RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 GRIN1Q05586 938 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 CHAF1AQ13111 956 aaPredicted RBP8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 NFIXQ14938 502 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 POSTNQ15063 836 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 RCSD1Q6JBY9 416 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 KANK3Q6NY19 840 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 TRIML1Q8N9V2 468 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 CCDC150Q8NCX0 1101 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 FBXW7Q969H0 707 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 MAP7D2Q96T17 732 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 CABP5Q9NP86 173 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 VPS54Q9P1Q0 977 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 ACTN4O43707 911 aaKnown RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 BMP6P22004 513 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 GSTO1P78417 241 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 EVX2Q03828 476 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 HSP90AA2PQ14568 343 aaPredicted RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 ARID5BQ14865 1188 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 C12orf60Q5U649 245 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 MTERF4Q7Z6M4 381 aaKnown RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 DZIP1Q86YF9 867 aaKnown RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 CERS3Q8IU89 383 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 SRBD1Q8N5C6 995 aaKnown RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 CNBD1Q8NA66 436 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 CTCFLQ8NI51 663 aaPredicted RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 GJD4Q96KN9 370 aaPredicted RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 PODXL2Q9NZ53 605 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 IFNKQ9P0W0 207 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 PCDHA5Q9Y5H7 936 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 V9GY48 417 aaPredicted RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 LDHBP07195 334 aaKnown RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 SKILP12757 684 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 FANCCQ00597 558 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 ZNF804AQ7Z570 1209 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 DGKHQ86XP1 1220 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 FERMT2Q96AC1 680 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 PDCL3Q9H2J4 239 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 BRMS1Q9HCU9 246 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 POLR2DO15514 142 aaKnown RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 NMT2O60551 498 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 CYP2D6P10635 497 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 TRAPPC10P48553 1259 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 MORC3Q14149 939 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 PFKFB3Q16875 520 aaPredicted RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 CCDC178Q5BJE1 867 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 EARS2Q5JPH6 523 aaKnown RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 CT47A1Q5JQC4 288 aaPredicted RBP8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 PRR5LQ6MZQ0 368 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 OLFM4Q6UX06 510 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 NYAP1Q6ZVC0 841 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 FILIP1Q7Z7B0 1213 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 CCDC24Q8N4L8 307 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 CSRNP2Q9H175 543 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 TCP11L1Q9NUJ3 509 aa8.3□□□□□ -1.08
SPARCL1-201ENST00000282470 FAM205CA6NFA0 338 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 CTIFO43310 598 aaKnown RBP8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 CBFA2T2O43439 604 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 SMC2O95347 1197 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 SCG2P13521 617 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 KIF5BP33176 963 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 FAM196AQ6ZSG2 479 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 SH3RF1Q7Z6J0 888 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 MLKLQ8NB16 471 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 BCL11BQ9C0K0 894 aaPredicted RBP8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 SH3GLB2Q9NR46 395 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 MCM9Q9NXL9 1143 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 ANKIB1Q9P2G1 1089 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 SERTAD1Q9UHV2 236 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 DACH1Q9UI36 760 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 MAN1B1Q9UKM7 699 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 TAOK2Q9UL54 1235 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 QSER1Q2KHR3 1735 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 TSPY2A6NKD2 308 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 RIOK3O14730 519 aaKnown RBP8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 FOXN1O15353 648 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 LMOD1P29536 600 aaPredicted RBP8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 ATP2C1P98194 919 aaPredicted RBP8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 FAM47AQ5JRC9 791 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 SPECC1Q5M775 1068 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 FAM182BQ5T319 152 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 ARMCX5Q6P1M9 558 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 FAM177A1Q8N128 213 aaPredicted RBP8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 LRRC4BQ9NT99 713 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 PAXBP1Q9Y5B6 917 aa8.29□□□□□ -1.08
SPARCL1-201ENST00000282470 BAG3O95817 575 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 USP17L8P0C7I0 530 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 ATP1A3P13637 1013 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 IL1R1P14778 569 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 ZNF18P17022 549 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 ISM2Q6H9L7 571 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 SH3RF3Q8TEJ3 882 aaPredicted RBP8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 SMARCE1Q969G3 411 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 C16orf45Q96MC5 204 aaPredicted RBP8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 IL17RBQ9NRM6 502 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 LDHCP07864 332 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 SLFN14P0C7P3 912 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 PRR29P0C7W0 189 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 TNNT1P13805 278 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 GYS1P13807 737 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 GRM4Q14833 912 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms