD18B2RXH4 712 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 EIF3JO75822 258 aaKnown RBP11.78□□□□□ -0.52
SKA1-201ENST00000285116 APPP05067 770 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 CYP19A1P11511 503 aaPredicted RBP11.78□□□□□ -0.52
SKA1-201ENST00000285116 HDXQ7Z353 690 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 MED15Q96RN5 788 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 CTAGE1Q96RT6 745 aa11.78□□□□□ -0.52
SKA1-201ENST00000285116 COL14A1Q05707 1796 aaKnown RBP11.78□□□□□ -0.52
SKA1-201ENST00000285116 PCP11498 1178 aaKnown RBP11.77□□□□□ -0.52
SKA1-201ENST00000285116 MAGEA9P43362 315 aa11.77□□□□□ -0.52
SKA1-201ENST00000285116 GTF2A1P52655 376 aaPredicted RBP11.77□□□□□ -0.52
SKA1-201ENST00000285116 CUL4BQ13620 913 aa11.77□□□□□ -0.52
SKA1-201ENST00000285116 HLFQ16534 295 aa11.77□□□□□ -0.52
SKA1-201ENST00000285116 SPATA1Q5VX52 437 aa11.77□□□□□ -0.52
SKA1-201ENST00000285116 FERMT2Q96AC1 680 aa11.77□□□□□ -0.52
SKA1-201ENST00000285116 SERTAD1Q9UHV2 236 aa11.77□□□□□ -0.52
SKA1-201ENST00000285116 CACNA1SQ13698 1873 aa11.77□□□□□ -0.52
SKA1-201ENST00000285116 CASZ1Q86V15 1759 aa11.77□□□□□ -0.52
SKA1-201ENST00000285116 MAST2Q6P0Q8 1798 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 FOXN1O15353 648 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 MBD4O95243 580 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 WTAPQ15007 396 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 ISM2Q6H9L7 571 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 CERS3Q8IU89 383 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 PIGBQ92521 554 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 DHX58Q96C10 678 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 GSDMAQ96QA5 445 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 BRMS1Q9HCU9 246 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 GEMIN8Q9NWZ8 242 aaKnown RBP11.77□□□□□ -0.53
SKA1-201ENST00000285116 VPS18Q9P253 973 aa11.77□□□□□ -0.53
SKA1-201ENST00000285116 MKRN1Q9UHC7 482 aaKnown RBP11.77□□□□□ -0.53
SKA1-201ENST00000285116 POLR2DO15514 142 aaKnown RBP11.76□□□□□ -0.53
SKA1-201ENST00000285116 ERLIN1O75477 346 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 RXRAP19793 462 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 USP5P45974 858 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 SEC23AQ15436 765 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 PYM1Q9BRP8 204 aaKnown RBP11.76□□□□□ -0.53
SKA1-201ENST00000285116 ZNF831Q5JPB2 1677 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms