RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 A0A1W2PQ64 194 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 A0A1W2PQD8 194 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 ZNF500O60304 480 aaPredicted RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 KRT2P35908 639 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 PTPAQ15257 358 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 DHX40Q8IX18 779 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 CACTINQ8WUQ7 758 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 SHISA4Q96DD7 197 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 RBM17Q96I25 401 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 CSRNP2Q9H175 543 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 DBNDD1Q9H9R9 158 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 SPATA31A6Q5VVP1 1343 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 FAM196BA6NMK8 535 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 MPHOSPH10O00566 681 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 CDK11BP21127 795 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 U2AF2P26368 475 aaKnown RBP eCLIP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 TCP10Q12799 353 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 DHX8Q14562 1220 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 CFAP100Q494V2 611 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 RBM43Q6ZSC3 357 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 SMYD4Q8IYR2 804 aaPredicted RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 MAP3K14Q99558 947 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 ZC3H12CQ9C0D7 883 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 ATP8A2Q9NTI2 1148 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 BAZ2AQ9UIF9 1905 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 MMP10P09238 476 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 PRR29P0C7W0 189 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 TPD52L1Q16890 204 aaPredicted RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 RILPL1Q5EBL4 403 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 USP17L2Q6R6M4 530 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 ZSCAN29Q8IWY8 852 aaPredicted RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 XPO4Q9C0E2 1151 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 UBA5Q9GZZ9 404 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 TMX4Q9H1E5 349 aaPredicted RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 ARPP21Q9UBL0 812 aaPredicted RBP6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 MAPK8IP1Q9UQF2 711 aa6.93□□□□□ -1.3
TNFSF4-201ENST00000281834 SEMA3EO15041 775 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 PKN1Q16512 942 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 LRRC47Q8N1G4 583 aaKnown RBP6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 TBC1D16Q8TBP0 767 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 BLZF1Q9H2G9 400 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 LEMD3Q9Y2U8 911 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 ANKRD36CQ5JPF3 1778 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 FRMPD2Q68DX3 1309 aaPredicted RBP6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 TPM4P67936 248 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 PTGDRQ13258 359 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 TMTC3Q6ZXV5 915 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 METTL16Q86W50 562 aaKnown RBP6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 KIAA0825Q8IV33 1275 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 FOXP4Q8IVH2 680 aaPredicted RBP6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 EEF2KMTQ96G04 330 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 RNF26Q9BY78 433 aaPredicted RBP6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 IL17RBQ9NRM6 502 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 TTF2Q9UNY4 1162 aaKnown RBP6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 MYH2Q9UKX2 1941 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 CUTAO60888 179 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 LDHCP07864 332 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 SKILP12757 684 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 SCG2P13521 617 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 C12orf60Q5U649 245 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 KRBA2Q6ZNG9 492 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 PROM2Q8N271 834 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 EYA3Q99504 573 aa6.92□□□□□ -1.3
TNFSF4-201ENST00000281834 MYH7P12883 1935 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 PES1O00541 588 aaKnown RBP6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 PPEF1O14829 653 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 NLRP12P59046 1061 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 TTC38Q5R3I4 469 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 RESP18Q5W5W9 173 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 RCSD1Q6JBY9 416 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 DPP8Q6V1X1 898 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 FAM177A1Q8N128 213 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 SYMPKQ92797 1274 aaKnown RBP6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 SMARCE1Q969G3 411 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 FOXP1Q9H334 677 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 FANCLQ9NW38 375 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 ANAPC4Q9UJX5 808 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 COL22A1Q8NFW1 1626 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 CCDC194A0A1B0GVG4 234 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 PPP6R2O75170 966 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 KIF5BP33176 963 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 GSTO1P78417 241 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 POSTNQ15063 836 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 INF2Q27J81 1249 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 PLA2G4DQ86XP0 818 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 KIAA1524Q8TCG1 905 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 TMX1Q9H3N1 280 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 GPCPD1Q9NPB8 672 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 FBXO2Q9UK22 296 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 PCDHAC2Q9Y5I4 1007 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 STK36Q9NRP7 1315 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 USP27XA6NNY8 438 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 PP2D1A8MPX8 630 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 CDK8P49336 464 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 UBASH3AP57075 661 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 DPF2Q92785 391 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 TMEM47Q9BQJ4 181 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 RBM28Q9NW13 759 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms