RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 DHTKD1Q96HY7 919 aaPredicted RBP11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 ZMAT2Q96NC0 199 aaKnown RBP11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 SUGCTQ9HAC7 445 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 NOD2Q9HC29 1040 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 TTC21BQ7Z4L5 1316 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 NOS1P29475 1434 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 KIF1BO60333 1816 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 LRRIQ3A6PVS8 624 aaPredicted RBP11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 BOLA2-SMG1P6H3BVE0 249 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 CHMP4BP1P59074 171 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 CNKSR1Q969H4 720 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 NOP53Q9NZM5 478 aaKnown RBP11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 CIDEBQ9UHD4 219 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 PRELID1Q9Y255 219 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 FIBPO43427 364 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 TRIM37O94972 964 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 ATP6V1G2O95670 118 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 VIMP08670 466 aaKnown RBP11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 HSPA4P34932 840 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 USH1GQ495M9 461 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 NUTM2DQ5VT03 806 aaPredicted RBP11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 NR1H4Q96RI1 486 aaPredicted RBP11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 GINM1Q9NU53 330 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 GOLGA6L4A6NEF3 574 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 KDM1AO60341 852 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 FUT4P22083 530 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 CDC25CP30307 473 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 TBC1D10BQ4KMP7 808 aaPredicted RBP11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 GIGYF2Q6Y7W6 1299 aaKnown RBP11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 LRRC49Q8IUZ0 686 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 SLC7A5P1Q8MH63 180 aa11.87□□□□□ -0.51
ERGIC3-201ENST00000279052 TCHHQ07283 1943 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 TMEM247A6NEH6 219 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 ZNF202O95125 648 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 LDHAP00338 332 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 CLTAP09496 248 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 SFPQP23246 707 aaKnown RBP eCLIP11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 KIF5BP33176 963 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 MLH1P40692 756 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 BPIFB4P59827 614 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 UBE2Q1Q7Z7E8 422 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 CLASRPQ8N2M8 674 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 JAKMIP1Q96N16 626 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 TNMDQ9H2S6 317 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 SLC5A4Q9NY91 659 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 SH3GLB1Q9Y371 365 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 ATP6V0A2Q9Y487 856 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 EFCAB6Q5THR3 1501 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 TARSL2A2RTX5 802 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 FANCGO15287 622 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 MTHFSP49914 203 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 EIF2B5Q13144 721 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 PARP10Q53GL7 1025 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 SRGAP1Q7Z6B7 1085 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 ZNF653Q96CK0 615 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 PNKPQ96T60 521 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 RABEP2Q9H5N1 569 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 PIDD1Q9HB75 910 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 HAUS2Q9NVX0 235 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 L3MBTL1Q9Y468 752 aa11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-201ENST00000279052 DPPA5A6NC42 116 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 RAPGEF3O95398 923 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 MCCD1P59942 119 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 XRCC4Q13426 336 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 NDNQ99608 321 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 EHD4Q9H223 541 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 CCDC68Q9H2F9 335 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 SYNCQ9H7C4 482 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 DDX19BQ9UMR2 479 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 ABCA9Q8IUA7 1624 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 MTRF1O75570 445 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 WDHD1O75717 1129 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 TCF7P36402 384 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 MATR3P43243 847 aaKnown RBP eCLIP11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 CCDC152Q4G0S7 254 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 TMEM132EQ6IEE7 984 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 RSPH3Q86UC2 560 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 WDR75Q8IWA0 830 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 DZIP1LQ8IYY4 767 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 UIMC1Q96RL1 719 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 BCL2L13Q9BXK5 485 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 DMAP1Q9NPF5 467 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 RHBDL2Q9NX52 303 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 MROH1Q8NDA8 1641 aa11.85□□□□□ -0.51
ERGIC3-201ENST00000279052 CCT8P50990 548 aa11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 KANK3Q6NY19 840 aa11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 C14orf93Q9H972 538 aaKnown RBP11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 NRXN1Q9ULB1 1477 aa11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 SH3TC1Q8TE82 1336 aa11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 N4BP3O15049 544 aa11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 AKR1B10O60218 316 aa11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 PDGFRBP09619 1106 aa11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 ZSCAN22P10073 491 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 ENPP1P22413 925 aa11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 BDNFP23560 247 aa11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 POLE2P56282 527 aa11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 LBRQ14739 615 aaKnown RBP11.84□□□□□ -0.51
ERGIC3-201ENST00000279052 INAQ16352 499 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms