RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 DEFB129Q9H1M3 183 aa13.29□□□□□ -0.28
XRCC4-201ENST00000282268 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
XRCC4-201ENST00000282268 TCP11L1Q9NUJ3 509 aa13.29□□□□□ -0.28
XRCC4-201ENST00000282268 CLIP2Q9UDT6 1046 aa13.29□□□□□ -0.28
XRCC4-201ENST00000282268 DHX16O60231 1041 aaKnown RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 RRP1BQ14684 758 aaKnown RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 RAB3GAP1Q15042 981 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 ABCB5Q2M3G0 1257 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 DGKHQ86XP1 1220 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 LRRC47Q8N1G4 583 aaKnown RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 FANCBQ8NB91 859 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 PNMA1Q8ND90 353 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 PHKBQ93100 1093 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 GH2P01242 217 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 JAG1P78504 1218 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 SEPT2Q15019 361 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 EAPPQ56P03 285 aaPredicted RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 NBPF12Q5TAG4 269 aaPredicted RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 LARP1BQ659C4 914 aaKnown RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 TATDN1Q6P1N9 297 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 CPLX2Q6PUV4 134 aaKnown RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 LLPHQ9BRT6 129 aaKnown RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 SLC26A6Q9BXS9 759 aa13.28□□□□□ -0.28
XRCC4-201ENST00000282268 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
XRCC4-201ENST00000282268 SIPA1L1O43166 1804 aa13.27□□□□□ -0.28
XRCC4-201ENST00000282268 SRCAPQ6ZRS2 3230 aa13.27□□□□□ -0.28
XRCC4-201ENST00000282268 GLTPD2A6NH11 291 aa13.27□□□□□ -0.29
XRCC4-201ENST00000282268 SYT1P21579 422 aa13.27□□□□□ -0.29
XRCC4-201ENST00000282268 NUCB2P80303 420 aa13.27□□□□□ -0.29
XRCC4-201ENST00000282268 FOXD4L6Q3SYB3 417 aaPredicted RBP13.27□□□□□ -0.29
XRCC4-201ENST00000282268 DLK2Q6UY11 383 aa13.27□□□□□ -0.29
XRCC4-201ENST00000282268 FOXD4L3Q6VB84 417 aaPredicted RBP13.27□□□□□ -0.29
XRCC4-201ENST00000282268 RASGRP2Q7LDG7 609 aa13.27□□□□□ -0.29
XRCC4-201ENST00000282268 APOBEC3FQ8IUX4 373 aaKnown RBP13.27□□□□□ -0.29
XRCC4-201ENST00000282268 CTCFLQ8NI51 663 aaPredicted RBP13.27□□□□□ -0.29
XRCC4-201ENST00000282268 PIBF1Q8WXW3 757 aa13.27□□□□□ -0.29
XRCC4-201ENST00000282268 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
XRCC4-201ENST00000282268 CABP5Q9NP86 173 aa13.27□□□□□ -0.29
XRCC4-201ENST00000282268 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.29
XRCC4-201ENST00000282268 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.27□□□□□ -0.29
XRCC4-201ENST00000282268 ORC3Q9UBD5 711 aaPredicted RBP13.27□□□□□ -0.29
XRCC4-201ENST00000282268 ISY1Q9ULR0 285 aaKnown RBP13.27□□□□□ -0.29
XRCC4-201ENST00000282268 COL2A1P02458 1487 aaPredicted RBP13.26□□□□□ -0.29
XRCC4-201ENST00000282268 IGKV6D-41A0A0C4DH26 115 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 DDAH1O94760 285 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 PLEKHA8P1O95397 391 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 CALM1P0DP23 149 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 CALM2P0DP24 149 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 CALM3P0DP25 149 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 TOP1P11387 765 aaKnown RBP13.26□□□□□ -0.29
XRCC4-201ENST00000282268 EPHX2P34913 555 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 NT5C2P49902 561 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 GUCY1B3Q02153 619 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 TROAPQ12815 778 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 PRKG1Q13976 671 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 METTL16Q86W50 562 aaKnown RBP13.26□□□□□ -0.29
XRCC4-201ENST00000282268 SMARCC2Q8TAQ2 1214 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 TEPSINQ96N21 525 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 PGAP2Q9UHJ9 254 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 FZD1Q9UP38 647 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 ZDHHC9Q9Y397 364 aa13.26□□□□□ -0.29
XRCC4-201ENST00000282268 hCG_1642624A0A1W2PR95 340 aa13.25□□□□□ -0.29
XRCC4-201ENST00000282268 ADM5C9JUS6 153 aa13.25□□□□□ -0.29
XRCC4-201ENST00000282268 STX6O43752 255 aa13.25□□□□□ -0.29
XRCC4-201ENST00000282268 CDKL5O76039 1030 aa13.25□□□□□ -0.29
XRCC4-201ENST00000282268 TTLL1O95922 423 aa13.25□□□□□ -0.29
XRCC4-201ENST00000282268 GOLGA8HP0CJ92 632 aa13.25□□□□□ -0.29
XRCC4-201ENST00000282268 HMGN5P82970 282 aaKnown RBP13.25□□□□□ -0.29
XRCC4-201ENST00000282268 SSRP1Q08945 709 aaKnown RBP13.25□□□□□ -0.29
XRCC4-201ENST00000282268 ANKS1AQ92625 1134 aa13.25□□□□□ -0.29
XRCC4-201ENST00000282268 TNPO1Q92973 898 aaKnown RBP13.25□□□□□ -0.29
XRCC4-201ENST00000282268 DCPSQ96C86 337 aaKnown RBP13.25□□□□□ -0.29
XRCC4-201ENST00000282268 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 DCAF8L1A6NGE4 600 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 USP17L5A8MUK1 530 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 H3BQV1 296 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 EEF2P13639 858 aaKnown RBP13.24□□□□□ -0.29
XRCC4-201ENST00000282268 FDPSP14324 419 aaKnown RBP13.24□□□□□ -0.29
XRCC4-201ENST00000282268 GUCY1A2P33402 732 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 ICA1Q05084 483 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 IFFO2Q5TF58 517 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 TMEM179Q6ZVK1 233 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 FRMPD2Q68DX3 1309 aaPredicted RBP13.24□□□□□ -0.29
XRCC4-201ENST00000282268 PLIN4Q96Q06 1357 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 NTRK3Q16288 839 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 OTUD7BQ6GQQ9 843 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 USP17L2Q6R6M4 530 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 CCDC84Q86UT8 332 aaPredicted RBP13.24□□□□□ -0.29
XRCC4-201ENST00000282268 STAG2Q8N3U4 1231 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 CHAMP1Q96JM3 812 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 L3MBTL3Q96JM7 780 aaPredicted RBP13.24□□□□□ -0.29
XRCC4-201ENST00000282268 AIFM3Q96NN9 605 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
XRCC4-201ENST00000282268 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
XRCC4-201ENST00000282268 WDR33Q9C0J8 1336 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms